Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0481 ATGGGTTTCGACAAAGCAGTGGCGCCCTATATTCTCCTCGCCGCCATGCTGATCCTCGTGGGGCCAACCACGGCGCAGTTGAGCCCGACGTTCTACGACACCACATGCCCTAACTTATCCTCCATTGTAGAAGATGTAGTTAGACAAGCTCTCCAAACCGATGCCCGAGCAGGCGCAAAACTCATTCGCTTTCATTTTCACGACTGTTTTGCCAATGGTTGTGATGGATCTGTCCTATTGGAAGATTCAGTTGAAGACAACATAGACAGTGAGCAAAACGCTCCGGGAAATGAAGGAATACAAGGCCAAAATATTGTTGCCGACATCAAGACTGCAGTTGAAAATGTTTGTCCAAACCTAATCTCCTGTGCTGACATCTTAGCCATTGCATCTAATTCAGCTGTCGTCTTGGCCGGAGGAAGGGGTTGGGAGGTTCAACTAGGAAGAAGAGACAGTCTAATAGCAAATAGATCCGGAGCTGAAAGTAATCTTCCAAGTCCTTTTGAACCACTTGCAAATCTTACCGTCAAGTTTGCAAATGTTGGTCTTGATTCTACTGATCTTGTTGCTTTGTCCGGAGCGCACACATTCGGTCGTTCAAGATGCCAATTCTTCCAACGGCGATTGAACGACTTCAACGGAACAGGAATGCCTGATCCGAGTCTAGACCCAATCTACAGAGACGTTCTTTTGGAGGCATGTCCTGAAGGCGAAGACAACAATCGGGTAAACTTGGATCCGACAACTCCAGACGCATTCGACAACAATTATTTCACCAATCTCCAAGGAAACCGTGGGCTTCTTACCAGCGACCAAGTGCTGTTCTCCCCTGCCGGCGCCGCCACCGCCGGCGATGTGGACCGGTTCGCCGCCAGCCAAGATGTGTTCTTTGATGCCTTTGGAGCCTCCATGATTAAGATGGGAAATATTAGGCCTTTGACTGCAAATGATGGGGAGATTCGTTTGACTTGTTCTAGGATTAATCCTTTGCCTACTCTTGCTGATATGTAA 1011 48.07 MGFDKAVAPYILLAAMLILVGPTTAQLSPTFYDTTCPNLSSIVEDVVRQALQTDARAGAKLIRFHFHDCFANGCDGSVLLEDSVEDNIDSEQNAPGNEGIQGQNIVADIKTAVENVCPNLISCADILAIASNSAVVLAGGRGWEVQLGRRDSLIANRSGAESNLPSPFEPLANLTVKFANVGLDSTDLVALSGAHTFGRSRCQFFQRRLNDFNGTGMPDPSLDPIYRDVLLEACPEGEDNNRVNLDPTTPDAFDNNYFTNLQGNRGLLTSDQVLFSPAGAATAGDVDRFAASQDVFFDAFGASMIKMGNIRPLTANDGEIRLTCSRINPLPTLADM 336
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 4907348 4910703 + CePI673135_01g004810.1 Cec01g0481 193698
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0481 336 FunFam Peroxidase 30 173 - -
Cec01g0481 336 Gene3D - 31 328 - -
Cec01g0481 336 PANTHER PEROXIDASE 72-RELATED 16 326 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 PRINTS Plant peroxidase signature 101 114 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 PRINTS Plant peroxidase signature 36 55 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 PRINTS Plant peroxidase signature 120 130 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 PRINTS Plant peroxidase signature 60 80 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 PRINTS Plant peroxidase signature 244 259 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 PRINTS Plant peroxidase signature 302 315 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 PRINTS Plant peroxidase signature 186 198 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 PRINTS Plant peroxidase signature 260 277 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 PRINTS Plant peroxidase signature 139 154 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 Pfam Peroxidase 43 291 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 Gene3D Peroxidase, domain 2 165 307 - -
Cec01g0481 336 ProSiteProfiles Plant heme peroxidase family profile. 26 328 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 PRINTS Haem peroxidase superfamily signature 246 261 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 PRINTS Haem peroxidase superfamily signature 187 202 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 PRINTS Haem peroxidase superfamily signature 139 151 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 PRINTS Haem peroxidase superfamily signature 58 72 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 PRINTS Haem peroxidase superfamily signature 121 138 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g0481 336 CDD secretory_peroxidase 26 327 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec01g0481 336 ProSitePatterns Peroxidases proximal heme-ligand signature. 187 197 IPR019793 -
Cec01g0481 336 FunFam Peroxidase 165 307 - -
Cec01g0481 336 SUPERFAMILY Heme-dependent peroxidases 26 329 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0481 Cec-Chr1:4907348 Cec02g2493 Cec-Chr2:42016362 2.10E-115 dispersed
Cec01g0481 Cec-Chr1:4907348 Cec04g1691 Cec-Chr4:36042104 1.40E-74 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0481 K00430 - csv:101215530 583.948