Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec01g0497 | ATGGTCTTCTGCAAAATGGCCCCTACTTCCCTCGCTTCCCGCTTCCGACAATCCGTCACCTCGACCGCACTCCGATCGTATGTCGCCGAGTTCATCTCCACCTTCTTCTACGTCTTCTCTGTCGTCGGAGCATCCATGTCCTCCCGGAAGTTTTTGCCGGGTGTTGTTGCTACGACAGACCCGTCGAGTCTTCTGATGGCCGCCATCGCCAATGCCTTCGCTTTGGCCTCGGCTGTTTACATTGCCGCCAACATCTCCGGCGGACATGTCAACCCGGCTGTGACGTTCGGAATGGCCGTGGCCGGCCATGTTAGTGTTCCCACTGCTCTCTTTTACTGGTTTGCTCAAATGCTTGCCTCTGTCATGGCCTGCATTGTTCTTAGAGCCACCCTTGTTGGACAGCGCGTTACAAGCTATGCCATCACTGAAGAGATGACGGGCTTCGGAGCGTCGGTGGTGGAAGGTGTATTGACATTTGCCCTAGTATACACCGTTTTCGCTGCCAGCGACTCAAGAAGAGGTCCGTGCAATGCGATTGGCGCTGTGATGATTGGGCTGATGGCTGGAGCCAATGTGCTGGCTGCCGGGCCATTTTCCGGTGGATCGGTGAACCCGGCATGCGCGTTCGGGTCAGCAATTGTGGCTGGGAGTTTCAAGAACCAGGCAGTGTACTGGGTTGGGCCATTGATTGGGGCGGCTTTGGCTGGAATTGTTCATGATAATGTGGTTTTTCCGGCTGAAAATGTAGATTCATTCAGAGGGGTTCCTGAGGCTGTTGTGGTGTAA | 786 | 54.83 | MVFCKMAPTSLASRFRQSVTSTALRSYVAEFISTFFYVFSVVGASMSSRKFLPGVVATTDPSSLLMAAIANAFALASAVYIAANISGGHVNPAVTFGMAVAGHVSVPTALFYWFAQMLASVMACIVLRATLVGQRVTSYAITEEMTGFGASVVEGVLTFALVYTVFAASDSRRGPCNAIGAVMIGLMAGANVLAAGPFSGGSVNPACAFGSAIVAGSFKNQAVYWVGPLIGAALAGIVHDNVVFPAENVDSFRGVPEAVVV | 261 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 5064271 | 5065481 | + | CePI673135_01g004970.1 | Cec01g0497 | 193714 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec01g0497 | 261 | Gene3D | Glycerol uptake facilitator protein. | 10 | 252 | IPR023271 | - | |
Cec01g0497 | 261 | PRINTS | Major intrinsic protein family signature | 185 | 207 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec01g0497 | 261 | PRINTS | Major intrinsic protein family signature | 222 | 242 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec01g0497 | 261 | PRINTS | Major intrinsic protein family signature | 25 | 44 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec01g0497 | 261 | PRINTS | Major intrinsic protein family signature | 71 | 95 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec01g0497 | 261 | PRINTS | Major intrinsic protein family signature | 108 | 127 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec01g0497 | 261 | PRINTS | Major intrinsic protein family signature | 153 | 171 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec01g0497 | 261 | SUPERFAMILY | Aquaporin-like | 18 | 247 | IPR023271 | - | |
Cec01g0497 | 261 | Pfam | Major intrinsic protein | 20 | 239 | IPR000425 | GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro) | |
Cec01g0497 | 261 | FunFam | Probable aquaporin TIP5-1 | 9 | 251 | - | - | |
Cec01g0497 | 261 | ProSitePatterns | MIP family signature. | 89 | 97 | IPR022357 | - | |
Cec01g0497 | 261 | PANTHER | AQUAPORIN-8 | 16 | 245 | IPR034294 | GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0497 | Cec-Chr1:5064271 | Cec09g0187 | Cec-Chr9:1663622 | 1.70E-48 | dispersed | |
Cec01g0497 | Cec-Chr1:5064271 | Cec04g1088 | Cec-Chr4:30392241 | 6.70E-45 | transposed |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec01g0497 | K09873 | - | csv:101214078 | 444.891 |