Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0497 ATGGTCTTCTGCAAAATGGCCCCTACTTCCCTCGCTTCCCGCTTCCGACAATCCGTCACCTCGACCGCACTCCGATCGTATGTCGCCGAGTTCATCTCCACCTTCTTCTACGTCTTCTCTGTCGTCGGAGCATCCATGTCCTCCCGGAAGTTTTTGCCGGGTGTTGTTGCTACGACAGACCCGTCGAGTCTTCTGATGGCCGCCATCGCCAATGCCTTCGCTTTGGCCTCGGCTGTTTACATTGCCGCCAACATCTCCGGCGGACATGTCAACCCGGCTGTGACGTTCGGAATGGCCGTGGCCGGCCATGTTAGTGTTCCCACTGCTCTCTTTTACTGGTTTGCTCAAATGCTTGCCTCTGTCATGGCCTGCATTGTTCTTAGAGCCACCCTTGTTGGACAGCGCGTTACAAGCTATGCCATCACTGAAGAGATGACGGGCTTCGGAGCGTCGGTGGTGGAAGGTGTATTGACATTTGCCCTAGTATACACCGTTTTCGCTGCCAGCGACTCAAGAAGAGGTCCGTGCAATGCGATTGGCGCTGTGATGATTGGGCTGATGGCTGGAGCCAATGTGCTGGCTGCCGGGCCATTTTCCGGTGGATCGGTGAACCCGGCATGCGCGTTCGGGTCAGCAATTGTGGCTGGGAGTTTCAAGAACCAGGCAGTGTACTGGGTTGGGCCATTGATTGGGGCGGCTTTGGCTGGAATTGTTCATGATAATGTGGTTTTTCCGGCTGAAAATGTAGATTCATTCAGAGGGGTTCCTGAGGCTGTTGTGGTGTAA 786 54.83 MVFCKMAPTSLASRFRQSVTSTALRSYVAEFISTFFYVFSVVGASMSSRKFLPGVVATTDPSSLLMAAIANAFALASAVYIAANISGGHVNPAVTFGMAVAGHVSVPTALFYWFAQMLASVMACIVLRATLVGQRVTSYAITEEMTGFGASVVEGVLTFALVYTVFAASDSRRGPCNAIGAVMIGLMAGANVLAAGPFSGGSVNPACAFGSAIVAGSFKNQAVYWVGPLIGAALAGIVHDNVVFPAENVDSFRGVPEAVVV 261
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5064271 5065481 + CePI673135_01g004970.1 Cec01g0497 193714
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0497 261 Gene3D Glycerol uptake facilitator protein. 10 252 IPR023271 -
Cec01g0497 261 PRINTS Major intrinsic protein family signature 185 207 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec01g0497 261 PRINTS Major intrinsic protein family signature 222 242 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec01g0497 261 PRINTS Major intrinsic protein family signature 25 44 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec01g0497 261 PRINTS Major intrinsic protein family signature 71 95 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec01g0497 261 PRINTS Major intrinsic protein family signature 108 127 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec01g0497 261 PRINTS Major intrinsic protein family signature 153 171 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec01g0497 261 SUPERFAMILY Aquaporin-like 18 247 IPR023271 -
Cec01g0497 261 Pfam Major intrinsic protein 20 239 IPR000425 GO:0015267(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec01g0497 261 FunFam Probable aquaporin TIP5-1 9 251 - -
Cec01g0497 261 ProSitePatterns MIP family signature. 89 97 IPR022357 -
Cec01g0497 261 PANTHER AQUAPORIN-8 16 245 IPR034294 GO:0006833(PANTHER)|GO:0015250(PANTHER)|GO:0016020(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0497 Cec-Chr1:5064271 Cec09g0187 Cec-Chr9:1663622 1.70E-48 dispersed
Cec01g0497 Cec-Chr1:5064271 Cec04g1088 Cec-Chr4:30392241 6.70E-45 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0497 K09873 - csv:101214078 444.891