Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0511 ATGGGCATTGACGTGGATGCTCGAACGGCAACGGGGATGAAGATGGAGAGATCTCTTTTATATATACATATCTCCAAACAAGAAGAAGTCAGCAACAATTTTCTGCAATCACTAAGCTCCGCCAATTTCAGCAGAATGGGTGTTGAAAATTACCATGTAATCGAGCTGGTTGGGGAGGGGTCTTTTGGTAAAGTGTATAAGGGGAGGCGGAAGAACACAGGCCAGACCGTGGCAATGAAGTTCATTATGAAGCATGGAAAAAGCGAGAAAGACATTCATAATTTAAGACAGGAGATTGAGATATTAAGAAAGCTGAAGCATGAAAATATCATTGAAATGCTCGATTCCTTTGAAAGCCCGCAAGAGTTTTGTGTTGTCACAGAATTTGCACAAGGCGAACTTTTTGAGATCCTTGAGGATGATAAATGCCTTCCTGAAGAGCAAGTTCAAGCAATTGCAAAACAGTTGGTAAGAGCATTACACTATTTGCATTCTAATCGTATCATCCACCGTGATATGAAGCCCCAAAACATTCTTATTGGAGCTGGATCTGTTGTGAAGCTTTGTGATTTTGGGTTTGCTCGAGCAATGTCGACAAATACCGTCGTTTTGCGGTCTATAAAAGGCACTCCTTTGTACATGGCTCCAGAATTGGTCCGTGAACAACCCTATAATCACACTGCAGACCTGTGGTCATTGGGAGTGATATTGTATGAGTTGTTTGTTGGCCAACCTCCATTTTACACTAACTCTGTGTATGCATTGATTCGGCACATTGTAAAGGATCCAGTTAAGTATCCTGACAATATGAGTTCAAGTTTCAAGAGCTTTTTGAAGGGATTACTCAACAAGGTACCTCAAAATCGACTCACATGGCCTGCTCTTCTGGAACATCCTTTTGTTAAAGAAACTTCAGATGAGCTGGAAATGAAGGAGTTGCATGCTACATCTGTTGCAACCAGAGCGTGCAATCCAACTTGGAGGGGAGACGGAAATGCTAGTCTTGCTTCAATCGTCTCCAGTCCTGGGGGTAAAAGTGATGCTCCAGCTGGTTTCCAGGACAAGAGCACTGTCAACCCCCCCAATGGTCAGCTTAACAGTCCAAACTCGTTGACAGGAAATAATTCCCATCTTGAGGAGTTCCCAGGGTTTGTAAGTTCCAATGATGTTAAACATTCAGGTTGTCAGATATTGGACAAATTGGAAGATAGCTCACGCACCGTGAAAGGTGCACAAGTTATTAGCCAAGACACTGAAGCATTAACCCACATTTTGCGACAATTACAAAGATGGTCTGAAATGTCCCAGAACTCTTGCAGGGAGCAAACTATACTTTGTTCAAGCCAATCATTGAGAATCCTTTCAAACTTAGCAGCTGCTGGAGCCATTCAATGCACTGGGCGATGTGATGAAGTTACACATGAACTTCTTGTATTCACTAGCATTATTGTAAACCTGAAATTGGTTGAAGTTAATGATTTAATAATAAAGAGTTTTTCAATTGTTAGAACATTGGTGAGTAAGTCTGGAGGTGCTATGGGAAGCTTGAGCTTTAGAAACTGGGTCACGTTGGCGGAAATATTCTCCCAGGTTATATGTTCTAGCGGAGATTTATCTGGAGAAGTTGTGTGTGAATCCACTGCTTGTGTCGCTGTTATGTTATCTAAAGTAGCTCTAGGTCTTAAAGCATCTTCTTCCTGCTCAGGTCCTGAGGTAGTTTGTGCTCCGAATGAAATATTGAGAAAGATTTTGGAACATGCCAAGACATCTGGTTTGGTAGATCATTTGTGTCTCTGCTTAGCTACTTCAGGAGCAAGCCTTATTTCAGGTTCTTCAATTCTACTGCGAGCTGCTTGTGAAGCTTGTAGAGCTATTTGGTCATTGATAGAGTCACTCGAAGTTCTTTTTGTGAAGGAGAACACTTATTTATTTCCCCTGAATGCTTTTAGAAGTCCTTCTCTACTCCGGCTTGACATTAGGGATCATGAAAAGGGATCCTTACAGGGATCAGATTCAACAAAAGTTGTTGACACAGTGACCAGGGCATTTCTTAAATCAAATGCAATACAGGTTTCTATTTACTATTGCCTCCATCAACGACATGAAGCTGCCTTGTCTTCTTGTATTCAGATTCTCCTCAGATGCTGCCTGCATAATGGAATTGTTCCGGGTGTTCTTTGTGGTTTGCCTAGTTCTCTTCCTGTAACTACTGTTGTTAGTGGCGGAGGGGATGGTACTATAGTAGCAGAAGCATTCAATGTATTATCTCTATGTATTTCAGTTTTAAATAAAGATTCACAAACAGGTGATGCGAGTAACTTGAAGTGCAAGTTAGTCAATCCTTCGTCCTTGGTTATGCATTCATGCCTCCTCCTAGCTACAGTTGCTCAATGTTTAAAGTCAATGGGGAGAAATTCTGCATTATTTATGTTGACCACCTCTCCGAAAAGACAGCTCTCACGACTCACAGTCCTTGCCCATAGTTTTTCTTCTGATGATAAGATAAGAAATGCTATTTTACCTCATTGTGCATCTGGCATGTTGGCTCTTGCATCCATTCTTAGGCTTGAAATTGGAGCTTCAGTTGAGTCTTCAGTTTCTGAAATATCTATTCCTCTAATTCCCAGAACAGCAACACTATGCGATTATCTCAAAATTTCATCACTAGGCAGCAATGATGGGCATGCAAATGACTTTGGTCAATTCCTTTCACACTGGCACGGCTACATGGATGGATGTGTTGGCTTATTAGAGGCTAGGCTGAGGTGGGGTGGACCTCTAGCTGTTCAACAGTTGTGTGCTAGTAATATACCTCACTTGCTTGTTAATATGCTGGCCAAAAATGGTTCAAGTGCTCCTCATGGAATGGATATCAAGGACGATCAAGTTGGGCTGTCACCTATTGGGCTTGTATGGACTGTTTCATCAATATCCCATTGCCTTTTAGGCGGGAGTTTAACTTTCCGTCAGATTTTAATTAGGAATGATAATGTCAAGCTCATGTCTGACTTGATATCTGATGCTCATCTCAAGCTCGTTAAGAGTTGGGGTGGGCCTGGTGGAGGAAAGAGTGGAGTCAGAGACATAATAAACGTGGTAATTGATCTTCTTGCATTTCCTTTGGTTGCTGTACAAAATGCTCCAGGCTTGCCGTCTGCCACTGCTTCTGTGAACAGTGGGTTCCTACTCAACATGGGTTCACCAGGCGGGAGAGTTTGCATGGATGACAAGGATCTGGTGAAAGCTATAGAGGACGACTTGGGGAAATATATTAAAATTCTTTTAGAGGTGGGAGTGCCTGGAGTTGTCATTCGATGTTTGGAATATTCGGAGTTCAAGGATATTGGAAGGCCTGTTGCCTTTCTTGCTAAAATGATCAGCCATCGACCTCTGGCCGTTCAACTTGTAGGTAAAGGGCTGTTGGATGCAAATAGGATGAGACGGCTGCTCGACACTTCAAATTCAAAGGAGATTTTACTGGATATTTTAATGATTATTTCTGATCTAGCTCGTATGGATAAGGCATTTTATGAATATATCAACGGAGCATCTATTTTGGAGTTTCTAAAGGAATTCCTTGCACATGAAGATCCAAATATACGAGCAAAGGCTTGCAGTGCCCTGGGAAATATGTGTCGGCATAGTTCTTACTTTTATGGTTCCTTGGCAAGGTATGAAATAATCAATCTTCTAATTGATAGATGCTCTGATGCAGACAAACGAACGAGAAAGTTCGCATGCTTTGCTATCGGAAATGCTGCCTACCATGATGACACATTGTATGGAGAGCTCAGGAGATCGATACCTCAGCTAGCAAATTTACTGGTATCATCTGAGGAAGACAAAACAAAAGCAAATGCGGCAGGTGCACTAAGTAACCTTGTTCGCAACTCCAACATGCTATGTGAGGATATAGTTTCCAGAGGGGCCATGCAGGCTTTGTTAAAGTTGGTGGCGGACTGTTCGGCAGTAGCCTTGAACCCAAGCAGAAAAGATGCAGCAAATGAGTCTCCTCTCAAGATAGCCTTGTTTTCCTTGGCAAAGATGTGCGCACACGCACCCTGCCGACAGTTCCTTCTTTCATCAAAGCTATTTCCAGTGATTGGGCAGCTTCGGCAATCCCCAGAGTCGACAATCGCCAAATATGCCTCTGTGATTGTCAGCAAGAGCACCTCGAAGTCGCCGGCTGCCAAGTTCTTCTGTCATCTTCTCCGAGAGATGATGGAGAATATGAGATGTTCAATATTTAGAGGTATTGCAAGTGATTTCCGAGGAAGAGCTTCCTGTTATAAACAAGATTGGATTGGTGGCCTACGTTCAGGAATCGGGATTTTGGCGCCAACCACGTACATTTTTTTTGCTTCCGCGCTGCCCGTCATTGCTTTTGGCGAGCAATTGAGTAGGAACACAGATGGAAGCTTAAGCACAGTTGAAACTTTGGCTTCAACAGCCATTTGTGGGATTCTTCACTCCATTTTTGGTGGCCAACCTCTTCTTATTGTAGGAGTTGCTGAACCCACCATTGTTATGTACACTTATTTGTTCAACTTTGCAAAAGATAGGAAAGATTTGGGAATAGAACTCTTCCTTGCTTGGGTTGGATGGGTTTCCGTGTGGACGGCTATGTTATTGATGCTTTTGGCAATATTCAATGCCTGTAGTCTAATCAACAGATTTACAAGAATTGCAGGAGAACTTTTTGCCATTTTGATTTCTGCTTTGTTCATTCAAGAAGCTATCAAGGGAGTTGTAAGTGAGTTTAAAATTCCCAAAGCAGAGAATCCAAATATGGAGAGATATGAATTTCATTGGCTTTACACAAATGGATTGCTTGGAATCATATTTACTTTTGGAGTTTCATATTCTTCTTTGAAGAGCAGAAAGGCAAGGTCATGGTTATATGCCACAGGGTGGTTGAGAAGCTTCATTGCAGACTATGGAGTTCCTCTCATGGTTGTAGTATGGACTGCATTATCATCCAGTGTCCCAACAAAAATTCCTTCTGGAGTTCCTAGAAGACTTGTAAGCCCTTTGCCATGGGAATCTGCTTCTTTGTACCATTGGACTGTGGTCAAGGATATGGGGAAAATCCCTCCCTCATACATATTTGCAGCTCTTCTCCCTGCTGTGATGATTGCAGGCCTTTACTTTTTTGATCATAGTGTTGCTTCTCAATTGGCACAACAAAAGGAGTTTAATCTCAAGAATCCTGCAGCATATCACTATGACATCTTCTTGCTTGGTTTTATGACTTTACTTTGTGGATTACTTGGGCTTCCTCCCTCAAATGGGGTTTTACCACAGTCTCCAATGCATACTAAAAGCCTTGCAGTTCTTAAGGGGCAGTTGATAAGAAAAAAGATGGTTGAAAGTGCTAAGGAAAGCATAAAAAGAAAAGCTACAAACTCAGAAATCTATGTCCAAATGCAAGATGTGTTCATAGAAATGGATGGTAGCCCAGCTGTTAGTCCACTAGAGATGGATGTAGTGGTGAAAGAATTGGAAGATTTGAAGGAAGCAGTTATGAAAGAAAACAACAACAAAGAAAATGAAAATGAAGAAGAGAAATTTGGTCATCTTGAGAAGCACATTGATTCATATCTTCCAGTTAGAGTAAATGAGCAAAGAGTGAGTAATCTGCTACAGTCAGTCCTAGTGGCTTCATTAATTTTTGCAATACCATTGGTCAAGAAGATCCCAACATCTGTGCTTTGGGGATATTTTGCTTATATGGCCATTGATAGTCTTCCTGGAAACCAATTTTGGGAAAGGATTTTGCTCCTCTTCGTCATGCCTAGTCGACGTTACAAGGTGCTAGAAAATGCTCATGCTTCCTTTGTGGAGTTGGTGCCATTCAAATACATAACCATATTCACTCTCTTTCAACTTGTGTATCTTCTTCTTTGCTATGGAGTGACTTGGATCCCTATAGCTGGAGTCTTGTTTCCCTTACCTTTCTTCTTCCTCATTACCATAAGACAACACATTCTTCCCAAAGTACTCCGATCTCGATATTTGCAAGAGCTCGATGCAGCGGAATATGAAGAAATAAAGGGATCTCCGAAGACCTCGCTTAGTTTTTCTTTCAAGGGAAAGGATTCTACTCATATAGTTGAAGGTGGAGATGAGGTTGAAATGTGTGATGCTGAAATTCTAGATGTGTTGACAACCAATAGAGGGGAGTTGAAGATTAGAACAAGAAGCTTTAATGAAGATGGACATGGTCAGGTTTATCCTGAAATAGTTGAAATAGAATGA 6258 41.67 MGIDVDARTATGMKMERSLLYIHISKQEEVSNNFLQSLSSANFSRMGVENYHVIELVGEGSFGKVYKGRRKNTGQTVAMKFIMKHGKSEKDIHNLRQEIEILRKLKHENIIEMLDSFESPQEFCVVTEFAQGELFEILEDDKCLPEEQVQAIAKQLVRALHYLHSNRIIHRDMKPQNILIGAGSVVKLCDFGFARAMSTNTVVLRSIKGTPLYMAPELVREQPYNHTADLWSLGVILYELFVGQPPFYTNSVYALIRHIVKDPVKYPDNMSSSFKSFLKGLLNKVPQNRLTWPALLEHPFVKETSDELEMKELHATSVATRACNPTWRGDGNASLASIVSSPGGKSDAPAGFQDKSTVNPPNGQLNSPNSLTGNNSHLEEFPGFVSSNDVKHSGCQILDKLEDSSRTVKGAQVISQDTEALTHILRQLQRWSEMSQNSCREQTILCSSQSLRILSNLAAAGAIQCTGRCDEVTHELLVFTSIIVNLKLVEVNDLIIKSFSIVRTLVSKSGGAMGSLSFRNWVTLAEIFSQVICSSGDLSGEVVCESTACVAVMLSKVALGLKASSSCSGPEVVCAPNEILRKILEHAKTSGLVDHLCLCLATSGASLISGSSILLRAACEACRAIWSLIESLEVLFVKENTYLFPLNAFRSPSLLRLDIRDHEKGSLQGSDSTKVVDTVTRAFLKSNAIQVSIYYCLHQRHEAALSSCIQILLRCCLHNGIVPGVLCGLPSSLPVTTVVSGGGDGTIVAEAFNVLSLCISVLNKDSQTGDASNLKCKLVNPSSLVMHSCLLLATVAQCLKSMGRNSALFMLTTSPKRQLSRLTVLAHSFSSDDKIRNAILPHCASGMLALASILRLEIGASVESSVSEISIPLIPRTATLCDYLKISSLGSNDGHANDFGQFLSHWHGYMDGCVGLLEARLRWGGPLAVQQLCASNIPHLLVNMLAKNGSSAPHGMDIKDDQVGLSPIGLVWTVSSISHCLLGGSLTFRQILIRNDNVKLMSDLISDAHLKLVKSWGGPGGGKSGVRDIINVVIDLLAFPLVAVQNAPGLPSATASVNSGFLLNMGSPGGRVCMDDKDLVKAIEDDLGKYIKILLEVGVPGVVIRCLEYSEFKDIGRPVAFLAKMISHRPLAVQLVGKGLLDANRMRRLLDTSNSKEILLDILMIISDLARMDKAFYEYINGASILEFLKEFLAHEDPNIRAKACSALGNMCRHSSYFYGSLARYEIINLLIDRCSDADKRTRKFACFAIGNAAYHDDTLYGELRRSIPQLANLLVSSEEDKTKANAAGALSNLVRNSNMLCEDIVSRGAMQALLKLVADCSAVALNPSRKDAANESPLKIALFSLAKMCAHAPCRQFLLSSKLFPVIGQLRQSPESTIAKYASVIVSKSTSKSPAAKFFCHLLREMMENMRCSIFRGIASDFRGRASCYKQDWIGGLRSGIGILAPTTYIFFASALPVIAFGEQLSRNTDGSLSTVETLASTAICGILHSIFGGQPLLIVGVAEPTIVMYTYLFNFAKDRKDLGIELFLAWVGWVSVWTAMLLMLLAIFNACSLINRFTRIAGELFAILISALFIQEAIKGVVSEFKIPKAENPNMERYEFHWLYTNGLLGIIFTFGVSYSSLKSRKARSWLYATGWLRSFIADYGVPLMVVVWTALSSSVPTKIPSGVPRRLVSPLPWESASLYHWTVVKDMGKIPPSYIFAALLPAVMIAGLYFFDHSVASQLAQQKEFNLKNPAAYHYDIFLLGFMTLLCGLLGLPPSNGVLPQSPMHTKSLAVLKGQLIRKKMVESAKESIKRKATNSEIYVQMQDVFIEMDGSPAVSPLEMDVVVKELEDLKEAVMKENNNKENENEEEKFGHLEKHIDSYLPVRVNEQRVSNLLQSVLVASLIFAIPLVKKIPTSVLWGYFAYMAIDSLPGNQFWERILLLFVMPSRRYKVLENAHASFVELVPFKYITIFTLFQLVYLLLCYGVTWIPIAGVLFPLPFFFLITIRQHILPKVLRSRYLQELDAAEYEEIKGSPKTSLSFSFKGKDSTHIVEGGDEVEMCDAEILDVLTTNRGELKIRTRSFNEDGHGQVYPEIVEIE 2085
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5170315 5209130 - CePI673135_01g005110.1 Cec01g0511 193728
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0511 2085 FunFam Serine/threonine-protein kinase 36 48 338 - -
Cec01g0511 2085 MobiDBLite consensus disorder prediction 352 371 - -
Cec01g0511 2085 SMART serkin_6 51 301 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0511 2085 FunFam Aurora kinase A 44 133 - -
Cec01g0511 2085 Gene3D - 1119 1419 IPR011989 -
Cec01g0511 2085 Gene3D Helical hairpin bin 1426 1468 - -
Cec01g0511 2085 SMART arm_5 1257 1296 IPR000225 GO:0005515(InterPro)
Cec01g0511 2085 SMART arm_5 1173 1213 IPR000225 GO:0005515(InterPro)
Cec01g0511 2085 SMART arm_5 1298 1351 IPR000225 GO:0005515(InterPro)
Cec01g0511 2085 CDD STKc_STK36 49 301 - -
Cec01g0511 2085 PANTHER PROTEIN KINASE RELATED 48 1393 - GO:0005737(PANTHER)
Cec01g0511 2085 ProSiteProfiles Protein kinase domain profile. 51 301 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0511 2085 SUPERFAMILY Protein kinase-like (PK-like) 45 311 IPR011009 -
Cec01g0511 2085 Pfam Protein kinase domain 51 301 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0511 2085 Pfam HCO3- transporter integral membrane domain 1610 1780 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cec01g0511 2085 Pfam HCO3- transporter integral membrane domain 1870 2012 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cec01g0511 2085 Pfam HCO3- transporter integral membrane domain 1415 1592 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cec01g0511 2085 FunFam Serine/threonine-protein kinase TIO 1120 1389 - -
Cec01g0511 2085 Coils Coil 1827 1854 - -
Cec01g0511 2085 FunFam probable boron transporter 2 1426 1468 - -
Cec01g0511 2085 ProSitePatterns Protein kinases ATP-binding region signature. 57 84 IPR017441 GO:0005524(InterPro)
Cec01g0511 2085 MobiDBLite consensus disorder prediction 334 371 - -
Cec01g0511 2085 ProSitePatterns Serine/Threonine protein kinases active-site signature. 168 180 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g0511 2085 Pfam HEAT repeat 1185 1214 IPR000357 GO:0005515(InterPro)
Cec01g0511 2085 Gene3D Transferase(Phosphotransferase) domain 1 44 330 - -
Cec01g0511 2085 SUPERFAMILY ARM repeat 1087 1389 IPR016024 -
Cec01g0511 2085 Coils Coil 85 105 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0511 Cec-Chr1:5170315 Cec08g1349 Cec-Chr8:25407628 4.20E-259 dispersed
Cec01g0511 Cec-Chr1:5170315 Cec07g1406 Cec-Chr7:29629289 3.50E-298 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71674 PF00069 Pkinase 3.20E-78 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0511 K06228 - csv:101214975 2461.8