Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0523 ATGTCCGAAGCATCTCCCTCCGATCATAATCCCTCTCCCTCTGCTGCTAAGCTCCGCAAGATCCCTCCCATCCCCATTCGGCGCGATTCCATACCCAATGCCGGAGACTCCGATTCCGATCATGAAAACGATCCTCCCGAGGATCAACCTCTTCAACCTGACGATTCCTCCATCATTATGGCCTCATCTCTTGGGTTGAATCACATTCGTACGCGTTCTGCTCCTTTGCCGTTACGAACCTCTGCTGTTGGCACGCCCTCCAATTTGGGAGATAATTCTAGAAATAATGTTGTCTCCAGTGAGACCGAGTCCGAGCCAAAAGTTTCCTCCATTGAACAAGGAAAAAAAGTTCTGTGGAGTCAATCGAAATCGTTCAGATATCCTACATCTATGAATCATGATCTTGAGGGCAATCATGTAGCGTTTGGAAAGGAAATTCAGTCCCCACGGTTCCGTGCCATACTGCGTGTAACTAGTGGAAGAAGGAGGAGAACCCCGGATATCAAAAGCTTCTCTCACGAGCTCAATTCCAAGGGAGTTCGCCCTTTTCCACTTTGGAAACCTCGGGCATTTGGGCATTTAGAAGAGATCATGGTGGCTATCAGAGCAAAATTTGACAGATTGAAGGATGATGTTAATTACGAATTGGGCATTTTTGCTGGAGATCTCGTAGATATACTTGAAAAGAAAGACCAATCTCAGCCTGAACTAAAAGAGGGTTTGGAGGACTTATTGGTGGTTGCTCGGAAATGTGCGACAATGTCACCTACTGAATTCTGGACGAAAGGTGAAGGGATTGTCCAAAATCTAGACGATCGGCGGCAGGAGCTGTCGTTAGGGATTCTTAAGCAAACCCATACCCGCCTTCTCTTCATCTTGACACGATGTACTCGGCTTATTCAGTTCAGAAAGGAGAGTGGTTATGAAGATGAACACATTTTGGGTCTTCATCAACTTAGTGATCTAGGAATTTATCCAGAGAAACTTAGGCAGCTCGAAAAACTTGACTTTAGTGATCCATTGATTGTGAAAGAAGAAATTGAGCAGCAGCTAAAGTTGGTTGGTAAGGATCAAGCCAGTCGACTGGTGAAGCAAGATTTAGGCCAAAGTTTTAGTACTAGTGCTGGAAATGTCGAGCTGGACTCTTCCTTAAGTGTTGATTCATCTACAAGCATGTATAGGATGGCATCCTGGAAAAAGCTACCATCAGCAGCTGAGAAGAACCGGAAAGACTCTGACTCCACTGGAACACCTTCCAAGGATAAACTTGAACTGTTGCATGTACATGAAGCTAAGACCGGGAGCAATAACCAATTAGATACCCCATCTAGTCATATTGCGCATTCAGAAGCACCTCCTAAAGAACAAAAGGTATCTTGGGGAATATGGGGCTTTCATCAAAATGCCACTTTTGAGAATTTGATGATTTGTCGGATTTGTGAGGTTGAAATTCCGACCATTCATGTTGAGGAGCATTCTCGAATATGTACAATTGCTGATAGGTGTGATTTGAAAGGTTTAACTGTGAATGAGCGCCTTGAACGGGTTGCTACAGCTCTTGAAAAGATACTAGAGTCTTGGACGCCTAAAAGTACACCAAGAAGTTGTGATACTTCATGTGGAAATTTTGATACCGTCAAGGTTTCTACATCAAGTATGCAAGAAGAGGTTTTTGAGCTGTCATCTAAAGGAATCAATTTGTCAAGTCGAAACTCTGAAGATCTGCTTGATTCCCTCCCTGTTACTGGCAACTCCTCCTTCATGGAAAGTCAGGATATTTTTCCTGATTCATCAGACAATCGACCATTTATTTTCACACCAGATCACAGTACAAAATCAACGTCAGCTGGAACTCTAACACCAAGATCACCTCTTTTAACACCCAGATCCAGCCAGATTGAATTGTTGTTGCATGGACGAAGAGCAATATCTGAACTTGAAAATTATCAGCAGATTTACAAATTATTGGACATTGTTCGTTCCATTGCAAATGTTAACAACTCTGGATACGGTGCATTGGAGTCCATGCTTGATCGATTAGAGGACCTTAAATATGCAATCCAGGACAGGAAGGTGGATGCCCTTGTTGTGGAGACTTTTGGAAGGCGCATAGAGAAGCTCTTGCAGGAAAAATATGTGCATCTCTGTGGGCAAATTGAAGATGATAAAGTAGACTCTTCACATGGCATGGTTGATGAAGAGAGTTCAGTGGAAGATGATACTGTTCGTAGTTTGCGTGCAAGTCCTGTTAATACATCAAAAGATCGAACATCTATTGAAGATTTTGAAATAATTAAACCAATTAGTAGAGGGGCATATGGCCGAGTTTTTCTTGCGAGAAAAAGAGCAACTGGAGACTTGTTTGCAATAAAGGTTTTAAAGAAGGCTGATATGATTCGCAAGAATGCAGTTGAAAGTATTTTGGCTGAACGTAATATCCTTATCTCAGTTCGCAACCCTTTTGTGGTCCGCTTTTTCTACTCTTTCACATGTAGGGAAAATCTGTATCTGGTCATGGAATACTTAAATGGAGGTGATATTTATTCCTTGCTGAGAAACCTAGGGTGCTTAGATGAAGATATGGCTCGTATTTATATCGCTGAAATTGTTCTTGCTTTGGAGTATTTGCACTCCTTAAATGTGATTCACAGAGACTTAAAGCCAGATAACTTATTGATTGGTCAAGACGGTCACATTAAGTTGACAGATTTTGGGCTCTCCAAGATTGGTCTTATCAATAGTACAGATGATTTCTCAGGTCCATCAATCAGTGGAACTTCTTCACTTGGAGACAATGGACCAACATCTCAGTCTTTGTCAAAAAGAGAACACAGACAAAAGCATTCAGTGGTTGGTACTCCAGATTATTTGGCTCCTGAGATACTTCTGGGCATGGGACATGGTGTAACTGCGGATTGGTGGTCTGTTGGAGTAATTCTTTTTGAGATGCTTGTAGGAATACCGCCGTTCAATGCAGAAAATCCACAGCAAATTTTTGATAATATCATTAACAGAGACATACCGTGGCCCAAGGTGCCTGACGAGATGAGTTATGAAGCCCATGATTTGATTGACAAATTGTTGACTGAAAATTCAGTTCAAAGACTGGGAGCTACTGGAGCCAGAGAGGTGAAGGAACATCCTTTCTTCAAAAATATTAACTGGGAAACACTTGCAAGGCAGAAGGCCATGTTTATACCATCAGCAGAGCCACAGGATACAAGTTATTTCATGAGCCGTTATATATGGAATCCAGAAGATGAGGATTTTAATGGTGGAAGTGACTTTGATGATCATGATTTGACTGATACTTGCAGCAGTAGTTCATTTAGTAACCTACAAGATGAAGACGGAGACGAATGTGGTAGTTTGGCTGACTTCTGTACATCAGCTCTTTCTGTGAAGTACTCGTTCAGCAATTTCTCTTTCAAGAATTTATCACAACTGGCTTCCATCAATTATGATTTGGTTGTGAAGAGCAGTCAAAACTCACCAGATGTATCAAAACCATCCATTCCTTGA 3522 41.91 MSEASPSDHNPSPSAAKLRKIPPIPIRRDSIPNAGDSDSDHENDPPEDQPLQPDDSSIIMASSLGLNHIRTRSAPLPLRTSAVGTPSNLGDNSRNNVVSSETESEPKVSSIEQGKKVLWSQSKSFRYPTSMNHDLEGNHVAFGKEIQSPRFRAILRVTSGRRRRTPDIKSFSHELNSKGVRPFPLWKPRAFGHLEEIMVAIRAKFDRLKDDVNYELGIFAGDLVDILEKKDQSQPELKEGLEDLLVVARKCATMSPTEFWTKGEGIVQNLDDRRQELSLGILKQTHTRLLFILTRCTRLIQFRKESGYEDEHILGLHQLSDLGIYPEKLRQLEKLDFSDPLIVKEEIEQQLKLVGKDQASRLVKQDLGQSFSTSAGNVELDSSLSVDSSTSMYRMASWKKLPSAAEKNRKDSDSTGTPSKDKLELLHVHEAKTGSNNQLDTPSSHIAHSEAPPKEQKVSWGIWGFHQNATFENLMICRICEVEIPTIHVEEHSRICTIADRCDLKGLTVNERLERVATALEKILESWTPKSTPRSCDTSCGNFDTVKVSTSSMQEEVFELSSKGINLSSRNSEDLLDSLPVTGNSSFMESQDIFPDSSDNRPFIFTPDHSTKSTSAGTLTPRSPLLTPRSSQIELLLHGRRAISELENYQQIYKLLDIVRSIANVNNSGYGALESMLDRLEDLKYAIQDRKVDALVVETFGRRIEKLLQEKYVHLCGQIEDDKVDSSHGMVDEESSVEDDTVRSLRASPVNTSKDRTSIEDFEIIKPISRGAYGRVFLARKRATGDLFAIKVLKKADMIRKNAVESILAERNILISVRNPFVVRFFYSFTCRENLYLVMEYLNGGDIYSLLRNLGCLDEDMARIYIAEIVLALEYLHSLNVIHRDLKPDNLLIGQDGHIKLTDFGLSKIGLINSTDDFSGPSISGTSSLGDNGPTSQSLSKREHRQKHSVVGTPDYLAPEILLGMGHGVTADWWSVGVILFEMLVGIPPFNAENPQQIFDNIINRDIPWPKVPDEMSYEAHDLIDKLLTENSVQRLGATGAREVKEHPFFKNINWETLARQKAMFIPSAEPQDTSYFMSRYIWNPEDEDFNGGSDFDDHDLTDTCSSSSFSNLQDEDGDECGSLADFCTSALSVKYSFSNFSFKNLSQLASINYDLVVKSSQNSPDVSKPSIP 1173
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5345246 5355960 + CePI673135_01g005230.1 Cec01g0523 193740
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0523 1173 PANTHER SERINE/THREONINE-PROTEIN KINASE 471 1145 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cec01g0523 1173 Gene3D Transferase(Phosphotransferase) domain 1 846 1068 - -
Cec01g0523 1173 ProSitePatterns Serine/Threonine protein kinases active-site signature. 881 893 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g0523 1173 MobiDBLite consensus disorder prediction 923 937 - -
Cec01g0523 1173 MobiDBLite consensus disorder prediction 33 48 - -
Cec01g0523 1173 MobiDBLite consensus disorder prediction 433 452 - -
Cec01g0523 1173 Gene3D Phosphorylase Kinase; domain 1 760 1077 - -
Cec01g0523 1173 MobiDBLite consensus disorder prediction 923 948 - -
Cec01g0523 1173 CDD STKc_MAST_like 768 1055 - -
Cec01g0523 1173 FunFam probable serine/threonine protein kinase IREH1 760 849 - -
Cec01g0523 1173 SMART serkin_6 762 1050 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0523 1173 MobiDBLite consensus disorder prediction 78 107 - -
Cec01g0523 1173 MobiDBLite consensus disorder prediction 1 55 - -
Cec01g0523 1173 ProSiteProfiles Protein kinase domain profile. 762 1050 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0523 1173 MobiDBLite consensus disorder prediction 77 109 - -
Cec01g0523 1173 ProSiteProfiles AGC-kinase C-terminal domain profile. 1051 1153 IPR000961 GO:0004674(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0523 1173 Pfam Protein kinase domain 763 1050 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0523 1173 SUPERFAMILY Protein kinase-like (PK-like) 759 1080 IPR011009 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0523 Cec-Chr1:5345246 Cec01g1826 Cec-Chr1:32714375 2.30E-238 dispersed
Cec01g0523 Cec-Chr1:5345246 Cec03g1597 Cec-Chr3:34064320 1.90E-67 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71676 PF00069 Pkinase 4.80E-64 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0523 K08789 - csv:101210442 2087.38