Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0564 AGAGCTCATATGCAGCAGCAGCAGCAGATACAGTTGAGGCAGCAACTTCAGCAACAGACAATACAGCCTGTAAATGCTATGAAGCGGCCTCATGATGGTGGTGTGTGTGCTCGGCGGCTAATGCAGTACCTATACCATCAGCGTCAAAGGCCTGCTGATAATAGTATTGCCTATTGGAGGAAATTCGTGACTGAATATTATTCCCCTCGTGCAAAGAAAAGATGGTGTTTGTCATTATATAACAATGTTGGGCATCATGCACTTGGTGTCTTCCCTCAAGCAGCCATGGATGCATGGCAGTGTGACATTTGTGGTTCAAAATCAGGACGGGGATTTGAGGCTTCCTTTGAAGTGCTTCCTAGGCTTAATGAGATCAAATTTGGCAGTGGAGTCATTGATGAGCTATTGTTCTTGGATATGCCACGGGAATTCAGATATTCATCTGGAATCATGATGTTAGAATATGGAAAAGCAGTACAAGAGAGTGTATATGAGCAACTTCGTGTTGTTCGTGAGGGACAGCTTCGTATCATATTTACTCATGAATTGAAGATATTGGCATGGGAATTTTGTGCAAGACGCCATGAAGAACTTCTTCCTCGTAGACTGGTTGCACCTCAGGTGAATCAGTTGGTCCAGGTGGCACAGAAATGCCAGAGCACTATTGCTGAAGGAGGATCTGATGGGGCTTCTCAGCAGGATTTACAAGCAAATAGTAATATGGTTTTGACAGCTGGGCAGCAGCTTGCCAAGAGTCTGGAGTTGCAGTCACTGAATGATTTGGGGTTCTCTAAAAGATACGTCAGATGCTTGCAGATATCAGAGGTTGTCAATAGCATGAAAGATTTGATTGATTTCTGTAGGGAGCAGAAAACCGGACCAGTTGAGGGTCTGAAAAGTTATCCTCAGCACGCCACAGCCAAGCTGCAGATGCAAAAAATGCAAGAGATTGAGCAGGTTGCTACTGCTCAGAGTCTGCCAACCGACCGTAACACCCTTAATCGAATGGTCGCGCTGCATCCTGGGCTGAACAACCAAATGAATAGCCAAAGTCAACTAGTCGGCAGAGGAACTTTGAGTGGTTCAGCACAAGCTGCATTGGCATTGTCTAACTACCAGAATCTGCTAATGAGACAGAACTCCATGAATTCAACAAGTTCAAACCCACTCCAGCAGGAGACATCATCGTCATTCAATAACTCAAACCAGAGTCCTTCATCAAGCTTTCCTGGAACAACTGCTATAGCATCGGCACCGATGCAGACCTTGCCCAGCAGTGGTCTTTCAAGTCCCAATCTGCCTCAGCAGCAATCTCAAGTTCAACAGCAACTGCATCAGCGCCCAAACACCAACAACTTACTCGTGCAACATCATCCTCAGAGTACGCAAGGTAACAGTAACAATAACCAGGCTATGCAACATCAGATGCTCCAGCAACTACTCCAGATGTCTAATAACAGTGGGGGAGGACAACAGCAACCACTTTCTGGATCAAACACAAAAGCAAGCATTGCCGGAGCTTATACGGGATACGGAGGCAGCTCTTCTGTGGCGGCTGCAGGCACAGCCAATGCATCTGGTAGTAATATGCCTGCTCCAAGCCGAAGCAACAGTTTCAAAAGTGCTTCAACTGGTGACGTATCAGCAGCCGGTGCTCGTAGCAGTGGGTTCAACCAAAGAAGTGCAGATTTGGCACAAAATCTTCATTTGGATGAGGATATAATGCAGGATATAGCCCATGATTTTACAGATAATGGGTTTTTTAACAGTGATCTTGATGATAATATGTGCTTCACCTGGAAAGGTCAACTAACATAA 1818 45.54 RAHMQQQQQIQLRQQLQQQTIQPVNAMKRPHDGGVCARRLMQYLYHQRQRPADNSIAYWRKFVTEYYSPRAKKRWCLSLYNNVGHHALGVFPQAAMDAWQCDICGSKSGRGFEASFEVLPRLNEIKFGSGVIDELLFLDMPREFRYSSGIMMLEYGKAVQESVYEQLRVVREGQLRIIFTHELKILAWEFCARRHEELLPRRLVAPQVNQLVQVAQKCQSTIAEGGSDGASQQDLQANSNMVLTAGQQLAKSLELQSLNDLGFSKRYVRCLQISEVVNSMKDLIDFCREQKTGPVEGLKSYPQHATAKLQMQKMQEIEQVATAQSLPTDRNTLNRMVALHPGLNNQMNSQSQLVGRGTLSGSAQAALALSNYQNLLMRQNSMNSTSSNPLQQETSSSFNNSNQSPSSSFPGTTAIASAPMQTLPSSGLSSPNLPQQQSQVQQQLHQRPNTNNLLVQHHPQSTQGNSNNNQAMQHQMLQQLLQMSNNSGGGQQQPLSGSNTKASIAGAYTGYGGSSSVAAAGTANASGSNMPAPSRSNSFKSASTGDVSAAGARSSGFNQRSADLAQNLHLDEDIMQDIAHDFTDNGFFNSDLDDNMCFTWKGQLT 605
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 5848159 5859967 - CePI673135_01g005640.1 Cec01g0564 193781
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0564 605 Pfam LIM-domain binding protein 39 299 IPR029005 -
Cec01g0564 605 MobiDBLite consensus disorder prediction 381 446 - -
Cec01g0564 605 PANTHER LIM DOMAIN-BINDING PROTEIN 1 591 IPR029005 GO:0000122(PANTHER)|GO:0005634(PANTHER)|GO:0005667(PANTHER)|GO:0045944(PANTHER)
Cec01g0564 605 MobiDBLite consensus disorder prediction 522 556 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0564 Cec-Chr1:5848159 Cec05g0946 Cec-Chr5:8272061 4.20E-183 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0564 - - - 0.0