Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0586 ATGAGTGGCGGTGGCAGTGGCACTCCTCGAAGCACTAGGGATTTGATCTGCAACGCCGGTGCCGGTGCTGCCGCAGGTTCTATAGCAGCCACGTTCGTTTGCCCTTTAGATGTCATCAAGACGAGGCTGCAAGTGCATGGTCTTCCATCTGGTCAACGAGGAGGTAGTATTATTATCACTAGCCTACAAGACATAATGCGTTCTGAAGGTTTCAGGGGAATGTACCGTGGCCTTTCACCAACAATAGTAGCGCTTCTTCCAAACTGGGCTGTCTACTTCACAGTTTATGAGCATCTAAAAGGCCTACTTCATTCAGATGGGGACGATGGTCATCAACTCTCATTTGGGGAACATATGGTTGCTGCTGCTGGAGCTGGGGCATCTACTGCCATTGCAACAAATCCTTTGTGGGTTGTTAAGACAAGACTCCAAACACAGGGAATGAGGCCTGGTGTGGTTCCTTACACAGGCATGGTTTCAGCATTTACCAGGATTGTACAGGAAGAAGGAATTCGTGGGCTTTACAGTGGTATCATCCCTTCATTGGTTGGGATAAGTCATGTTGCAATTCAATTTCCTGCATATGAAAAGCTCAAATCGTATATGGCAGAAAGAGATAACACGACCATTGACAAGCTAAGTCCAGGACATTTAGCTATTGCCTCCTCGTTGTCGAAAATTACGGCCTCCGTAACTACTTACCCACATGAGGTAGTTCGTTCCCGGCTACAAGAGCAAGGCCAAGCCAGAAACGTTGCTCCTCAATACTCAGGAGTAATGGACTGTATCAAAAAGGTTTTTCGAAAGGAAGGTCTCCCCGGTTTTTATAGAGGTTGTGCGACGAATCTGTTGCGAACAACTCCATCCGCTGTAATAACTTTCACCAGCTATGAAATGATACATAGGTTCCTACTGCGAGTTATACCTTCAAGTGAGGAGAAATATTCCGAAACTCAACCGAATTCCGATAGCAATAGCCATGTGAAGCCCCAAAAGGGGATCAGAGACGACTCAAAGGAAGATAGTGATTCCAGCATACAACAATCACAATCCCAACCAAGTAAGCAAACTAGAATTCCTCTGGGGAATAAAGAACACTTAACATCTAGACATTGA 1116 45.79 MSGGGSGTPRSTRDLICNAGAGAAAGSIAATFVCPLDVIKTRLQVHGLPSGQRGGSIIITSLQDIMRSEGFRGMYRGLSPTIVALLPNWAVYFTVYEHLKGLLHSDGDDGHQLSFGEHMVAAAGAGASTAIATNPLWVVKTRLQTQGMRPGVVPYTGMVSAFTRIVQEEGIRGLYSGIIPSLVGISHVAIQFPAYEKLKSYMAERDNTTIDKLSPGHLAIASSLSKITASVTTYPHEVVRSRLQEQGQARNVAPQYSGVMDCIKKVFRKEGLPGFYRGCATNLLRTTPSAVITFTSYEMIHRFLLRVIPSSEEKYSETQPNSDSNSHVKPQKGIRDDSKEDSDSSIQQSQSQPSKQTRIPLGNKEHLTSRH 371
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6219264 6223250 + CePI673135_01g005860.1 Cec01g0586 193803
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0586 371 MobiDBLite consensus disorder prediction 329 343 - -
Cec01g0586 371 PRINTS Mitochondrial carrier protein signature 128 146 IPR002067 GO:0055085(InterPro)
Cec01g0586 371 PRINTS Mitochondrial carrier protein signature 31 45 IPR002067 GO:0055085(InterPro)
Cec01g0586 371 PRINTS Mitochondrial carrier protein signature 77 97 IPR002067 GO:0055085(InterPro)
Cec01g0586 371 PRINTS Mitochondrial carrier protein signature 18 31 IPR002067 GO:0055085(InterPro)
Cec01g0586 371 PRINTS Mitochondrial carrier protein signature 175 193 IPR002067 GO:0055085(InterPro)
Cec01g0586 371 PRINTS Mitochondrial carrier protein signature 222 244 IPR002067 GO:0055085(InterPro)
Cec01g0586 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 113 201 IPR018108 -
Cec01g0586 371 MobiDBLite consensus disorder prediction 344 363 - -
Cec01g0586 371 MobiDBLite consensus disorder prediction 314 371 - -
Cec01g0586 371 Pfam Mitochondrial carrier protein 212 305 IPR018108 -
Cec01g0586 371 Pfam Mitochondrial carrier protein 16 105 IPR018108 -
Cec01g0586 371 Pfam Mitochondrial carrier protein 112 204 IPR018108 -
Cec01g0586 371 SUPERFAMILY Mitochondrial carrier 14 299 IPR023395 -
Cec01g0586 371 Gene3D Mitochondrial carrier domain 4 106 IPR023395 -
Cec01g0586 371 Gene3D Mitochondrial carrier domain 107 314 IPR023395 -
Cec01g0586 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 13 102 IPR018108 -
Cec01g0586 371 MobiDBLite consensus disorder prediction 314 328 - -
Cec01g0586 371 ProSiteProfiles Solute carrier (Solcar) repeat profile. 213 303 IPR018108 -
Cec01g0586 371 PANTHER MITOCHONDRIAL NICOTINAMIDE ADENINE DINUCLEOTIDE TRANSPORTER 1-RELATED-RELATED 11 319 IPR044712 GO:0006862(InterPro)|GO:0022857(PANTHER)|GO:0035352(PANTHER)|GO:0051724(PANTHER)|GO:0055085(InterPro)|GO:0055085(PANTHER)
Cec01g0586 371 FunFam Nicotinamide adenine dinucleotide transporter 2, mitochondrial 14 304 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0586 Cec-Chr1:6219264 Cec09g0539 Cec-Chr9:4639565 3.80E-118 dispersed
Cec01g0586 Cec-Chr1:6219264 Cec09g1204 Cec-Chr9:12569511 1.80E-27 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0586 K15115 - csv:101216902 643.654