Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0635 ATGGGATTCGGATTGGGATTCGGATGGGAGGAGAAGAGTGTCGCGTTTACAGAAGAGGGAAGTGATGCGTTTAGAGAAGAGGGACGGGATTCGGATGGGAGGAGAAGAGTGTTACGTTTAGAGAAGAGGGAAGTGACGCGTTTAGAGAAGAGGGAAGTGATGCGTTTAGAGACGAGGGACGGGACCGATCCTTATGTCGTCGTCACAATGGGTGAGCAGAGGTTGAAGACCCGGGTGGTGAAAAATAATTGCAATCCTGAATGGAACGATGAGTTGACTCTTTCAATTGCAGATCTCAGGACTCCAATCGGTATATCAGTGTATGACAAAGACACACTAACAGACCATGACAAAATGGGAGATGCCGAGATCGACATCGAACCATACATCGAATGTTTGACAATGGGACTGGAGAGCCTCCCAGATGGGTGTGTGGTTAAGAGAGTATATCCAAAAAGAACAAACAATTTAGCTGATGAGAGCCAATGTGTTTGGCACAAGGGGAAAATTGTACAGAACATGTTCCTGAGGTTGAAGAATGTGGAGTGTGGTGAGGTAGCAATACAGCTCGAATGGATCGACGTTCCTGGTGCTAAGGGTTTGCCAGTCGGGGGTACAAGCAACTTCTGA 630 47.3 MGFGLGFGWEEKSVAFTEEGSDAFREEGRDSDGRRRVLRLEKREVTRLEKREVMRLETRDGTDPYVVVTMGEQRLKTRVVKNNCNPEWNDELTLSIADLRTPIGISVYDKDTLTDHDKMGDAEIDIEPYIECLTMGLESLPDGCVVKRVYPKRTNNLADESQCVWHKGKIVQNMFLRLKNVECGEVAIQLEWIDVPGAKGLPVGGTSNF 209
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6825989 6828970 + CePI673135_01g006350.1 Cec01g0635 193852
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0635 209 ProSiteProfiles C2 domain profile. 24 142 IPR000008 -
Cec01g0635 209 Pfam C2 domain 55 128 IPR000008 -
Cec01g0635 209 SMART C2_3c 42 138 IPR000008 -
Cec01g0635 209 Gene3D C2 domain 35 197 IPR035892 -
Cec01g0635 209 PANTHER PROTEIN C2-DOMAIN ABA-RELATED 4 47 199 IPR044562 -
Cec01g0635 209 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 56 187 IPR035892 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0635 Cec-Chr1:6825989 Cec07g0675 Cec-Chr7:11152760 1.90E-50 dispersed
Cec01g0635 Cec-Chr1:6825989 Cec01g1602 Cec-Chr1:30671446 1.20E-44 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0635 - - - 0.0