Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0636 ATGAAGAGGGAACATCACCATCTTCATCCCCGTCCGGAGCCGCTTTCCATGGCTGCCGTCCCTAATGGGGAGAGTTATTTGAACACCGGTAAGGCTAAACTCTGGGAGGAGGAAGCGCAGCTCGATGGAGGAGCGGATGAGCTTCTTGCTGTTTTGGGTTATAAGGTTAAGTCGTCGGACATGGCGGAAGTTGCTCAGAAGCTCGAACAGCTTGAAGAAGCGATGTGTCAAAATCAGGACACTGGCCTTTCGCATCTCGCTTTTGACACTGTTCATTATAATCCCTCTGATCTGTCAACTTGGCTTGAAAGTATGCTCATGGAGCTCCATCCGACGCCTAATTTTCCGCTGCCACCTCCTTCGCAGCTGGACGATTCGTCGTTTTTAGCTCCGGCGGAATCCTCCACCATCACTTCCATTGATTACGACCCCCAACGGCAAACCAGCAACCGGATTTTCGAGGAATCTTCTAGTTCTGATTTCGACCTTAAAGCTATCACAAGCAGCGCGATTTATTCACCGAGAGAGAATAAACGTTTGAAATCCTCTGAGTCGGACTCGGACTTGTTCTCCACCTCGGCGATTGGGGCTTCCGATTCTGTAACTCGCCCGGTCGTCCTCGTCGATTCGCAGGAGAATGGAATTCAACTGGTTCATGCTCTGATGGCTTGTGCCGAAGCTGTACAGCAGAACGATCTGAATCTAGCGGAGGCTCTGGTGAAGCGAATCGGTTACTTGGCGATTTCTCAAGCCGGAGCGATGAGGAAGGTCGCCACGTTCTTCGCCGAAGCGTTGGCACGCCGAATCTACAGGCTCCGCCCTGAGAATCCCCTTGATCATTCAGTGTCCGATAGGCTTCAGATGCATTTCTACGAGAGCTGTCCATATCTGAAATTCGCGCATTTCACCGCGAATCAAGCGATTCTCGAAGCCTTCGAAGGGAAGAAGCGTGTTCACGTAATCGATTTCTCGATGAACCGAGGGATGCAGTGGCCGGCTCTGATTCAAGCCCTAGCTCTACGGCCGAACGGTCCTCCAGCCTTCCGCCTCACTGGAATTGGCCCTCCGGCGCCGGATAACTCAGATTACCTCCAAGAAGTGGGCTGGAAACTCGCTGAATTGGCCGAAGCTATCCATGTGGAGTTCGAGTACAGAGGATTTGTAGCGAATAGCTTGGCGGATCTGGACGCATCGATGCTGGAGCTCCGGCCGAGCGAGGTGGAATCGGTGGTGGTGAACTCAGTGTTTGAGCTGCATAAGTTACTCGCTCGGCCTGGTGCCCTCGAAAAGGTTCTGTCGGTGGTGAAGCAGATGAAGCCGGAGATCATAACGGTGGTGGAGCAGGAAGCGAACCACAACGGTCCGGTTTTCGTGGACCGGTTCACTGAGTCACTCCATTACTACTCGACGCTTTTTGACTCGTTGGAAGGCTCCCCCACCAACCAAGACAAGATCATGTCCGAAATGTACCTTGGGAAGCAAATTTGCAACGTTGTGGCTTGTGAAGGCGCGGACCGAGTGGAACGTCACGAGACCCTGACTCAGTGGCGGACTCGGTTGTCCTCTGCCGGGTTCGAACCAATCCACCTTGGCTCGAACGCATTCAAGCAAGCTAGTATGCTCCTCGCCCTATTCGGCAGCGGAGAAGGCTACCGGGTGGAAGAAAACAACGGATCACTAATGCTAGGGTGGCACACTCGCCCCCTCATCGCCACATCCGCCTGGAAACTCGGCAACGAGCCTGTGGTCGCTCACTGA 1758 53.58 MKREHHHLHPRPEPLSMAAVPNGESYLNTGKAKLWEEEAQLDGGADELLAVLGYKVKSSDMAEVAQKLEQLEEAMCQNQDTGLSHLAFDTVHYNPSDLSTWLESMLMELHPTPNFPLPPPSQLDDSSFLAPAESSTITSIDYDPQRQTSNRIFEESSSSDFDLKAITSSAIYSPRENKRLKSSESDSDLFSTSAIGASDSVTRPVVLVDSQENGIQLVHALMACAEAVQQNDLNLAEALVKRIGYLAISQAGAMRKVATFFAEALARRIYRLRPENPLDHSVSDRLQMHFYESCPYLKFAHFTANQAILEAFEGKKRVHVIDFSMNRGMQWPALIQALALRPNGPPAFRLTGIGPPAPDNSDYLQEVGWKLAELAEAIHVEFEYRGFVANSLADLDASMLELRPSEVESVVVNSVFELHKLLARPGALEKVLSVVKQMKPEIITVVEQEANHNGPVFVDRFTESLHYYSTLFDSLEGSPTNQDKIMSEMYLGKQICNVVACEGADRVERHETLTQWRTRLSSAGFEPIHLGSNAFKQASMLLALFGSGEGYRVEENNGSLMLGWHTRPLIATSAWKLGNEPVVAH 585
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 6840444 6842201 - CePI673135_01g006360.1 Cec01g0636 193853
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0636 585 MobiDBLite consensus disorder prediction 1 21 - -
Cec01g0636 585 Pfam Transcriptional regulator DELLA protein N terminal 46 113 IPR021914 -
Cec01g0636 585 Coils Coil 54 74 - -
Cec01g0636 585 FunFam DELLA protein GAI 44 109 - -
Cec01g0636 585 PANTHER OSJNBA0084A10.13 PROTEIN-RELATED 181 575 IPR005202 GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(PANTHER)|GO:0009723(PANTHER)|GO:0009737(PANTHER)|GO:0009863(PANTHER)|GO:0009867(PANTHER)|GO:0009938(PANTHER)|GO:0010187(PANTHER)|GO:0042538(PANTHER)|GO:0043565(PANTHER)|GO:2000033(PANTHER)|GO:2000377(PANTHER)
Cec01g0636 585 ProSiteProfiles GRAS family profile. 208 576 IPR005202 -
Cec01g0636 585 Pfam GRAS domain family 217 576 IPR005202 -
Cec01g0636 585 Gene3D - 44 109 IPR038088 -
Cec01g0636 585 SMART DELLA_2 46 119 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0636 Cec-Chr1:6840444 Cec03g0851 Cec-Chr3:10419447 5.10E-194 dispersed
Cec01g0636 Cec-Chr1:6840444 Cec02g2110 Cec-Chr2:38678140 4.70E-46 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28869 PF03514 GRAS 2.70E-135 CL0063 Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0636 K14494 - csv:101204164 1077.77