Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec01g0701 | ATGGTTTTGTCCAAAACTTTCTCTGAATCCGATGTTTCCATACATTCCACATTTGCCTCTCGCTACGTTCGGGACTCTGCTCCAAGGTTCACCATGCCCGACAACTCCATGCCCAAGGAGGCCGCCTTCCAAATCATCAACGACGAGCTCATGCTCGACGGCAACCCAAGGCTGAATCTAGCCTCCTTCGTCACTACTTGGATGGAGCCCGAATGCGATAAGCTCATCATGGACTCTGTCAACAAGAACTACGTGGACATGGACGAGTACCCTGTCACCACCGAGCTTCAGAACCGCTGCGTCAACATGATTGCCCATCTCTTCAACGCCCCCTTGGGAGACTCCGACACCGCCGTCGGAGTTGGGACGGTGGGGTCGTCGGAGGCCATCATGCTGGCGGGGCTTGCCTTCAAGAGGAAGTGGCAGAACAGGCGGAAAGCAGAGGGGAAGGCTTATGAGAAGCCCAATATTGTGACGGGTGCCAATGTGCAAGTTTGTTGGGAGAAATTTGCGAGATACTTTGAAGTTGAGCTGAAGGAAGTTAAGGTGAGAGAAGGGTATTACGTGATGGACCCTGTTCAAGCGGTTGAGATGGTGGATGAGAATACCATCTGCGTTGCAGCCATTTTGGGGTCAACTTACAATGGTGAATTCGAAGATGTGAAGCTGTTGAATGATTTGTTGGTGGAGAAGAATAAGGAAACTGGATGGGATACTCCCATTCACGTGGATGCGGCCAGCGGTGGGTTCATAGCGCCGTTTCTGTATCCAGAGCTTGAATGGGACTTCAGGCTTCCTCTGGTGAAGAGCATCAATGTGAGCGGCCATAAGTATGGGCTTGTCTACGCTGGAATTGGTTGGGTGATTTGGAGAACCAAACAAGATCTCCCCCAAGAACTCATTTTCCATATCAATTACCTTGGAGCGGACCAACCCACCTTCACTCTCAACTTCTCCAAAGGGTCAAGCCAAATCATTGCGCAGTATTACCAACTAATCCGATTGGGTTTCGAGGGATATCGGAATGTGATGCAAAATTGTCACGACAATGCAATGGTGCTGAAGGAAGGGCTTGAAAACACAGGGAGGTTCACCATAGTTTCAAAGGACATGGGAGTGCCGGTGGTGGCGTTCTCCCTCAAAGACCGGAGCCGGCACGACGAGTTTGAGGTATCGGAGATGTTGCGGCGGTTTGGGTGGATTGTGCCGGCGTATCCAATGCCGGAAGGGGCGAAACACGTATCAGTTCTTCGTGTGGTGATAAGAGAAGATTTCTCTCGCACGCTTGCGGAGCGGCTTGTGCTTGATATTGTAAAGGTTTTGGCTGAGTTAGATACTCTTCCACCAAAGAATGGTGGAAATGAAACGGGTGGAAAGAAGAGGGTAGAGGAAACAGAGAGGGAAATAGCGACTTATTGGAGGAATATAACGAAGGCTAGGAAAATCAAGCTTGCTGCTAATCAAGATGGTCCTTCAGTTACCGTCATTGCCAACCCATGTGGTGATATTTATAGGAATCACTTTGTTTCTCCGAATTATCTTTCTTATTATTGCAATCTTTCTGATCGGAGAAATAGCGAAATGGGTTCTCAGGAAGACGACCGAGCAATCTTGGAGGAGGGTCTTTTGCAGAATGAAAGCAATGGACTGTATACAGGCGATGGCTCAGTTGACTTCCATGGGAATCCTGTTCTCAAGCAAAATACAGGAAACTGGAAAGCATGCCCATTCATTCTAGGGAATGAAGGCTGTGAGAGATTGGCCTACTATGGGATTTCAACTAACCTTGTTACTTATCTTACAAATAAACTACATCAAGGAAATGTATCAGCTGCTAGAAACGTCACTACTTGGCAAGGAACTTGTTATCTTACACCCCTTATTGGAGCTATATTGGCAGATGCATACTGGGGAAGATATTGGACAATTGCTGCTTTTTCAACAATTTATTTCATTGGAATGTGTACATTAACTCTCTCTGCGTCTGTTCCTGCTCTAAAGCCTGCTGAATGTGTTGGGTTTATGTGCCCCCCAGCTTCTTCTGCTCAGTATATTGTATTTTTCCTTGGACTCTATTTGATTGCCCTTGGGACCGGTGGAATCAAACCATGTGTGTCATCCTTTGGAGCAGATCAGTTTGATGATACTGATCCTGCCGAAAGGGTTAAAAAGGGCTCATTTTTCAACTGGTTTTACTTTTCAATCAATATTGGTGCTCTTATATCAAGTAGTTTCCTGGTTTGGATACAAGACAATGCCGGGTGGGGTCTAGGGTTTGGCATCCCTGCATTATTTATGGGCCTTGCTATTATAAGTTTCTTTTCTGGCACAAAACTCTACAGATTTCAGAAACCGGGAGGAAGCCCAATTACAAGAATGTGCCAGGTTTTGGTTGCATCCTTCCATAAACGAGATCTAAGGATTCCTGGTGACAGTAATCTTCTGTATGAGGTGCAAGACAAAAGTTCTGCCATTGAAGGAAGTCGCAAGCTGGAACACAGTGATGAACTGAGATGCCTAGATAAAGCGGCTGTCATCTCTGATGCTGAGTTGAAAAACGGGGACTTCTCCAACCCCTGGAGGCTTTGCACAGTAACTCAGGTCGAGGAATTCAAGATTCTAATCCGAATGTTCCCAATATGGGCTACTGGAATCGTCTTTGCTGCCGTATATGCTCAAATGTCAACATTATTCGTTGAACAAGGAACAATGCTGGACAAGACCATTGGTTCTTTCCGCATTCCTCCAGCCTCTCTCTCAACCTTCGATGTAGTAAGTGTTATTTTCTGGGTACCTGTATATGATAGAGTCATAGTCCCAATTGCAAGAAAAGTCACAGGAAAGGAGAGGGGATTCACCGAAATACAGCGGATGGGTATTGGCCTGTTCATATCGGTTTTATGCATGTCAGCTGCAGCCGTGGTAGAGATCAAACGACTGGAACTTGCAAGAGAACTTGATTTGGTGCATAAACCAGAGGCTGTACCACTAAGCATACTTTGGCAAATACCACAATATTTCTTGCTGGGCGCAGCAGAAGTATGCACATTCATTGGGCAGCTTGAGTTTTTCTATGATCAATCTCCAGATGCCATGAGGAGTTTGTGTAGTGCATTGTCTCTATTGACCACTGCTTTGGGGAATTACCTCAGTTCCTTCATTCTAACCATTGTCACTTACTTTACAACAAGAAATGGGCAGCCTGGGTGGATACCAGATAACTTAAATGAGGGCCATTTGGATTTCTTCTTCTGGCTGTTGGCTGGACTGAGCTTCTTGAACTTGTTGGTTTATATTATTGTGCCCCTACCCTCCCCCGATTCCAAATATGATGTCGCACCTTCCCTCATCGTCAAATCCCAATCTCTAGTTCGTGTAGTTCTTCTGGCTCTTTCGCTTGCATCGTGTAGATTCATCGCTCTCGCTCCCCTTTGTCTGGATTCGTCGTCACCCAATTTGTACCGTCGACTGCATCATCCCTGCCTAATCGTGCGCCCATCCATTCGCCATTCCACTCAGCGCCACAACAGATCCTCCTCCACTCAGATTCAATACAAAACAAGCCTAGATCCAAGTTTATTTGTTCAGACTTCACGTTTTTTGCTCAGATCTCATGTCGTGGACTTTTCACCTCTACTCATGGGTTCCTCGCATCTCCGTCTTTGTTCAGAACTTGTGCTTTCGTTTTTAGTTTCACATTGGTTCATCAGACCAATTTGGTTCATTTAG | 3729 | 46.15 | MVLSKTFSESDVSIHSTFASRYVRDSAPRFTMPDNSMPKEAAFQIINDELMLDGNPRLNLASFVTTWMEPECDKLIMDSVNKNYVDMDEYPVTTELQNRCVNMIAHLFNAPLGDSDTAVGVGTVGSSEAIMLAGLAFKRKWQNRRKAEGKAYEKPNIVTGANVQVCWEKFARYFEVELKEVKVREGYYVMDPVQAVEMVDENTICVAAILGSTYNGEFEDVKLLNDLLVEKNKETGWDTPIHVDAASGGFIAPFLYPELEWDFRLPLVKSINVSGHKYGLVYAGIGWVIWRTKQDLPQELIFHINYLGADQPTFTLNFSKGSSQIIAQYYQLIRLGFEGYRNVMQNCHDNAMVLKEGLENTGRFTIVSKDMGVPVVAFSLKDRSRHDEFEVSEMLRRFGWIVPAYPMPEGAKHVSVLRVVIREDFSRTLAERLVLDIVKVLAELDTLPPKNGGNETGGKKRVEETEREIATYWRNITKARKIKLAANQDGPSVTVIANPCGDIYRNHFVSPNYLSYYCNLSDRRNSEMGSQEDDRAILEEGLLQNESNGLYTGDGSVDFHGNPVLKQNTGNWKACPFILGNEGCERLAYYGISTNLVTYLTNKLHQGNVSAARNVTTWQGTCYLTPLIGAILADAYWGRYWTIAAFSTIYFIGMCTLTLSASVPALKPAECVGFMCPPASSAQYIVFFLGLYLIALGTGGIKPCVSSFGADQFDDTDPAERVKKGSFFNWFYFSINIGALISSSFLVWIQDNAGWGLGFGIPALFMGLAIISFFSGTKLYRFQKPGGSPITRMCQVLVASFHKRDLRIPGDSNLLYEVQDKSSAIEGSRKLEHSDELRCLDKAAVISDAELKNGDFSNPWRLCTVTQVEEFKILIRMFPIWATGIVFAAVYAQMSTLFVEQGTMLDKTIGSFRIPPASLSTFDVVSVIFWVPVYDRVIVPIARKVTGKERGFTEIQRMGIGLFISVLCMSAAAVVEIKRLELARELDLVHKPEAVPLSILWQIPQYFLLGAAEVCTFIGQLEFFYDQSPDAMRSLCSALSLLTTALGNYLSSFILTIVTYFTTRNGQPGWIPDNLNEGHLDFFFWLLAGLSFLNLLVYIIVPLPSPDSKYDVAPSLIVKSQSLVRVVLLALSLASCRFIALAPLCLDSSSPNLYRRLHHPCLIVRPSIRHSTQRHNRSSSTQIQYKTSLDPSLFVQTSRFLLRSHVVDFSPLLMGSSHLRLCSELVLSFLVSHWFIRPIWFI | 1242 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 7823502 | 7836449 | + | CePI673135_01g007010.1 | Cec01g0701 | 193918 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec01g0701 | 1242 | CDD | MFS_NPF8 | 572 | 1101 | - | - | |
Cec01g0701 | 1242 | Gene3D | - | 361 | 448 | - | - | |
Cec01g0701 | 1242 | CDD | DOPA_deC_like | 59 | 439 | - | - | |
Cec01g0701 | 1242 | FunFam | Glutamate decarboxylase | 66 | 360 | - | - | |
Cec01g0701 | 1242 | ProSitePatterns | PTR2 family proton/oligopeptide symporters signature 2. | 728 | 740 | IPR018456 | GO:0006857(InterPro)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
Cec01g0701 | 1242 | NCBIfam | glutamate decarboxylase | 16 | 444 | IPR010107 | GO:0004351(InterPro)|GO:0006536(InterPro)|GO:0030170(InterPro) | |
Cec01g0701 | 1242 | ProSitePatterns | PTR2 family proton/oligopeptide symporters signature 1. | 629 | 653 | IPR018456 | GO:0006857(InterPro)|GO:0016020(InterPro)|GO:0022857(InterPro) | |
Cec01g0701 | 1242 | PANTHER | GLUTAMATE DECARBOXYLASE | 1 | 481 | IPR010107 | GO:0004351(PANTHER)|GO:0004351(InterPro)|GO:0005829(PANTHER)|GO:0006536(InterPro)|GO:0006538(PANTHER)|GO:0030170(InterPro) | |
Cec01g0701 | 1242 | Gene3D | MFS general substrate transporter like domains | 544 | 1103 | IPR036259 | - | |
Cec01g0701 | 1242 | FunFam | Glutamate decarboxylase | 1 | 65 | - | - | |
Cec01g0701 | 1242 | Pfam | POT family | 640 | 1071 | IPR000109 | GO:0016020(InterPro)|GO:0022857(InterPro)|GO:0055085(InterPro) | |
Cec01g0701 | 1242 | SUPERFAMILY | MFS general substrate transporter | 567 | 1102 | IPR036259 | - | |
Cec01g0701 | 1242 | Gene3D | - | 1 | 65 | - | - | |
Cec01g0701 | 1242 | Gene3D | - | 66 | 360 | IPR015421 | - | |
Cec01g0701 | 1242 | Pfam | Pyridoxal-dependent decarboxylase conserved domain | 33 | 381 | IPR002129 | GO:0016830(InterPro)|GO:0019752(InterPro)|GO:0030170(InterPro) | |
Cec01g0701 | 1242 | SUPERFAMILY | PLP-dependent transferases | 16 | 444 | IPR015424 | - | |
Cec01g0701 | 1242 | FunFam | Glutamate decarboxylase | 361 | 448 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0701 | Cec-Chr1:7823502 | Cec01g0872 | Cec-Chr1:10033264 | 2.10E-242 | dispersed | |
Cec01g0699 | Cec-Chr1:7804997 | Cec01g0701 | Cec-Chr1:7823502 | 8.40E-286 | proximal |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec01g0701 | K14638 | - | csv:101212257 | 1113.98 |