Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0703 ATGACAGGCGCACACGACATCCATTCTTCATCGAGAACAGTTCATTCTTCTCCCATGCCAAATAAGTTTATCGAGCTTAGACTGACCACCAATAGGGATGGTTTGAATCAACCTAGCTTCCTCGGCTTCATCCCATTTTCTGAGTCGCAATTGGCTCATAAGCCAACCGGTGAAATGGTAATGGTGCCACTCCTAGTGGAACCTCCCGTAACCAATGGCTTTCATCCATTGCTCCGTTCCTCATTGTGCCCTTGCCCTTGTTCTTCAATCCGTAGCCTCTTCTTCCACCGCAGGAAGATGTTTCTCAGGTTGGCTGAACATCGGAATTCCTACCCATTTCTGCATACTACAGCGAACATTTCTTCACCAAATGCTACTGGAAGGAGCAATAACGAGAAGGATTTCTGGGATGATTATGAGTTCGTGGAGGTGATTGGCATTGGCAGTAGAAAGGAAGCCGTACTTGATTTTTGTCTTGAGTCGGCCCTCAGGATTTCATCGCTGCGATTTTGGCAAATTATAAAGCATGATTCTCTAAAAGTGCAACTACTTCAGAGATTCATTGAAAAAGATTACACCCCAAGGATGATTGACATTCCGCTGTCACTACAATCATGTTCGAAGGCTGTTATACTTGTGGTTAGTGCTGGATATGGCTTCGATTACTCTGCAGCTGTTGATATCCTTAGAACCATAAGATCTGCAAATGGATTTACTGTTACAATTGTCTTAAAGCCTTTTAGCTTTGAAGGGAAAAGGCGCCAGGATGAGGTTAAACATTTGGTAGGAAGGCTAAAGGAACATACGAGCTTCTTAATTGATATTGACACTGATAGACTACTTGAAAAGGACTTGGTGACTCTAGATGAGGCTGTGAGATCTGCAAATAATGCTGTCTTGTTGGCTATAAATTCAATGTCCATTGTCAAGTCTGAGATGTTAATAAAGTTCATAGATGAACCTCAAAATGATGTGAAAGAGCTTGGTGTTATAGACGTCATGGAAATTTTGGAGAACCTTAAAGAAGGAAAGATCGGATTTGGAGCTGGTCACAACTTCCGAACTTCAATCTTAAAGTCAATTTATGACTGCCCTTTCCTCAGTGTGCATTTAAAGGATTTGAAAGGTGTGGTTGTATGCATTGTGGCAAGCTCAAGTATTATTGATGACAATGATAAAAGTACCCTGTTGAAAACTTTTCGTGAAGTTACCGCATATACAGGAAAAGTTATATTATCTATAATTCAGGATCTAAATCTGGAGCCCAACTTTCTCATGACAACTGTTCTTCTCGTTGGTTCGACAAAGCAGCAATCTTCCAAAAGTAGTAGCATTTTATCTAGATTGGCCCAGCGTTTCCCTTTGGTTTTTAAGCTTTTATGGAAACCTGAAGAACCATTGGAGGAACCTGAAGAAAGGGATATGCTTGAAGATGCAAGTCCTTCCAATGTAAGACAGTCACCAGACTCTGATGTGGACATAACGAAAATTGCTTCAGAGGGCATGGATAAAGATTTTTATCATGGCACAGAACCTGAAAATTGCCCAACAACAGCCAATTGCAGTGATTTCGTCAGTTTAAGTGATTCTGAACAACTTGAGGCTGAACTGTTAGAAACTGATGTGAATTCTTTGCCTTTTAGCAATGGAATTATTAGAGGAGCTTCTTTTCGCAGAGACCCCCTCCACAGATGGAATTTGGGTCCAGGACATCAGATCGCACAGCAGTGGGCCAGAGAAAGAGCTGCTGATGCTGAGTTGGCTTCTGCACTTGACAATATAAGCATATTTGACCTCCCAGTTGGAGTGAGACCTTCAGAAGAGCTCCAAGATAAAGCCATTCCAAATCCAGAGATGAAATATGAGAAGAAATCTAAAGCTTCAATTAGTAGTTTTAGATTTTCTTCCCAGAATTCATTGACCGATGCAAGTTTAGAAGTGATTAAGGAATTTTACGATACGTCTTCTGCATTTTTAAAAGGGAAATCTTCTGACATTCCTAAGAAGCAAGGACTTCTGTCTGTTCGTGCAGCATCTATGCTGGAAGCAGAGCGAGATACACCTAAAAAGTGGAATCCTGTGATGGAGCTGCAGTACAGAGGTGGCCTTTACAGGGGACGGTGCCAAGGAGGGCTCCCCGAAGGAAAGGGCCGTCTAGTTCTTCAAGATGGGAGCATATATGATGGTATGTGGCGATATGGTATGAGATCAGGTCAGGGAACAGTTTACTTCAACAATGGAGATATGTTTCAGGGATCATGGAGGGATGATGTCATGCATGGAAAGGGCTGGTTTTATTTTCACACAGGAGATCGGTGGTTTGCAAACTTCTGGAAGGGAAAGGCTTATGGAGAAGGTCGCTTCTACTCAAAGTCAGGTGATGTTATATTTGGTCATTTCCAAGATGGATGGCGTCATGGCGACTTTCTTTGCATTAATGTTGACGGTTCAAGATATATAGAAGTTTGGAATGAAGGTTATCTCATGGGACGTGAGCATTTGGACTCCGGTTCTGATACTGCATAA 2526 42.04 MTGAHDIHSSSRTVHSSPMPNKFIELRLTTNRDGLNQPSFLGFIPFSESQLAHKPTGEMVMVPLLVEPPVTNGFHPLLRSSLCPCPCSSIRSLFFHRRKMFLRLAEHRNSYPFLHTTANISSPNATGRSNNEKDFWDDYEFVEVIGIGSRKEAVLDFCLESALRISSLRFWQIIKHDSLKVQLLQRFIEKDYTPRMIDIPLSLQSCSKAVILVVSAGYGFDYSAAVDILRTIRSANGFTVTIVLKPFSFEGKRRQDEVKHLVGRLKEHTSFLIDIDTDRLLEKDLVTLDEAVRSANNAVLLAINSMSIVKSEMLIKFIDEPQNDVKELGVIDVMEILENLKEGKIGFGAGHNFRTSILKSIYDCPFLSVHLKDLKGVVVCIVASSSIIDDNDKSTLLKTFREVTAYTGKVILSIIQDLNLEPNFLMTTVLLVGSTKQQSSKSSSILSRLAQRFPLVFKLLWKPEEPLEEPEERDMLEDASPSNVRQSPDSDVDITKIASEGMDKDFYHGTEPENCPTTANCSDFVSLSDSEQLEAELLETDVNSLPFSNGIIRGASFRRDPLHRWNLGPGHQIAQQWARERAADAELASALDNISIFDLPVGVRPSEELQDKAIPNPEMKYEKKSKASISSFRFSSQNSLTDASLEVIKEFYDTSSAFLKGKSSDIPKKQGLLSVRAASMLEAERDTPKKWNPVMELQYRGGLYRGRCQGGLPEGKGRLVLQDGSIYDGMWRYGMRSGQGTVYFNNGDMFQGSWRDDVMHGKGWFYFHTGDRWFANFWKGKAYGEGRFYSKSGDVIFGHFQDGWRHGDFLCINVDGSRYIEVWNEGYLMGREHLDSGSDTA 841
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 7846995 7863866 - CePI673135_01g007030.1 Cec01g0703 193920

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0703 841 MobiDBLite consensus disorder prediction 468 492 - -
Cec01g0703 841 PANTHER RADIAL SPOKE HEAD 1 HOMOLOG 298 826 - GO:0005829(PANTHER)|GO:0009707(PANTHER)|GO:0010020(PANTHER)|GO:0035452(PANTHER)
Cec01g0703 841 PRINTS Cell division protein FtsZ signature 237 258 IPR003008 GO:0005525(InterPro)
Cec01g0703 841 PRINTS Cell division protein FtsZ signature 331 352 IPR003008 GO:0005525(InterPro)
Cec01g0703 841 Gene3D - 706 762 - -
Cec01g0703 841 SUPERFAMILY Histone H3 K4-specific methyltransferase SET7/9 N-terminal domain 701 826 - -
Cec01g0703 841 SMART morn 748 769 IPR003409 -
Cec01g0703 841 SMART morn 702 723 IPR003409 -
Cec01g0703 841 SMART morn 725 746 IPR003409 -
Cec01g0703 841 Pfam MORN repeat 727 749 IPR003409 -
Cec01g0703 841 Pfam MORN repeat 709 725 IPR003409 -
Cec01g0703 841 Pfam MORN repeat 750 772 IPR003409 -
Cec01g0703 841 SUPERFAMILY Tubulin nucleotide-binding domain-like 144 307 IPR036525 -
Cec01g0703 841 Gene3D Tubulin/FtsZ, GTPase domain 181 433 IPR036525 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0703 - - - - 0.0
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi1g1110 . . Bda01g01766 . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . . Bpe02g01940 . . . . Cmo15g00905 . Cma15g00870 . Car15g00817 . . Bhi12g01003 . . . . . Lcy10g1569 Cla01g00679 Cam01g0711 Cec01g0703 Cco01g0732 Clacu01g0697 Cmu01g0672 Cre09g1833 Lsi09g00736 Csa05g01314 Chy09g00454 Cme09g01260
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0009880 1 1 1 1 1 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 0 1 2 1 2 1 1 1 1 32