Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec01g0741 | ATGAATGGGAAGGATGAATTTGAAGTTGAGAATAGGACGAGTGATCCTATGAGTATCTCCTCCGGCTGGCAATTTGCTGCTGCTGCTAATCTCACTAATGAGTCTGTTGGATTCGTTTCTACCGGGAATCCTTCTGTTGTTAGCAATGGGGATCTAGGTGTTTCTTCTTGTCCTTCGACTTCAATGTCTAACTTATTTACTTCAACACTTTTGAACCATCATACCGAATCGCAAAACTCGGGATTCTGCACCACTTTTAATGAACAAAACAGCATAGTTGCTTCTAATACGACTGTAGTTGATGGAGAGGGTCTGAATTCTTTGAGATCTAATGGTGATACTAGAACGCTGGGTATGGATTGGAATCAACAAAATCCATGGATGAAAGGAATTTTCTCAGGAAATGTTCCTGGAATATTTCCAGCTAATTTGTCTCAACTTCCAGCTGATTCGGCATTCATCGAACGTGCAGCAAGGTTCTCCTGCTTCAATAGCGGAGTTTTTGGGGCTCCGCCTACTGGTCCATTTGGCATTTCAGACTCTATAGGCATTCATTCTGGGAGTGGATTTGGAAGGCAAGAAGTTATTTCAAGAAATGGAGCCTCCAAAGATGTTTCTTTACCCATGGAGCTTGAGTCTAAAGAAAAGAGTCCATCTAAGAATGAGAAAGATAGCGAAATGTCCCAAGACAGGACTAAACAGGGTTGTGTTGGTGAGTCTGGCAATGATTCTGATGAGGCGGGGTCTAGTGGTGGTCAAGACGAGCGGGGCACGTTGGGAGGTGCCATCACAGAACCATCTACTGAAGGACTGTGCTTCAAGAAAAGGAAAAGGGGTGAGCAGAATGTGGGACTTGGACAAGTTAAAGAAGCTCCGCAACAAATCAATGAAACTGCAAAGAATGGAGCATTCAATCAGCAGAAGGGAGATCAAAACCCAAGTTCTACTACTAATAAGACCGCTGGGAAGCAAGGAAAACAAGATTCTCAACCATCAGATGCTCCCAAAGAAGAATACATTCACGTTAGAGCTCGAAGAGGACAGGCAACAAACAGCCATAGTCTTGCTGAAAGGGTTAGAAGAGAAAAGATAAGTGAAAGAATGAGGCTCCTTCAGGACCTTGTGCCTGGGTGTAGTAAGGTCACTGGCAAAGCTGTAATGCTCGATGAAATCATTAACTATGTACAGTCACTGCAACGGCAAGTTGAGTTTTTGTCAATGAAACTTGCAACGGTTAATCCCAGGCTGGATTTTAACATCGAAGAGCTCCTCGCAAAAGAAATCATTCAATCAAAGGCTGGTCCATCTTTGTTCGGTTTTCCTCCTGATCTGCCTGTGCCTTACCTCCCGCAGCATCCGTCTCACCATGGACTTATTCCGCCTTGTCTTCCTAACATGGGGAGTTCTCCGGACCTGCTACGAAGAACAATTAATTCTCAGCTGACATCACTTGTTGGTGGATTCAAGGAGCCTGTTCAGCTACCAAACCGATGGGAGAATGAACTCCACAATGTTGTTCCGATGAACTTTGATGTCACCGCACCTTCCAGTGGCCAAGATGTTGATGGTTCTACTCCACAATGCAACACCAGAGCAGAACTCTAA | 1605 | 44.42 | MNGKDEFEVENRTSDPMSISSGWQFAAAANLTNESVGFVSTGNPSVVSNGDLGVSSCPSTSMSNLFTSTLLNHHTESQNSGFCTTFNEQNSIVASNTTVVDGEGLNSLRSNGDTRTLGMDWNQQNPWMKGIFSGNVPGIFPANLSQLPADSAFIERAARFSCFNSGVFGAPPTGPFGISDSIGIHSGSGFGRQEVISRNGASKDVSLPMELESKEKSPSKNEKDSEMSQDRTKQGCVGESGNDSDEAGSSGGQDERGTLGGAITEPSTEGLCFKKRKRGEQNVGLGQVKEAPQQINETAKNGAFNQQKGDQNPSSTTNKTAGKQGKQDSQPSDAPKEEYIHVRARRGQATNSHSLAERVRREKISERMRLLQDLVPGCSKVTGKAVMLDEIINYVQSLQRQVEFLSMKLATVNPRLDFNIEELLAKEIIQSKAGPSLFGFPPDLPVPYLPQHPSHHGLIPPCLPNMGSSPDLLRRTINSQLTSLVGGFKEPVQLPNRWENELHNVVPMNFDVTAPSSGQDVDGSTPQCNTRAEL | 534 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 8134303 | 8136876 | - | CePI673135_01g007410.1 | Cec01g0741 | 193958 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec01g0741 | 534 | MobiDBLite | consensus disorder prediction | 302 | 329 | - | - | |
Cec01g0741 | 534 | ProSiteProfiles | Myc-type, basic helix-loop-helix (bHLH) domain profile. | 348 | 398 | IPR011598 | GO:0046983(InterPro) | |
Cec01g0741 | 534 | SMART | finulus | 354 | 404 | IPR011598 | GO:0046983(InterPro) | |
Cec01g0741 | 534 | SUPERFAMILY | HLH, helix-loop-helix DNA-binding domain | 346 | 417 | IPR036638 | GO:0046983(InterPro) | |
Cec01g0741 | 534 | CDD | bHLH_AtBPE_like | 338 | 423 | - | - | |
Cec01g0741 | 534 | MobiDBLite | consensus disorder prediction | 200 | 275 | - | - | |
Cec01g0741 | 534 | Gene3D | - | 345 | 419 | IPR036638 | GO:0046983(InterPro) | |
Cec01g0741 | 534 | MobiDBLite | consensus disorder prediction | 302 | 335 | - | - | |
Cec01g0741 | 534 | PANTHER | STEROL REGULATORY ELEMENT-BINDING PROTEIN | 145 | 449 | IPR024097 | GO:0003700(PANTHER)|GO:0005634(PANTHER)|GO:0006355(InterPro) | |
Cec01g0741 | 534 | MobiDBLite | consensus disorder prediction | 231 | 248 | - | - | |
Cec01g0741 | 534 | MobiDBLite | consensus disorder prediction | 208 | 230 | - | - | |
Cec01g0741 | 534 | FunFam | Basic helix-loop-helix transcription factor | 345 | 417 | - | - | |
Cec01g0741 | 534 | MobiDBLite | consensus disorder prediction | 513 | 534 | - | - | |
Cec01g0741 | 534 | Pfam | Helix-loop-helix DNA-binding domain | 351 | 399 | IPR011598 | GO:0046983(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0741 | Cec-Chr1:8134303 | Cec05g2567 | Cec-Chr5:36652382 | 1.20E-104 | dispersed | |
Cec01g0741 | Cec-Chr1:8134303 | Cec02g0524 | Cec-Chr2:4933702 | 7.50E-43 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28877 | PF00010 | HLH | 6.60E-06 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec01g0741 | - | - | - | 0.0 |