Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0751 ATGGAAATTAGGGGGTTACTGTTTTGCCTGGCTTTGCTTTGGTTATGGGCTTTTCCAAGTGAGGCTTCAACAAACAAAGATTTTAACCCTGAGGTTCAAGCTTTGATGGGGATCAAAGCTGCTTTGAAGGATCCTCATTCTGTTCTGACTTGGGATGACGATGCTGTGGATGCATGCACTTGGAATTTCATCACTTGCTCTCCCGATAAACTAGTCATTGGCATAGGAGCTCCAAGCCAAAACTTTTCTGGTACACTCTCACCAAGTATTGCAAATTTGACAAACCTCCAATTTCTGCTTCTTCAGAATAACAATATATCAGGAAAAATCCCCAATGAGATTAGCAAGATACCTAAACTTCGCACACTTGATCTTTCAAACAACTTGTTCTCTGGAGAAATTCCCAGCTCTTTCTCCAATATGAAAAGCCTTCAATACCTGAGACTCAACAATAACACCTTTTCAGGGCCAATCCCAGCATCACTGGCTAACATGAGCCAGCTTGCCCTGCTGGACTTGTCCTATAATAATTTGAGCAGTCCTGTGCCCAGACTGCTGGCTAAGACATTTAACTTTACCGGAAACTCTTTGATATGTTCCCCTGGAATTAAGGAAGTATGCTATGGAACAACTCCATTGCCACTTTCTTTTGTTGTTACTAATTCCACATATTCTCAACCTCCTAGGAGACACAAAGGCCAGAGAATTGCCTTAGTCATTGGTCTCAGCTTGCTCTGCATCTGTCTGTTCACTCTTGCATATGGTTTTTTTTTCTGGCGGAAGCATAGGCACAACCAGCAAATATTCTTTGAAGCTAATGATTGGCATCGGGAAGAACATAGCCTAGGGAACATAAAGAGGTTCCAGTTCAGAGAACTTCAGAATGCTACCCACAATTTCAGCAGTAAAAACTTGGTTGGAAAAGGTGGTTTTGGAAATGTATACAGAGGATATCTACAAGATGGCACCATTGTAGCTGTAAAGAGACTCAAAGATGGGAATGCTGTGAGAGGAGAGATCCAATTTCAGACTGAAGTGGAAATGATAAGCTTGGCAGTGCATAGGAACCTACTCAGATTATATGGTTTCTGTATGACAGAAACCGAGAGGCTTTTGGTCTATCCATACATGTCGAATGGCAGTGTCGCTACCCGTCTTAAAGCAAAACCAGCTCTGGATTGGGGTACAAGGAAGAGAATTGCCTTGGGAGCTGCTAGGGGTTTGTTATACCTACACGAACAGTGTGATCCAAAAATAATTCACAGGGATGTGAAAGCTGCAAATATACTGCTTGATGATTTCTGTGAGGCAGTGGTGGGTGATTTTGGGCTGGCAAAGCTGTTAGATCACAGAGACTCACATGTCACTACTGCAGTGAGGGGAACTGTTGGGCACATTGCACCAGAGTATCTATCAACAGGCCAATCCTCTGAGAAAACAGATGTTTTCGGGTTTGGAATTCTACTACTTGAGCTCATATCAGGTCAAAGAGCTCTTGAATTTGGAAAAGCAGCAAACCAAAAGGGTGCAATACTGGACTGGGTTAAGAAGATACACCAAGAAAAGAAGCTTGAAATGCTTGTTGACAAAGACTTGAAAAGTAATTATGACCCGATTGAACTTGAAGAAATTGTTCGAGTTGCTCTCTTGTGCATTCAATATCTTCCAAGCCACAGGCCTAAGATGTCTGAAGTGGTCAGGATGCTAGAAGGAGATGGGCTTGCAGAGAAATGGGAAGCTTCCCAAAGGGCAGAAGCAAGCAGGAGCAGAGCCAATGAGTTCTCCTCTTCAGAACGTTACTCTGATCTTACTGATGACTCTTCATTGTTTGCTCAAGCGATAGAGCTCTCGGGACCGAGATAA 1863 43.0 MEIRGLLFCLALLWLWAFPSEASTNKDFNPEVQALMGIKAALKDPHSVLTWDDDAVDACTWNFITCSPDKLVIGIGAPSQNFSGTLSPSIANLTNLQFLLLQNNNISGKIPNEISKIPKLRTLDLSNNLFSGEIPSSFSNMKSLQYLRLNNNTFSGPIPASLANMSQLALLDLSYNNLSSPVPRLLAKTFNFTGNSLICSPGIKEVCYGTTPLPLSFVVTNSTYSQPPRRHKGQRIALVIGLSLLCICLFTLAYGFFFWRKHRHNQQIFFEANDWHREEHSLGNIKRFQFRELQNATHNFSSKNLVGKGGFGNVYRGYLQDGTIVAVKRLKDGNAVRGEIQFQTEVEMISLAVHRNLLRLYGFCMTETERLLVYPYMSNGSVATRLKAKPALDWGTRKRIALGAARGLLYLHEQCDPKIIHRDVKAANILLDDFCEAVVGDFGLAKLLDHRDSHVTTAVRGTVGHIAPEYLSTGQSSEKTDVFGFGILLLELISGQRALEFGKAANQKGAILDWVKKIHQEKKLEMLVDKDLKSNYDPIELEEIVRVALLCIQYLPSHRPKMSEVVRMLEGDGLAEKWEASQRAEASRSRANEFSSSERYSDLTDDSSLFAQAIELSGPR 620
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8201332 8204335 - CePI673135_01g007510.1 Cec01g0751 193968
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0751 620 SUPERFAMILY L domain-like 31 200 - -
Cec01g0751 620 Pfam Leucine rich repeat 135 178 IPR001611 GO:0005515(InterPro)
Cec01g0751 620 SMART serkin_6 300 569 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0751 620 FunFam Putative LRR receptor-like serine/threonine-protein kinase 28 209 - -
Cec01g0751 620 FunFam Somatic embryogenesis receptor kinase 1 269 376 - -
Cec01g0751 620 MobiDBLite consensus disorder prediction 580 602 - -
Cec01g0751 620 Pfam Leucine Rich repeats (2 copies) 94 129 IPR025875 -
Cec01g0751 620 ProSitePatterns Serine/Threonine protein kinases active-site signature. 419 431 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g0751 620 Pfam Protein tyrosine and serine/threonine kinase 303 569 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g0751 620 Gene3D Ribonuclease Inhibitor 28 209 IPR032675 -
Cec01g0751 620 ProSiteProfiles Protein kinase domain profile. 300 579 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g0751 620 SUPERFAMILY Protein kinase-like (PK-like) 279 570 IPR011009 -
Cec01g0751 620 Gene3D Transferase(Phosphotransferase) domain 1 377 589 - -
Cec01g0751 620 FunFam Somatic embryogenesis receptor-like kinase 1 377 589 - -
Cec01g0751 620 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 6 620 - -
Cec01g0751 620 ProSitePatterns Protein kinases ATP-binding region signature. 306 328 IPR017441 GO:0005524(InterPro)
Cec01g0751 620 Gene3D Phosphorylase Kinase; domain 1 269 376 - -
Cec01g0751 620 MobiDBLite consensus disorder prediction 587 602 - -
Cec01g0751 620 Pfam Leucine rich repeat N-terminal domain 29 67 IPR013210 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0751 Cec-Chr1:8201332 Cec05g2553 Cec-Chr5:36547815 2.20E-232 dispersed
Cec01g0751 Cec-Chr1:8201332 Cec11g0528 Cec-Chr11:5619330 2.40E-218 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71683 PF00069 Pkinase 3.50E-44 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0751 - - - 0.0