Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0768 ATGAAGCTGATTGATTGTCTGCTGACACCGCCAAAGCCTGAGAAGAAGCAAAAGAGATGGAAATGGGTGTTTGGAAGGATGAGGAACAAGAGACTAGCCACACTGACAGCACCATCGCCGGCAAAAGTGACAACCAGCCAAGAGGAGGAAGAGGAGAGGAAGCAGGCTCTTTCTGTGGCCATTGCGAGCACTGCAGCGGCGGAGGCAGCAGTTGCAGCAGCTAAGGCTGCTGTTGAGGTTGTTTGGCTCACAGGGACCCCTCAATCTCATCAACAAGAGGCTGCAGATGAAGTCGTTAAGCCTCTCAAGAAGGCCCCTCCATCTGATCTCCTTAAACGTGAAAGGGAAATCCATGATATTGCTGCTATTACTATCCAAACCGCTTTCCGTGGCTTCCTTGCGAGAAAAGCATTGAGAGCATTGAAAGGAATAGTGAGGCTACAGGCAATTATTAGAGGGAGAGCTGTTAGGCGCCAAGCCATTGCCACTTTGAAGTGCTTGCAGTCCATCGTTAGCATACAATCACAAGTCTGTTCAAATAGACTTCATCTTCCTCAAAACACTTTCAATTCTCCTGACACGAAGCAGTTTCAGAGCTTGAAAGATAAGATCATAAAGTTGAATTCGAACGATCAAAGGTGGGATGATAGCCTATTATCAAAAGAAGAAGCAGATTCAGCGTTTTTGAGCAGGAAAGAAGCAGTGATTAGGAGAGAGCGAGTCAAGGAATACTTATTTGCCCACAGGAGGTCTGCAGAATCAGAACGAAAGAAGGTAAGAGGAAGATGGAGATACTGGCTAGACCAATGGGTCGACACCCAACTTTCCAAAAGCAAAGAACTCGAAGATTTGGACTCCATGTTCACCTCAAATCCAAAACACAATGAGATAACAAACGACAGATTCAAAACAAACCCAACAACAAAAAACATGGACAGAACAATAGAAGAACACCCCAACCAATCTCCATCTCAAAAACCAGTTCTGAAAAAGCTCTCTCACCACAAGAAGCAACGTTCATTGGAAGGTGGAATAGACTCAAACAGCTCATTTTCAAGCTCCCCACTGGTGCCAACATACATGGCTGCCACTGAATCAGCAAAGGCAAAAGCAAGGTCCTTGAGCTCCCCCAAGCTAAGGCCAGCAGGGGGATTGGACACATGCTCTGATGGGAATTCTCCATGCAAGGCAAAGCAGCTCAGTTTGGTGTCTTCAATGGTGAGTGAAGTTGGAATTAGCAGTGGGAGAAGAGGTTTTCATCAGCAGCAAAGATCACCAGGGCTGAAGGGACTTCCAGGGCCAACAAGATCAAGCAGAACTCTCACCAAGGATTTGAGCATTGATTCTGAGCATTCCTTGCCAAACTGGGAAAGACAAAGTGCCTTCCAATGA 1392 46.34 MKLIDCLLTPPKPEKKQKRWKWVFGRMRNKRLATLTAPSPAKVTTSQEEEEERKQALSVAIASTAAAEAAVAAAKAAVEVVWLTGTPQSHQQEAADEVVKPLKKAPPSDLLKREREIHDIAAITIQTAFRGFLARKALRALKGIVRLQAIIRGRAVRRQAIATLKCLQSIVSIQSQVCSNRLHLPQNTFNSPDTKQFQSLKDKIIKLNSNDQRWDDSLLSKEEADSAFLSRKEAVIRRERVKEYLFAHRRSAESERKKVRGRWRYWLDQWVDTQLSKSKELEDLDSMFTSNPKHNEITNDRFKTNPTTKNMDRTIEEHPNQSPSQKPVLKKLSHHKKQRSLEGGIDSNSSFSSSPLVPTYMAATESAKAKARSLSSPKLRPAGGLDTCSDGNSPCKAKQLSLVSSMVSEVGISSGRRGFHQQQRSPGLKGLPGPTRSSRTLTKDLSIDSEHSLPNWERQSAFQ 463
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8444350 8447265 + CePI673135_01g007680.1 Cec01g0768 193985
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0768 463 SMART iq_5 117 139 IPR000048 GO:0005515(InterPro)
Cec01g0768 463 Pfam IQ calmodulin-binding motif 121 139 IPR000048 GO:0005515(InterPro)
Cec01g0768 463 PANTHER IQ-DOMAIN 5-RELATED 18 397 - -
Cec01g0768 463 ProSiteProfiles IQ motif profile. 118 146 - -
Cec01g0768 463 ProSiteProfiles IQ motif profile. 142 169 - -
Cec01g0768 463 MobiDBLite consensus disorder prediction 411 463 - -
Cec01g0768 463 MobiDBLite consensus disorder prediction 292 353 - -
Cec01g0768 463 MobiDBLite consensus disorder prediction 368 393 - -
Cec01g0768 463 Pfam Protein of unknown function (DUF4005) 344 423 IPR025064 -
Cec01g0768 463 MobiDBLite consensus disorder prediction 296 316 - -
Cec01g0768 463 Gene3D - 119 168 - -
Cec01g0768 463 MobiDBLite consensus disorder prediction 435 463 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0768 Cec-Chr1:8444350 Cec09g2145 Cec-Chr9:38401423 3.80E-27 dispersed
Cec01g0768 Cec-Chr1:8444350 Cec04g1024 Cec-Chr4:29828467 3.10E-21 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0768 - - - 0.0