Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0780 ATGTTTGCGAAGAAGGAAGAAAGGGCCAAAGAAGAGAGAACTGAAGAACATCTCAACTTCGGCTTCAAGTTCCAGAACGAAGCCCAGATTCCATTGTTGCAACTCGCCCCAGAGTCTCCTTCTAATCTCTTCATCTCTGTAGCCCGCGACAACCCTCTTTTTCCCCTTTTCATTCTTCCATATTCGCTGATTATGCCAGACGTGCAAGCCCTTGTGAATGATTTCGTTATCAAGCTTAAGAGGCGTAAAATTGAAGGCTCCTTGGCTACAGCGAAGCATACGGCTGAATTGCTTCGTTCTGTTATTTCGCAGCAGCGAATACCCTACACGAATCAGGCGGCTGCTTTGATTGATGCTGTGAAAGCTGTTGGCGAGCAGCTGATTGCTGCGAATCCTGTTGAGCTTGCTGTGGGTAATATTGTGAGGCGGGTTTTGCACATTATCAGAGAGGAGGATCTCTCTCTCACTACAGCTTCTATTGCTGGGTTGAGCTTATCAGCAGTTAGTGATGATGAAGATGACACTGAAAAAGATGATTGCCCGGTCCTCTCAGCTGCTGCTGTTGCAGCTGCTGCAAGAAGCACTTTGCGGCCACCTTCCTTGCAAACTCTTCTTGAGGATGTTCCTAATCAAACATCGATTCATCAAACTTCATCATCTGGAGGCGATTCAGAAGGAAAAAGCAAATCTGCTGATAAAAGTTCGAGGAGTCGAAAACTCAAGCATGATGTAATTGAAGCTGTTAATGAGCTTATTCAGGATATTGCAACTTGTCATGAACAGATTGCTGAACAAGCAGTGGAGCACATTCATCAGAACGAGGTAATATTAACTTTGGGGAGTTCCAGAACAGTATTGGAATTTCTTTGTGCTGCTAAGGAGAAGAAAAGGTCCTTCCGGGTGTTTGTTACTGAGGGTGCTCCAAGATATCAGGGTCATCTTCTTGCTAAGGAGTTGGTTACAAGAGGTTTACAGACCACACTTATTACTGATTCTGCAGTTTTTGCTATGATTTCCCGAGTGAATATGGTAATAGTTGGAGCTCATGCTGTCATGGCAAATGGTGGTGTCATGGCACCAGTCGGATTGCATATGGTGGCCCTTGCAGCTAAAAGGCATGCTGTTCCTTTTGTCGTGCTAGCTGGAAGTCACAAGTTATGCCCTTTGTATCCTCACAATCCGGAAGTTCTACTCAATGAACTGAGGTCCCCATCAGAGCTACTGGACTTTGGTGAATTTTCAGATTGCATGGACTTTGGAACGAACAATGGTTCTCCTCTTCTCCATGTAGTCAACCCTACATTTGACTATGTGCCACCATCACTTGTTAGTTTATTTATTACTGACACAGGTGGCCATAACTCATCATACATGTATCGGCTTATTGCTGATTATTATTCAGCTGATGATTTGGTAATTAAAAGAAGGCCTTCTACAGGCAGCTGA 1446 44.33 MFAKKEERAKEERTEEHLNFGFKFQNEAQIPLLQLAPESPSNLFISVARDNPLFPLFILPYSLIMPDVQALVNDFVIKLKRRKIEGSLATAKHTAELLRSVISQQRIPYTNQAAALIDAVKAVGEQLIAANPVELAVGNIVRRVLHIIREEDLSLTTASIAGLSLSAVSDDEDDTEKDDCPVLSAAAVAAAARSTLRPPSLQTLLEDVPNQTSIHQTSSSGGDSEGKSKSADKSSRSRKLKHDVIEAVNELIQDIATCHEQIAEQAVEHIHQNEVILTLGSSRTVLEFLCAAKEKKRSFRVFVTEGAPRYQGHLLAKELVTRGLQTTLITDSAVFAMISRVNMVIVGAHAVMANGGVMAPVGLHMVALAAKRHAVPFVVLAGSHKLCPLYPHNPEVLLNELRSPSELLDFGEFSDCMDFGTNNGSPLLHVVNPTFDYVPPSLVSLFITDTGGHNSSYMYRLIADYYSADDLVIKRRPSTGS 481
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8588074 8594853 + CePI673135_01g007800.1 Cec01g0780 193997
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0780 481 PANTHER TRANSLATION INITIATION FACTOR EIF-2B SUBUNIT BETA 67 472 IPR051855 GO:0003743(PANTHER)|GO:0005085(PANTHER)|GO:0005851(PANTHER)|GO:0006413(PANTHER)
Cec01g0780 481 MobiDBLite consensus disorder prediction 207 225 - -
Cec01g0780 481 Gene3D - 258 465 IPR042529 -
Cec01g0780 481 MobiDBLite consensus disorder prediction 226 240 - -
Cec01g0780 481 Pfam Initiation factor 2 subunit family 83 453 IPR000649 GO:0044237(InterPro)
Cec01g0780 481 MobiDBLite consensus disorder prediction 207 240 - -
Cec01g0780 481 SUPERFAMILY NagB/RpiA/CoA transferase-like 68 470 IPR037171 -
Cec01g0780 481 FunFam translation initiation factor eIF-2B subunit beta 258 466 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0780 K03754 - csv:101220366 742.651