Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0787 ATGGCGCTCTCTGATAAACCCTCTCGCCAGTCTCTGATCCCCAGCTTCCTCTACTCTTCCCCTTCTTCCACTCGAACCCTCCCTCTCAAGAAGATGCTTCAATCTTCACCCACTCTCGATGGCGTTTCCTCTCCTACTAAGAGCTTTGTTATTCCCGCCCCCACCGAGCCGTCTAAGAAGATCGAGTTGTACTCGCCAGCCTTCTACGCTGCCTGTACTTTTGGTGGAATTCTCAGCTGTGGTCTTACGCATATGGCTGTTACTCCTCTTGATTTGGTTAAATGCAATATGCAGATTGATCCTGCGAAATACAAAAGTATTTCTTCTGGTTTTGGAGTTCTGCTTAAGGAGCAGGGTGCGAGGGGTTTCTTCAGGGGTTGGGTGCCTACTCTCCTTGGATACAGTGCACAGGGTGCTTGCAAGTTTGGCTTTTACGAGTTCTTTAAGAAGTATTACTCTGATATTGCTGGACCTGAGTACGCAGCTAAGTACAAGACCTTGATCTACCTTGCGGGTTCTGCATCTGCTGAGGTTATTGCTGATGTTGCACTTTGCCCTTTTGAAGCTGTGAAGGTTCGGGTTCAAACTCAGCCTGGTTTTGCTAGAGGTCTATCAGATGGACTTCCCAAGTTTGTCAGATCTGAAGGAGCTCTTGGGTTGTACAAGGGTATAGTTCCACTATGGGGACGCCAGATTCCATACACGATGATGAAGTTTGCATCCTTTGAGACAATAGTTGAGATGCTATATAAGTATGCCATTCCCACACCAAAGGACCAGTGCAGCAAATCTCTCCAGCTTGGTGTTAGTTTTGCTGGTGGATATGTGGCTGGTGTTTTCTGTGCTATTGTATCTCATCCTGCTGATAATCTCGTGTCGTTCCTCAACAACGCCAAAGGAGCAACTGTTGGTGATGCTGTCAAGAAGCTCGGGTTATGGGGTCTCTTCACCCGTGGGCTACCCCTCCGTATTGTGATGATTGGAACTCTTACTGGTGCTCAGTGGGGTATCTATGATGCGTTCAAAGTATTTGTTGGACTGCCTACTACTGGTGGCCCTGCACCTGCTGCCCCTGCACCTGCTGTTGCGGAGCTCGCAAAGGCGTGA 1107 48.6 MALSDKPSRQSLIPSFLYSSPSSTRTLPLKKMLQSSPTLDGVSSPTKSFVIPAPTEPSKKIELYSPAFYAACTFGGILSCGLTHMAVTPLDLVKCNMQIDPAKYKSISSGFGVLLKEQGARGFFRGWVPTLLGYSAQGACKFGFYEFFKKYYSDIAGPEYAAKYKTLIYLAGSASAEVIADVALCPFEAVKVRVQTQPGFARGLSDGLPKFVRSEGALGLYKGIVPLWGRQIPYTMMKFASFETIVEMLYKYAIPTPKDQCSKSLQLGVSFAGGYVAGVFCAIVSHPADNLVSFLNNAKGATVGDAVKKLGLWGLFTRGLPLRIVMIGTLTGAQWGIYDAFKVFVGLPTTGGPAPAAPAPAVAELAKA 368
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 8657783 8660888 - CePI673135_01g007870.1 Cec01g0787 194004
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0787 368 FunFam Phosphate carrier protein, mitochondrial 67 345 - -
Cec01g0787 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 164 248 IPR018108 -
Cec01g0787 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 67 151 IPR018108 -
Cec01g0787 368 Gene3D Mitochondrial carrier domain 69 345 IPR023395 -
Cec01g0787 368 SUPERFAMILY Mitochondrial carrier 70 340 IPR023395 -
Cec01g0787 368 Pfam Mitochondrial carrier protein 69 154 IPR018108 -
Cec01g0787 368 Pfam Mitochondrial carrier protein 165 252 IPR018108 -
Cec01g0787 368 ProSiteProfiles Solute carrier (Solcar) repeat profile. 265 344 IPR018108 -
Cec01g0787 368 PANTHER SOLUTE CARRIER FAMILY 25 (MITOCHONDRIAL CARRIER PHOSPHATE CARRIER), MEMBER 3, LIKE-RELATED-RELATED 53 353 IPR044677 GO:0005315(InterPro)|GO:0005315(PANTHER)|GO:0031305(PANTHER)|GO:0035435(PANTHER)|GO:1990547(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0787 Cec-Chr1:8657783 Cec05g1439 Cec-Chr5:16964836 1.80E-165 dispersed
Cec01g0787 Cec-Chr1:8657783 Cec10g0174 Cec-Chr10:1696166 4.00E-11 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0787 K15102 - csv:101221771 666.381