Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec01g0832 | ATGATGCCCATTTTGGACCACCACCATGATCATAATAATCAACCCCTCCTCCTCCCCGCCCATGATCTCGCCGCCGCTGTCCCCGCCCCCGCCTTCCATCGCAAGAAACGGATGCCCAGAAACCGCCGCCGCTCTTCTTCTAATCTTCCCTTCTTTCCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCAAATAACACTCCCCATCTCCCTCCTCCCCGGGTAATTGATCCAAGGAACCTGAAGTTTCTTTTCCAGAAGGAGCTTAAGAACAGTGATGTTAGCTCTCTGAGGAGAATGATACTCCCAAAGAAAGCAGCTGAAACTCACCTTCCAGCTTTGGAGTCTAAAGAAGGAATTATAATCACCATGGATGACTTGGATGGGGTGCATGTTTGGAACTTCAAATATAGGTTTTGGCCAAATAACAATAGTAGAATGTATGTACTTGAAAATACTGGAGACTTTGTCAATGCCCATGGCTTACATCTAGGAGATTTCATCATGGTTTACCAAGATTGTGAAGAACATAACTATGTGATTCAAGCAAAAAAGGCTTGCGAGCAAGAACTATATTCCGACATAGCAACCAACGTCGTGATCAACGACGACATTGTGTTTCAAGACTATGATGCTAGCAAAGCGGCCAGCTCCATATACGTGCCTAGTCCAACCATGGAAGATCCTGTGTCATCATTCATCTATGACACTAGTTCTGCCTTCGACAACGATTCGCCTTTCGACTTTATGAGTGGATCAATGACCAACTACTCAAGAATGGGAGGCCTCGAAGGCTTTGGATCGGTCGAGAACTTGTCTCTCGACGACTTCTACTAA | 846 | 45.15 | MMPILDHHHDHNNQPLLLPAHDLAAAVPAPAFHRKKRMPRNRRRSSSNLPFFPSSSSSSSSSSSSSSNNTPHLPPPRVIDPRNLKFLFQKELKNSDVSSLRRMILPKKAAETHLPALESKEGIIITMDDLDGVHVWNFKYRFWPNNNSRMYVLENTGDFVNAHGLHLGDFIMVYQDCEEHNYVIQAKKACEQELYSDIATNVVINDDIVFQDYDASKAASSIYVPSPTMEDPVSSFIYDTSSAFDNDSPFDFMSGSMTNYSRMGGLEGFGSVENLSLDDFY | 281 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 9339025 | 9342441 | - | CePI673135_01g008320.1 | Cec01g0832 | 194049 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec01g0832 | 281 | CDD | B3_DNA | 86 | 188 | IPR003340 | GO:0003677(InterPro) | |
Cec01g0832 | 281 | Gene3D | - | 84 | 201 | IPR015300 | - | |
Cec01g0832 | 281 | MobiDBLite | consensus disorder prediction | 44 | 73 | - | - | |
Cec01g0832 | 281 | PANTHER | B3 DOMAIN-CONTAINING TRANSCRIPTION FACTOR ABI3 | 36 | 189 | IPR044800 | GO:0003700(InterPro) | |
Cec01g0832 | 281 | SUPERFAMILY | DNA-binding pseudobarrel domain | 86 | 189 | IPR015300 | - | |
Cec01g0832 | 281 | FunFam | B3 domain-containing transcription factor FUS3 | 84 | 198 | - | - | |
Cec01g0832 | 281 | ProSiteProfiles | B3 DNA-binding domain profile. | 88 | 190 | IPR003340 | GO:0003677(InterPro) | |
Cec01g0832 | 281 | SMART | B3_2 | 88 | 190 | IPR003340 | GO:0003677(InterPro) | |
Cec01g0832 | 281 | Pfam | B3 DNA binding domain | 88 | 185 | IPR003340 | GO:0003677(InterPro) | |
Cec01g0832 | 281 | MobiDBLite | consensus disorder prediction | 31 | 80 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g0832 | Cec-Chr1:9339025 | Cec09g0909 | Cec-Chr9:8603971 | 2.20E-33 | dispersed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28887 | PF02362 | B3 | 2.10E-17 | CL0405 | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec01g0832 | K09287 | - | csv:101222512 | 409.453 |