Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0836 ATGACCTTCATTGATGTGAATGCCACCTTTGTTTCTGGTTTCTTTGATCAATACATGGGTACTATAACTGGAATAAGTGATCTTGACCCTGTTCGCTGGCCGAATTCTCATTGGCGTTCTGTCAAGGTAGGGTGGGATGAGTCAACAGCTGGGGAGAGGCAGCCAAGGGTATCGTTGTGGGAAATTGAGCCTTTGACTACATTTCCTATGTATCCATCTCTGTTTCCACTTAGACTGAAACGTCCATGGCATCCTGGAGTCTCTTCTGTTCATGATAACAGAGATGATGCATCTAATGGCTTAATGTGGCTTCGGGGAGGAGTTGGGGAACAGGGTCTACACTCACTGAATTTGCAATCTGTGGGCCCCCTGCCCTGGTTGCAGCAGAGACTTGACTCTTCCATGTTTGGAAATGATCATAACCAACAGTATCAAGCCATGTTGGCAGCTGGAATGCCAAACCTTGGAGGTGTTGATATGCTGAGACAGCAAATTATGCATCTTCAACAACCTTTCCAATATATTCAACAGGCAGGCTTCCATAACTCTCTGTTGCAGATGCAACAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAGCAATTGGTTCAACAATCTATGCCTCAGAACATCCTGCAGGCACCAAACCAAGTTTTGGCAGAAAATCTACCTCAACACATTCTCCAGCAAACTCTACAAAATCAACCTGAGGATCTGCCAAACCAGCAACAGCATACTTATCATGATTCCATGCAGGTTCAAAGCAATCAATTTCATCAGGGTGGGCATTCAAATGTGCCATCACCCACATTTCCCAGAACAGACCTTATAGATTCCAACACAAATTACTCAGATTCCATTACCTCTAGAAGGAATATACTTGCTTCATCATGTGCTGAAGGGACAGGAAATCTTTCCAATATCTACAGAAGTGGGCAGTCAATCCTAACTGAGCATTTACCTCAACAATCTCCTGTTTCTAAGAATGCTCATTCACAGGTTGATGCTCACTCAAACTCAATGTCATTTCCACCATTTTCTGGTAGAGACTCAATTCTGGAGCTGGGAAATTGTAATTCAGATTCTCCAAGTCCTACACTTTTTGGTGTAAATATTGATTCATCTGGACTTCTACTTCCCTCTAATGTGCCCACTTACGCTTCTCCATCAATTGGTCCTGATTCATCCTCAATGCCACTGGGAGATTCTGGATTTCAGAATTCTCTGTACAGTTGTGTCCAAGACTCTTCTGAGTTGTTGCACAACTCAGGGCAAGTTGATCCATCGAATCCAACTCGGACATTTGTTAAGGTTTACAAATCTCGATCTGTTGGGCGCTCACTAGACATCTCCCGGTTCAGCAGCTATCAGGAGCTGCGAGAGGAGCTGGCTCAGATGTTTGGAATCGAGGGACAGTTGGAAGACCCTCATAGATCAGGCTGGCAGCTTGTATTTGTCGACAGGGAGAATGATGTACTTCTCCTTGGAGATGACCCTTGGGAGGCATTTGTGAATAATGTCGGGTATATCAAGATACTTTCTCCCCAGGACTTTCAGAAACTAGGGGAACAGGCAATCGAGTCCTTTAACCCTATCGTTGGTCAGCGACTTACCAGTGGTGGTAATGAAGCTGGAAATGTTTCAGGACTACCATCTGTTGGTTCGCTAGAATATTGA 1674 44.86 MTFIDVNATFVSGFFDQYMGTITGISDLDPVRWPNSHWRSVKVGWDESTAGERQPRVSLWEIEPLTTFPMYPSLFPLRLKRPWHPGVSSVHDNRDDASNGLMWLRGGVGEQGLHSLNLQSVGPLPWLQQRLDSSMFGNDHNQQYQAMLAAGMPNLGGVDMLRQQIMHLQQPFQYIQQAGFHNSLLQMQQQQQQQQQQQQQLVQQSMPQNILQAPNQVLAENLPQHILQQTLQNQPEDLPNQQQHTYHDSMQVQSNQFHQGGHSNVPSPTFPRTDLIDSNTNYSDSITSRRNILASSCAEGTGNLSNIYRSGQSILTEHLPQQSPVSKNAHSQVDAHSNSMSFPPFSGRDSILELGNCNSDSPSPTLFGVNIDSSGLLLPSNVPTYASPSIGPDSSSMPLGDSGFQNSLYSCVQDSSELLHNSGQVDPSNPTRTFVKVYKSRSVGRSLDISRFSSYQELREELAQMFGIEGQLEDPHRSGWQLVFVDRENDVLLLGDDPWEAFVNNVGYIKILSPQDFQKLGEQAIESFNPIVGQRLTSGGNEAGNVSGLPSVGSLEY 557
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 9377175 9382948 - CePI673135_01g008360.1 Cec01g0836 194053
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0836 557 ProSiteProfiles PB1 domain profile. 432 516 IPR053793 -
Cec01g0836 557 PANTHER AUXIN RESPONSE FACTOR 4-RELATED 17 523 IPR044835 GO:0003677(InterPro)|GO:0006355(InterPro)|GO:0009725(InterPro)
Cec01g0836 557 FunFam Auxin response factor 427 521 - -
Cec01g0836 557 FunFam Auxin response factor 15 69 - -
Cec01g0836 557 Gene3D - 428 521 - -
Cec01g0836 557 MobiDBLite consensus disorder prediction 256 276 - -
Cec01g0836 557 Pfam AUX/IAA family 428 518 IPR033389 -
Cec01g0836 557 Gene3D - 11 69 - -
Cec01g0836 557 Coils Coil 184 204 - -
Cec01g0836 557 SUPERFAMILY CAD & PB1 domains 425 506 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0836 Cec-Chr1:9377175 Cec03g0767 Cec-Chr3:8512698 6.30E-93 dispersed
Cec01g0836 Cec-Chr1:9377175 Cec04g2197 Cec-Chr4:39695644 3.00E-103 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0836 K14486 - csv:101208098 1025.77