Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0878 ATGGAGAACAACCAACCTGAGAATCAACATCCTCTTCACAAAACCACTAGCTTCAACGATGCCCCCAAATTGGATGCTGTTGCTGATGATGCCAATCTCACCCCTCCTCTCCCTCCTCTTCTACAAACTGATGCTGCTCTAAAATCTTTGGAGGATCAGGATCAGAATAATCAGAATCAGCATCAGGATCAACCTCAGGATCAACCTCAGGATCAGAAGGAGAAGGAGAAGGAGAAGGAGAAGGAGGAGGAGGAGAAGAAGGAAGTGGAGGAGGAAGAGAACAGCAAGGAAGGGGAGGAAAATACTGAGGTTGAACAATCCAACAACGAACCGGATCTTCATTACAATCTCCATACCATTCTCGAAGATGTCGATCAATTTCTCTCAACTCCTCACAGTTCTCGTGATCAAGAGGAAGATTCTGTTGTTCAAATTCCTCAGTTCATCGACAAATTCTTGGATCTTGTCGATGTGAAGATTGACCAATACAATAACGACGAATCGAATGCGAAGGAGAAAGAGTGTAGAGTACCGGAGGATGAGTCCACTTTTCTCGAAGCCGTCGATCGGATATGCAAGCTGAAAACTGCAATTCACGAAATGAAATTGGAAGAGGATAAGAATTCGTTGATCAATCGCATCGGGAGCACTCAACAGCGAGCGATTTCTTATTTGGAAGAAGAGTTCAGATTCTTTCTCGAGGAATCTAGAAACAGCGATTCCGATCCTGCTGCCGATACGAAAGGGAAACAAGAACAGGATCGTTCTGCATTACCGGACAATGAATCCGATCAGTTCCAGTTTCCAGGTTACTCCGACGAGATCGTGAACTATTTGAACAAAATCGCTAAGCAAATGATTTCCGGTGGATACGAATCGGAATGCTGCCAAGCCTACATGGTTGCGAGAAGAAACATATTCGAAGACGCCTTGCTGAAGCTCGGTTTCGAGAAACACAGCATCGATGATATCCAGAAGATGAGTTGGGAATCAATGGAGAGGGAGATCGCGACATGGATCAGAACCATCAAGCAATGCGCCACCATTTTATTCTCCGGCGAACGGAATCTCGTCGAATCTGTATTTTCATCGTATCCTCCAATGTCCGCCAGTCTGTTTAGCAATCTAACTCGCGGCATTATGATTCAACTCCTAAATTTCTCAGAAGGTGTAGCAATGACGAAACGCTCCGCCGAGAAATTGTTCAAGCTTCTTGATATGTACGAAGCTCTTCGTGACATGGTCCCAAAAATGGAAGTATTATTTCCAGAAGAATCCGCTAACGAGCTCAAAACAGAAACCACAACCGCTCGAACTCGTCTAGGCGAAGCGGCGATTTGCATATTTTGCGATCTCGAGAACTCAATCAAAGCAGACACCGGAAAAACTCCGGTACCAGGCGGCGCCGTTCATCCATTAACTCGATACACCATAAACTACTTGAAATACGCTTGCGAGTACAGAAACACACTGGAACAGATTTTCAAAGAGCATTCAAAGATCGAACGAGCCGATTCAACAAGTCGACCACATTTCGAAGGCGAACAAGCACCACAATACAACTCTAGCATTGACAATCAATCCCCATTCGCGGTTGAACTGACGCGAGTAATGGAGCTCCTGGACTCAAATCTGGAAGCAAAATCAAAGCTATACAGAGATATAGCACTGAGTTCGATTTTCATGATGAACAACGGACGATACATCTTGCAGAAGATCAAAGGATCTGCAGATATCCATGAACTACTAGGCGATACGTGGTACAGGAAGAGATCTTCGGATTTGCGTCAGTATCACAAGAATTACCAGAGAGAAACGTGGGGGAAGTTGTTAGGTTGTTTGAACCACGAAGGATTAACAGTGCACGGGAAAGTGGTAAAGCCAGTGCTGAAGGAGAGGTTTAAAGGATTCAACGCGCTGTTCGAAGAGATTCATAAAACACAGAGCTCGTGGATCATAAGCGACGAGCAACTTCAATCGGAGCTGCGAGTATCGATATCGGCGGTGATGATTCCGGCGTACAGATCATTCTTAGGGAGGTTTTCGCAGGTTTTGGATCCGGGGAGACAAACAGAGAAATATATAAAGTTTCAGCCTGAAGATATAGAGACATACATAGATGATCTATTTGATGGAAATCCAAGCTCCATGGCAAGAAGGAGAACATAA 2169 44.72 MENNQPENQHPLHKTTSFNDAPKLDAVADDANLTPPLPPLLQTDAALKSLEDQDQNNQNQHQDQPQDQPQDQKEKEKEKEKEEEEKKEVEEEENSKEGEENTEVEQSNNEPDLHYNLHTILEDVDQFLSTPHSSRDQEEDSVVQIPQFIDKFLDLVDVKIDQYNNDESNAKEKECRVPEDESTFLEAVDRICKLKTAIHEMKLEEDKNSLINRIGSTQQRAISYLEEEFRFFLEESRNSDSDPAADTKGKQEQDRSALPDNESDQFQFPGYSDEIVNYLNKIAKQMISGGYESECCQAYMVARRNIFEDALLKLGFEKHSIDDIQKMSWESMEREIATWIRTIKQCATILFSGERNLVESVFSSYPPMSASLFSNLTRGIMIQLLNFSEGVAMTKRSAEKLFKLLDMYEALRDMVPKMEVLFPEESANELKTETTTARTRLGEAAICIFCDLENSIKADTGKTPVPGGAVHPLTRYTINYLKYACEYRNTLEQIFKEHSKIERADSTSRPHFEGEQAPQYNSSIDNQSPFAVELTRVMELLDSNLEAKSKLYRDIALSSIFMMNNGRYILQKIKGSADIHELLGDTWYRKRSSDLRQYHKNYQRETWGKLLGCLNHEGLTVHGKVVKPVLKERFKGFNALFEEIHKTQSSWIISDEQLQSELRVSISAVMIPAYRSFLGRFSQVLDPGRQTEKYIKFQPEDIETYIDDLFDGNPSSMARRRT 722
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 10145292 10147460 - CePI673135_01g008780.1 Cec01g0878 194095
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0878 722 PANTHER EXOCYST COMPLEX PROTEIN EXO70 91 713 IPR004140 GO:0000145(InterPro)|GO:0000145(PANTHER)|GO:0006887(InterPro)|GO:0006887(PANTHER)
Cec01g0878 722 Pfam Exocyst complex component Exo70 N-terminal 153 234 - -
Cec01g0878 722 MobiDBLite consensus disorder prediction 1 16 - -
Cec01g0878 722 SUPERFAMILY Cullin repeat-like 179 711 IPR016159 -
Cec01g0878 722 Gene3D Exocyst complex component Exo70 159 720 - -
Cec01g0878 722 MobiDBLite consensus disorder prediction 236 259 - -
Cec01g0878 722 Pfam Exo70 exocyst complex subunit C-terminal 338 708 IPR046364 GO:0000145(InterPro)|GO:0005546(InterPro)|GO:0006887(InterPro)
Cec01g0878 722 Coils Coil 70 102 - -
Cec01g0878 722 MobiDBLite consensus disorder prediction 67 84 - -
Cec01g0878 722 MobiDBLite consensus disorder prediction 1 110 - -
Cec01g0878 722 MobiDBLite consensus disorder prediction 48 66 - -
Cec01g0878 722 MobiDBLite consensus disorder prediction 236 268 - -
Cec01g0878 722 MobiDBLite consensus disorder prediction 85 99 - -
Cec01g0878 722 FunFam Exocyst subunit Exo70 family protein 167 718 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0878 Cec-Chr1:10145292 Cec07g1652 Cec-Chr7:32109478 4.70E-173 dispersed
Cec01g0878 Cec-Chr1:10145292 Cec10g2088 Cec-Chr10:35559846 6.70E-71 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0878 K07195 - csv:101206040 1151.35