Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0935 ATGGCCGCAAAAGATGCAGAGCAAGTCTTGGACGTGCAGTCGGTTGTTGAAGCAGTAGTTGCAAACGAAGACGCCGATGTTCCTAGCTACGAAGTAGAAAGCCTCTGCATGCGTTGCGGCGAAAACGGGACTACAAGATTTTTATTAACTTTAATTCCGCACTTCAGAAAGATCTTGTTGTCAGCCTTTGAATGTCTACATTGTGGTGAGAGGAACAATGAAGTCCAGTTTGCTGGTGAGATCCAGCCACGAGGCTGTTGCTACTGTTTGGAGGTTCATGCAGGCGACCAGAAGATGCTCAATCGACAAGTGGTAAAATCTGAATCTGCCATTATTAAGATCCCAGAATTGGATTTTGAGATTCCAGCAGAGGCTCAATGTGGAACTCTATCAACTGATGGTCAGTATACTAATGATTTAATCCATTTTGAGAGATTCACTGGAGACAACCTTCATCACTTCTTTGCTGCCTGCCATCATAAGAATTCTGAGATTTATTGGAACCCAAAGCCTTCACACCAACCAAATCTCCTTTGTGAAAGGTGCCTCAAGATTGTTGCTCTGTTCTGTGCTGATGGGAGACCATTCAATATGGTGTGGGAGGAATCTCTTTCCAAGTCACTCCGTGAAGAGCTTCTTGTAGAAGGAGATAAAGGCAAATTCAATCTCTTCATCTTGGGGCAAACTAATGTGGAAGGTATATTGGTACGAGCCGTAGATGAATTAGAAGCCCTTCAAGAGGAACGTAGGAAGGTGGATCCTCAGACTGCTGAAGCAATAGACCAGTTTATCCTGAAACTGAAAGCTTGTGCCATGGGAGATTCATCATTCTCCTTCATCTTGGATGATCCAGCTGGAAACAGCTTCATTGAGAACCCATTTGCACCAGCTAAAGATCCATCATTAAGTATCAAGTTTTATGAGCGGACTCCAGAACAACAAGCATCGTTGGGTTATTACGTTGAACCATCACAACCAGCAGAAGCTGAGGGTGGAGCATCAACAGGTGGAGTTGATGCTTCTAATCAAGTTAGAGGAGAGGCACATGGATCTGTAGGAGCAACTGCTGGCCATCGGGCAATAGCTCAAAGTAACAGTGCAGAGATTGCTGAGGCCTTGTTTCGTTACACTGCACCAGAAGAAGTGATGACTTTCCCATCAACATGTGGAGCTTGTGCAGTTAGGTGTGAGACTCGAATGTTTGTAACCAAAATTCCCTACTTCCAAGAAGTGATTGTCATGGCAACTACTTGTGATGCTTGTGGTTACCGTAGTTCTGAGCTGAAGCCTGGAGGGCGAATCCCTGAAAAAGGAAAGATAATTAGTCTTTGTGTGAAGGATGTTAGAGATCTCAGTCGAGATGTGATAAAGTCAGATACTGCAAGTGTAAAAGTCCCAGATCTTGACTTGGAGCTGACTAGTGGCACTCTTGGGGGAATTGTTACAACTGTCGAAGGTTTAATCACAAAGATAAGTGAAAGTCTTGAGAGAGTACATGGATTTACTTTTGGAGACAGTCTTGATGAAAATAGAAGAAACAAATGGTTGGACTTCAAAACAAGACTAACCAAGCTCTTGAGTTTGGAACAGCCTTGGACTCTCATCCTTGATGATGCATTAGCAAATTCGTTTATTGCACCAGTGACAGATGATATGAAAGATGACCATCAGTTAACATGCGAGGAATACGAGAGATCCTGGGAACAGAATGAGGAACTTGGTTTGAACGACATGGACACTTCGGCCGCTGATGCTGCATATAATTAA 1767 43.58 MAAKDAEQVLDVQSVVEAVVANEDADVPSYEVESLCMRCGENGTTRFLLTLIPHFRKILLSAFECLHCGERNNEVQFAGEIQPRGCCYCLEVHAGDQKMLNRQVVKSESAIIKIPELDFEIPAEAQCGTLSTDGQYTNDLIHFERFTGDNLHHFFAACHHKNSEIYWNPKPSHQPNLLCERCLKIVALFCADGRPFNMVWEESLSKSLREELLVEGDKGKFNLFILGQTNVEGILVRAVDELEALQEERRKVDPQTAEAIDQFILKLKACAMGDSSFSFILDDPAGNSFIENPFAPAKDPSLSIKFYERTPEQQASLGYYVEPSQPAEAEGGASTGGVDASNQVRGEAHGSVGATAGHRAIAQSNSAEIAEALFRYTAPEEVMTFPSTCGACAVRCETRMFVTKIPYFQEVIVMATTCDACGYRSSELKPGGRIPEKGKIISLCVKDVRDLSRDVIKSDTASVKVPDLDLELTSGTLGGIVTTVEGLITKISESLERVHGFTFGDSLDENRRNKWLDFKTRLTKLLSLEQPWTLILDDALANSFIAPVTDDMKDDHQLTCEEYERSWEQNEELGLNDMDTSAADAAYN 588
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11767989 11791586 + CePI673135_01g009350.1 Cec01g0935 194152
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0935 588 SMART zpr1 387 547 IPR004457 GO:0008270(InterPro)
Cec01g0935 588 SMART zpr1 34 292 IPR004457 GO:0008270(InterPro)
Cec01g0935 588 FunFam Zinc finger protein ZPR1 24 79 - -
Cec01g0935 588 Gene3D ZPR1, A/B domain 224 319 IPR042451 -
Cec01g0935 588 Gene3D ZPR1, A/B domain 433 575 IPR042451 -
Cec01g0935 588 Gene3D ZPR1, A/B domain 80 141 IPR042451 -
Cec01g0935 588 Gene3D ZPR1, zinc finger domain 377 432 IPR042452 -
Cec01g0935 588 Gene3D ZPR1, zinc finger domain 26 79 IPR042452 -
Cec01g0935 588 NCBIfam ZPR1 zinc finger domain 388 579 IPR004457 GO:0008270(InterPro)
Cec01g0935 588 FunFam Zinc finger protein ZPR1 378 432 - -
Cec01g0935 588 Pfam ZPR1 zinc-finger domain 31 83 IPR004457 GO:0008270(InterPro)
Cec01g0935 588 Pfam ZPR1 zinc-finger domain 381 436 IPR004457 GO:0008270(InterPro)
Cec01g0935 588 PANTHER ZINC FINGER PROTEIN ZPR1 229 585 IPR040141 GO:0005634(PANTHER)|GO:0005737(PANTHER)
Cec01g0935 588 FunFam Zinc finger protein ZPR1 433 575 - -
Cec01g0935 588 Pfam ZPR1 jelly-roll domain 229 319 - -
Cec01g0935 588 Pfam ZPR1 jelly-roll domain 450 575 - -
Cec01g0935 588 Pfam ZPR1 jelly-roll domain 99 132 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0935 K06874 - csv:101208000 678.707