Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0939 ATGCCTTACGATCCTCACTTTCGGGCTGATGTTCCCGTAAATGTTAACGACAACAAATTCACAATTTATCCAAGAGCTCTAAACATTACATGGGGTAATGATAAGCGATATTGGAACTTACCTCGTCGAGACCCGAAGAAGGAAGGGGGTTTTGCAGAGCTGAAACAAGTATGCTGGTTGGAAGTAACTGGCTCAACTGAGAAAGAACTTGTGCCTGGAAAAGAGTACAAAGTGGGGTTTGTGGTATCACTAAGGCCAGATGCTTTTGGATGGGATGACTGTAGCGTTTACATAATGGCTAAGATTGGGAAAAAGGGTAGTTTCTCTTTCAAGAAAATCAGTCTTGCAGGCAAACCTACAGATCTCACAAAATTTACCATTCCTAATGATGATGATAAGTTGACCATCGAAGTCGCTGATCCCAAAGAACGCAAACCGTCTGAAAATGATGATCTAAAGCTCTATTTTGGTCTCTATGAGGTTTGGACCAATAGATGGAAGGGAGGGTTGAGAATCCATCATGCATTTGTTGAAGGTGTTCACTCCACCGATAAAAGCACTCAATCAAAGTAA 573 41.71 MPYDPHFRADVPVNVNDNKFTIYPRALNITWGNDKRYWNLPRRDPKKEGGFAELKQVCWLEVTGSTEKELVPGKEYKVGFVVSLRPDAFGWDDCSVYIMAKIGKKGSFSFKKISLAGKPTDLTKFTIPNDDDKLTIEVADPKERKPSENDDLKLYFGLYEVWTNRWKGGLRIHHAFVEGVHSTDKSTQSK 190
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 11876853 11879616 - CePI673135_01g009390.1 Cec01g0939 194156
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0939 190 Pfam Phloem protein 2 18 174 IPR025886 -
Cec01g0939 190 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN 17 174 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0939 Cec-Chr1:11876853 Cec01g0954 Cec-Chr1:12359722 2.80E-48 dispersed
Cec01g0938 Cec-Chr1:11858258 Cec01g0939 Cec-Chr1:11876853 1.20E-40 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0939 - - - 0.0