Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0953 ATGGTTGGTTTCTCATATTCATCACCTCATTCCAATGGAGATCCAAAGGCAATAGAAAAGATTAAGAACCAAAAGACAATAATTTATCCCAATGGTTTCAACATCACATGGGGCAACGACAACCGTTATTGGCGCTTACCTCGTCAATCTCGTAACTTGAAGGAGTCGAGTGCAGCAGCAGAGTTACTACAAGTGTCATGGTTCGAGGTGACATGTTCGACAGACAATGTGGATGTCGGAAAAAGCTACAGAGTTGGGTTCAACCTATCCATGACAGTCGCAGCTTTTGGCTGGAAAGGATGTGAAGTTTACATAATGGCCAAGATTGGGAAGGCAGGGAAATTTGTGTACAAGAAGGTGTGTCTTGACACTCGATGCTCTGATCAGAACAAGTTCAATATGCCGGAAGATGATCTAATTATCACCGTGAACCCTCCGCCGAGCTCACCGGGAGACAACCGTCTCTACTTTGGAATGTACGAGGTTTGGAGTGGGAGGTGGAAGGGAGGACTCAAAATCCACCATGCATTTGTCGAGAAGGTTGGAAACTAG 552 45.29 MVGFSYSSPHSNGDPKAIEKIKNQKTIIYPNGFNITWGNDNRYWRLPRQSRNLKESSAAAELLQVSWFEVTCSTDNVDVGKSYRVGFNLSMTVAAFGWKGCEVYIMAKIGKAGKFVYKKVCLDTRCSDQNKFNMPEDDLIITVNPPPSSPGDNRLYFGMYEVWSGRWKGGLKIHHAFVEKVGN 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12337293 12338527 + CePI673135_01g009530.1 Cec01g0953 194170
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0953 183 Pfam Phloem protein 2 26 175 IPR025886 -
Cec01g0953 183 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN 24 176 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0953 Cec-Chr1:12337293 Cec04g2297 Cec-Chr4:40595075 5.90E-32 dispersed
Cec01g0952 Cec-Chr1:12192697 Cec01g0953 Cec-Chr1:12337293 1.80E-89 tandem
Cec01g0953 Cec-Chr1:12337293 Cec01g0954 Cec-Chr1:12359722 1.30E-66 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0953 - - - 0.0