Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0954 ATGGCTAACTTTTCAAAACCCCATTATGATGCTGATCCAAGGGCCGTAGAAACTATCAAGGGCTGCAGAACTGTATTTTATCCGAGAGCGTTCAACATCACATGGGGCAATGACAATCGCTATTGGCGTTTTCCTCGTCAAAGCATTAATTTGAAGGACCCAAAATCGGCTGTGCAACTATTGCAAGTGAGTTGGCTAGAAGTGACTTGTTCAACAGACAATGTGGAGGCTGGCAAGACCTATAAAGTGGGCTTCAATGTATCACTTCAACCAGATGCATTTGGGTGGAATGAGCTTGAAGTTTTCATAATGGCCAAGATTGGAAAAAAGGGAAACTACATTTTCAAGAAGACTAATCTTGGGAACAAACCTACAAACTCTACAAAGTTTAGTGTTCCCGAGGAGGGTTTGGAAATGGAAGTTGTTGCACCACCAAGCTCCCCAGGAGATTGCAGGCTCTATTTTGGACTTTATGAAGTTTGGAGTGGCAAATGGAAGGGAGGCCTGCAGATTCATAATGCTTTTGTTGAGAAAGTTTGA 540 42.78 MANFSKPHYDADPRAVETIKGCRTVFYPRAFNITWGNDNRYWRFPRQSINLKDPKSAVQLLQVSWLEVTCSTDNVEAGKTYKVGFNVSLQPDAFGWNELEVFIMAKIGKKGNYIFKKTNLGNKPTNSTKFSVPEEGLEMEVVAPPSSPGDCRLYFGLYEVWSGKWKGGLQIHNAFVEKV 179
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 12359722 12361071 + CePI673135_01g009540.1 Cec01g0954 194171
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0954 179 PANTHER F-BOX DOMAIN-CONTAINING PROTEIN 23 174 - -
Cec01g0954 179 Pfam Phloem protein 2 25 173 IPR025886 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0938 Cec-Chr1:11858258 Cec01g0954 Cec-Chr1:12359722 1.50E-48 dispersed
Cec01g0939 Cec-Chr1:11876853 Cec01g0954 Cec-Chr1:12359722 2.80E-48 dispersed
Cec01g0952 Cec-Chr1:12192697 Cec01g0954 Cec-Chr1:12359722 4.90E-58 dispersed
Cec01g0954 Cec-Chr1:12359722 Cec04g2297 Cec-Chr4:40595075 2.20E-31 dispersed
Cec01g0953 Cec-Chr1:12337293 Cec01g0954 Cec-Chr1:12359722 1.30E-66 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0954 - - - 0.0