Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0976 ATGGCTGCCGGGACATCTTTCTTGAGGCAATGTATAGCTACGACTACAAGAACATTGGTGACTGCGAAATTGAAACATTCAAGCAACCATTTCACGACTTTTCTCCTCCCACTTCGCACTCGCTCTCGAAGATTGACCATTCGTGCTGGTATCACAAACAATGAAGAAGTTGCTGCTAAAGCAGCTGCATCTGATGCAGACAGTGGAGCTCCAACCATATTTGACAAAATAATAGCCAAGGAAATTCCTTCGAACATTGTTTATGAGGATGATAAAGTCCTTGCATTCCGAGACATAAATCCACAGGCTCCTGTTCATGTATTAATCATTCCAAAGCTCAGACATGGATTGACAGAGCTGGGAAAGGCTGAAGCAAGACATGGAGAGATACTGGGTCAGCTGCTGTATGCAGCCAAAATAGTGGCTGAAAAAGAGGGTATTGTTGAAGGATTTCGAGTAGTCATCAACAGTGGGGCAAGTGCTTGTCAATCTGTGTATCATCTTCACTTGCATGTCCTGGGAGGGAGACAGATGAAATGGCCACCAGGTTGA 552 44.57 MAAGTSFLRQCIATTTRTLVTAKLKHSSNHFTTFLLPLRTRSRRLTIRAGITNNEEVAAKAAASDADSGAPTIFDKIIAKEIPSNIVYEDDKVLAFRDINPQAPVHVLIIPKLRHGLTELGKAEARHGEILGQLLYAAKIVAEKEGIVEGFRVVINSGASACQSVYHLHLHVLGGRQMKWPPG 183
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13154031 13158397 + CePI673135_01g009760.1 Cec01g0976 194193
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0976 183 PANTHER HISTIDINE TRIAD HIT PROTEIN 52 183 IPR001310 GO:0005737(PANTHER)|GO:0006790(PANTHER)|GO:0009150(PANTHER)|GO:0016787(PANTHER)|GO:0047627(PANTHER)
Cec01g0976 183 Gene3D - 53 183 IPR036265 -
Cec01g0976 183 FunFam Histidine triad nucleotide-binding protein 1 53 183 - -
Cec01g0976 183 SUPERFAMILY HIT-like 71 182 IPR036265 -
Cec01g0976 183 ProSitePatterns HIT domain signature. 156 174 IPR019808 -
Cec01g0976 183 Pfam HIT domain 80 177 IPR011146 GO:0003824(InterPro)
Cec01g0976 183 CDD PKCI_related 71 175 - -
Cec01g0976 183 ProSiteProfiles HIT domain profile. 73 183 IPR011146 GO:0003824(InterPro)
Cec01g0976 183 PRINTS Histidine triad family signature 94 112 IPR001310 -
Cec01g0976 183 PRINTS Histidine triad family signature 163 173 IPR001310 -
Cec01g0976 183 PRINTS Histidine triad family signature 73 89 IPR001310 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0976 Cec-Chr1:13154031 Cec10g1706 Cec-Chr10:31548881 2.10E-45 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0976 - - - 0.0