Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g0977 ATGGCGCGAAAATCTTCTCTCCTCAAGCGAACCCTAGCTTCTCTCTGCTTTATTCTCGCCCTATATGCCATTGTTAACACCTTCATCAGCTCCACAGCCACTCTCAAGCTCGACCGCTCCTTCCCCTTCAGCACTGCCAATTCCGTTATGGTCTCCGACGAATTTAGTTCCCAAGACACTGATCTCCTCAACACCTCTGCGAAATCCGTCTCTCCGGTCAAGATTTACCTCTACGATGTGCCCACCAGGTTTACGTACGGTGTAATTGAGAACCACGGCATAGCGCGCGGAGGAAAATCCGTCCCTAAAGTCACGGACCTTAAGTATCCAGGCCATCAGCATATGGCCGAGTGGTATCTGTTCACGGATCTGCTTCGACCGGAGTCGGAGCGTATTGGGTCTGCTGTGGTTAGGGTTTTCGATCCGGAGGAAGCGGATTTGTATTATGTACCGTTCTTCTCGTCCTTAAGCTTGATCGTCAACCCTATCCGACCTGCAACGGGGTCGGATCAGCAGCAACGGAAGCTTGTGTACAGTGACGAGGAGACGCAGGATGCCTTCATGGAGTGGTTGGAGAAGCAGGAGTACTGGAAGCGGAACTATGGGCGGGATCACGTCATTGTAGCGCAGGACCCTAATGCATTGTACAGGGTGATTGATAGGGTTAAGAACAGTATCTTGCTCGTTTCGGATTTCGGCCGGTTGAGGGCTGACCAAGCCTCGCTAGTTAAGGACGTGATTTTACCATACTCCCATAGGATCAATACTTATAATGGTGACATCGGAGTTGAGAATCGCAAGACTTTATTGTTCTTCATGGGCAATCGATTCCGTAAAGAGGGAGGAAAGATACGTGATATGCTTTTCGATATTCTTGAGGAAGAACGGGATGTCATAATCAAACATGGAACACAATCACGAGAGAGCCGGCGTGCTGCTACACATGGGATGCATACATCTAAGTTCTGCTTGAATCCAGCTGGTGACACTCCCTCTGCGTGTCGACTTTTTGATTCTGTAGTAAGCTTATGTGTACCAGTGATTGTCAGCGATAGTATTGAGTTGCCTTTCGAAGATGTTATAGATTACTCCAAGATTGCGGTGTTTTTTGATTCGGTTTCTGCTGTGAAACCTGGATTTCTGATTTCAAAGCTGAGGAGAATATCCAAAGAGAGGATTCTGGAGTATCAGAGAGAAATGAAAGAGATAAAGAGATACTTTGAGTATACAGACTCAAATGGCACAGTGAACGAAATATGGCGCCAAATCTCGCAGAAGTTACCTCTAATTAAGCTAATGATTAATCGCGGAAGGAGGCTCATTCATAGAGATGGTGATGAACCAGACTGCTCTTGTCTCTGTTCAAACCAAACTGGCATCAGGGCTAGACTATAA 1395 47.03 MARKSSLLKRTLASLCFILALYAIVNTFISSTATLKLDRSFPFSTANSVMVSDEFSSQDTDLLNTSAKSVSPVKIYLYDVPTRFTYGVIENHGIARGGKSVPKVTDLKYPGHQHMAEWYLFTDLLRPESERIGSAVVRVFDPEEADLYYVPFFSSLSLIVNPIRPATGSDQQQRKLVYSDEETQDAFMEWLEKQEYWKRNYGRDHVIVAQDPNALYRVIDRVKNSILLVSDFGRLRADQASLVKDVILPYSHRINTYNGDIGVENRKTLLFFMGNRFRKEGGKIRDMLFDILEEERDVIIKHGTQSRESRRAATHGMHTSKFCLNPAGDTPSACRLFDSVVSLCVPVIVSDSIELPFEDVIDYSKIAVFFDSVSAVKPGFLISKLRRISKERILEYQREMKEIKRYFEYTDSNGTVNEIWRQISQKLPLIKLMINRGRRLIHRDGDEPDCSCLCSNQTGIRARL 464
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 13162547 13166653 - CePI673135_01g009770.1 Cec01g0977 194194
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g0977 464 PANTHER EXOSTOSIN HEPARAN SULFATE GLYCOSYLTRANSFERASE -RELATED 59 423 IPR004263 GO:0006486(InterPro)|GO:0016757(InterPro)
Cec01g0977 464 Pfam Exostosin family 71 384 IPR040911 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0977 Cec-Chr1:13162547 Cec09g1054 Cec-Chr9:10250003 1.40E-69 dispersed
Cec01g0977 Cec-Chr1:13162547 Cec08g1040 Cec-Chr8:22285993 1.20E-76 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g0977 K23200 - csv:101216577 876.315