Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1188 ATGGCCTCAAAGAGTTCGAAGCCTTCTGTAAAGCAACCTAAGGGGATAATTGGCGTTCAAGCTACGGATTTAGGTGATCTAAAGTCCTTACCTTCACAGACTTCATTGGGAAACAAAATTGGTTCTGTTATCTCTGGAGATGTATTGAACTCTACACAGAAATCCTTGAATCAGTCTACTTTGATTGATTCATCAAAGAGCAAATCCTCAAGTTTAAATCCTAAAGAGTCTACCGAGTCTTGTAATCAGAAAGTCAAAGAAAATTCCTCAAAGTCTGGCTCTAAGACGTTGACAGAAGGAGATCCTGCTCTTAGCGGGACTCGGGGCTTAGCAGAGGACTCTATAGATCCTGAGAAGAAAACATCGGAATGTGGGAGTGGGAAGGATAGTTCTGTTTCTGCCAAAGTCAGTGATGGAACAAACAGTATTGCCAAGACTAGTGGAAGTGCGAAAATTAGCGACCGTGTTGAGATGGTTGAGAGTGGCAAGAGCAGCATGTGTCGAGGAAGCACTAGCAGCGACATCAGTGACGAAAGCACCTGTAGCAGCTTTAGTAGTAGTATCAGTAAGCCTCACAAAGCAAATGACTTGAGATGGGAGGCCATCCAAGCTGTACGTGCAAGGGATGGGATGTTGGGATTAGGCCATTTTAGACTATTGAAGAGACTGGGATGTGGGGATATCGGAAGCGTCTACTTGTCGGAGTTGAGTGGTACTAAATGTTATTTTGCTATGAAGGTCATGGACAAAGGGTCTCTAGCAAGCCGAAAGAAGTTGCTTCGAGCTCAGACCGAAAGAGAAATATTGCAGTCTCTTGATCATCCATTCCTTCCTACATTATATACTCATTTTGAGACTGATAAGTTCTCATGCTTGGTGATGGAGTTCTGCCCTGGGGGAGACTTGCACACTCTAAGGCAGAGGCAGCCAGGGAAGCATTTTCCCGAGCAGGCGGTGAAATTTTATGTAGCAGAGGTTCTCCTAGCACTTGAGTATCTTCACATGCTTGGGATTGTATACCGGGACCTTAAGCCTGAGAATGTTCTTGTGAGGGAAGATGGACACATAATGCTTTCGGACTTTGATCTTTCATTAAGATGTGCAGTTAGTCCAACATTAGTGAAGGGTTCATGTTCTGAGTCTGAACCCTTGAGAAAGAATTCAGCTTATTGTGTTCAACCGGCTTGTATCGAACCTTCCTGCATCCAGCCATCCTGTGTAGTTCCTACGACATGCTTCTCTCCCCGACTTTTCTCTAGCAAATCAAAGAAGGATAGAAAACCCAAGACTGAAATAGGAAACCAGGTAACACCATTGCCAGAGCTCATTGCAGAGCCTACGGAGGCGAGATCAATGTCATTTGTTGGTACACACGAGTATTTGGCACCGGAGATCATTAAAGGCGAAGGTCATGGAAGTGCTGTTGACTGGTGGACTTTTGGAATCTTTCTATACGAACTGTTGTTTGGTAAAACTCCTTTTAAGGGATCTGGGAATCGAGCCACGTTGTTCAACGTTGTTGGTCAGCCTTTGCGGTTTCCTGAATCACCAGTTGTCAGTTTTGCTGCAAGGGATCTCATCAGGGGATTGCTTGTCAAGGAACCACAACATAGATTAGCTTACAAACGAGGGGCAACTGAGATCAAGCAACATCCCTTCTTTGAAGGTGTCAACTGGGCATTGATACGTTGCGCTTCACCACCAGAAGTACCAAAGCCTGTTGAGATTGAGAGGATACCCTCACCAGCACCTCCAGCGAGTGGAAAAGCTGTAATGGCTAGACCTGGTCCCGATTCCAAATCATCTGATAATTATCTCGAGTTTGATTTCTTTTAG 1836 44.83 MASKSSKPSVKQPKGIIGVQATDLGDLKSLPSQTSLGNKIGSVISGDVLNSTQKSLNQSTLIDSSKSKSSSLNPKESTESCNQKVKENSSKSGSKTLTEGDPALSGTRGLAEDSIDPEKKTSECGSGKDSSVSAKVSDGTNSIAKTSGSAKISDRVEMVESGKSSMCRGSTSSDISDESTCSSFSSSISKPHKANDLRWEAIQAVRARDGMLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKGSCSESEPLRKNSAYCVQPACIEPSCIQPSCVVPTTCFSPRLFSSKSKKDRKPKTEIGNQVTPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIERIPSPAPPASGKAVMARPGPDSKSSDNYLEFDFF 611
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 18882728 18885033 - CePI673135_01g011880.1 Cec01g1188 194405
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1188 611 PANTHER FLIPPASE KINASE 1-RELATED 84 574 - GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER)
Cec01g1188 611 MobiDBLite consensus disorder prediction 56 174 - -
Cec01g1188 611 MobiDBLite consensus disorder prediction 56 101 - -
Cec01g1188 611 Gene3D Transferase(Phosphotransferase) domain 1 448 572 - -
Cec01g1188 611 MobiDBLite consensus disorder prediction 1 41 - -
Cec01g1188 611 Gene3D Transferase(Phosphotransferase) domain 1 301 369 - -
Cec01g1188 611 Gene3D Phosphorylase Kinase; domain 1 215 300 - -
Cec01g1188 611 ProSitePatterns Serine/Threonine protein kinases active-site signature. 338 350 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1188 611 MobiDBLite consensus disorder prediction 26 41 - -
Cec01g1188 611 FunFam Serine/threonine-protein kinase AGC1-7 447 572 - -
Cec01g1188 611 MobiDBLite consensus disorder prediction 579 604 - -
Cec01g1188 611 CDD STKc_phototropin_like 216 577 - -
Cec01g1188 611 FunFam Serine/threonine-protein kinase D6PK-like 215 300 - -
Cec01g1188 611 FunFam serine/threonine-protein kinase D6PK-like 301 368 - -
Cec01g1188 611 Pfam Protein kinase domain 218 367 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1188 611 Pfam Protein kinase domain 451 554 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1188 611 SMART serkin_6 217 554 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1188 611 ProSiteProfiles Protein kinase domain profile. 217 554 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1188 611 MobiDBLite consensus disorder prediction 126 149 - -
Cec01g1188 611 SUPERFAMILY Protein kinase-like (PK-like) 193 582 IPR011009 -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1188 Cec-Chr1:18882728 Cec10g1395 Cec-Chr10:28259783 2.10E-198 dispersed
Cec01g1188 Cec-Chr1:18882728 Cec04g1828 Cec-Chr4:37009330 1.20E-225 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71689 PF00069 Pkinase 9.50E-37 CL0016 Cec PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1188 K08286 - csv:101213662 1095.49