Gene search
Sequence information
| Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
|---|---|---|---|---|---|---|
| Cec01g1188 | ATGGCCTCAAAGAGTTCGAAGCCTTCTGTAAAGCAACCTAAGGGGATAATTGGCGTTCAAGCTACGGATTTAGGTGATCTAAAGTCCTTACCTTCACAGACTTCATTGGGAAACAAAATTGGTTCTGTTATCTCTGGAGATGTATTGAACTCTACACAGAAATCCTTGAATCAGTCTACTTTGATTGATTCATCAAAGAGCAAATCCTCAAGTTTAAATCCTAAAGAGTCTACCGAGTCTTGTAATCAGAAAGTCAAAGAAAATTCCTCAAAGTCTGGCTCTAAGACGTTGACAGAAGGAGATCCTGCTCTTAGCGGGACTCGGGGCTTAGCAGAGGACTCTATAGATCCTGAGAAGAAAACATCGGAATGTGGGAGTGGGAAGGATAGTTCTGTTTCTGCCAAAGTCAGTGATGGAACAAACAGTATTGCCAAGACTAGTGGAAGTGCGAAAATTAGCGACCGTGTTGAGATGGTTGAGAGTGGCAAGAGCAGCATGTGTCGAGGAAGCACTAGCAGCGACATCAGTGACGAAAGCACCTGTAGCAGCTTTAGTAGTAGTATCAGTAAGCCTCACAAAGCAAATGACTTGAGATGGGAGGCCATCCAAGCTGTACGTGCAAGGGATGGGATGTTGGGATTAGGCCATTTTAGACTATTGAAGAGACTGGGATGTGGGGATATCGGAAGCGTCTACTTGTCGGAGTTGAGTGGTACTAAATGTTATTTTGCTATGAAGGTCATGGACAAAGGGTCTCTAGCAAGCCGAAAGAAGTTGCTTCGAGCTCAGACCGAAAGAGAAATATTGCAGTCTCTTGATCATCCATTCCTTCCTACATTATATACTCATTTTGAGACTGATAAGTTCTCATGCTTGGTGATGGAGTTCTGCCCTGGGGGAGACTTGCACACTCTAAGGCAGAGGCAGCCAGGGAAGCATTTTCCCGAGCAGGCGGTGAAATTTTATGTAGCAGAGGTTCTCCTAGCACTTGAGTATCTTCACATGCTTGGGATTGTATACCGGGACCTTAAGCCTGAGAATGTTCTTGTGAGGGAAGATGGACACATAATGCTTTCGGACTTTGATCTTTCATTAAGATGTGCAGTTAGTCCAACATTAGTGAAGGGTTCATGTTCTGAGTCTGAACCCTTGAGAAAGAATTCAGCTTATTGTGTTCAACCGGCTTGTATCGAACCTTCCTGCATCCAGCCATCCTGTGTAGTTCCTACGACATGCTTCTCTCCCCGACTTTTCTCTAGCAAATCAAAGAAGGATAGAAAACCCAAGACTGAAATAGGAAACCAGGTAACACCATTGCCAGAGCTCATTGCAGAGCCTACGGAGGCGAGATCAATGTCATTTGTTGGTACACACGAGTATTTGGCACCGGAGATCATTAAAGGCGAAGGTCATGGAAGTGCTGTTGACTGGTGGACTTTTGGAATCTTTCTATACGAACTGTTGTTTGGTAAAACTCCTTTTAAGGGATCTGGGAATCGAGCCACGTTGTTCAACGTTGTTGGTCAGCCTTTGCGGTTTCCTGAATCACCAGTTGTCAGTTTTGCTGCAAGGGATCTCATCAGGGGATTGCTTGTCAAGGAACCACAACATAGATTAGCTTACAAACGAGGGGCAACTGAGATCAAGCAACATCCCTTCTTTGAAGGTGTCAACTGGGCATTGATACGTTGCGCTTCACCACCAGAAGTACCAAAGCCTGTTGAGATTGAGAGGATACCCTCACCAGCACCTCCAGCGAGTGGAAAAGCTGTAATGGCTAGACCTGGTCCCGATTCCAAATCATCTGATAATTATCTCGAGTTTGATTTCTTTTAG | 1836 | 44.83 | MASKSSKPSVKQPKGIIGVQATDLGDLKSLPSQTSLGNKIGSVISGDVLNSTQKSLNQSTLIDSSKSKSSSLNPKESTESCNQKVKENSSKSGSKTLTEGDPALSGTRGLAEDSIDPEKKTSECGSGKDSSVSAKVSDGTNSIAKTSGSAKISDRVEMVESGKSSMCRGSTSSDISDESTCSSFSSSISKPHKANDLRWEAIQAVRARDGMLGLGHFRLLKRLGCGDIGSVYLSELSGTKCYFAMKVMDKGSLASRKKLLRAQTEREILQSLDHPFLPTLYTHFETDKFSCLVMEFCPGGDLHTLRQRQPGKHFPEQAVKFYVAEVLLALEYLHMLGIVYRDLKPENVLVREDGHIMLSDFDLSLRCAVSPTLVKGSCSESEPLRKNSAYCVQPACIEPSCIQPSCVVPTTCFSPRLFSSKSKKDRKPKTEIGNQVTPLPELIAEPTEARSMSFVGTHEYLAPEIIKGEGHGSAVDWWTFGIFLYELLFGKTPFKGSGNRATLFNVVGQPLRFPESPVVSFAARDLIRGLLVKEPQHRLAYKRGATEIKQHPFFEGVNWALIRCASPPEVPKPVEIERIPSPAPPASGKAVMARPGPDSKSSDNYLEFDFF | 611 |
Gff information
| Chromosome | Start | End | Strand | Old_gene | Gene | Num |
|---|---|---|---|---|---|---|
| 1 | 18882728 | 18885033 | - | CePI673135_01g011880.1 | Cec01g1188 | 194405 |
Annotation information
| Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
|---|---|---|---|---|---|---|---|---|
| Cec01g1188 | 611 | PANTHER | FLIPPASE KINASE 1-RELATED | 84 | 574 | - | GO:0004674(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0005886(PANTHER)|GO:0006468(PANTHER) | |
| Cec01g1188 | 611 | MobiDBLite | consensus disorder prediction | 56 | 174 | - | - | |
| Cec01g1188 | 611 | MobiDBLite | consensus disorder prediction | 56 | 101 | - | - | |
| Cec01g1188 | 611 | Gene3D | Transferase(Phosphotransferase) domain 1 | 448 | 572 | - | - | |
| Cec01g1188 | 611 | MobiDBLite | consensus disorder prediction | 1 | 41 | - | - | |
| Cec01g1188 | 611 | Gene3D | Transferase(Phosphotransferase) domain 1 | 301 | 369 | - | - | |
| Cec01g1188 | 611 | Gene3D | Phosphorylase Kinase; domain 1 | 215 | 300 | - | - | |
| Cec01g1188 | 611 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 338 | 350 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
| Cec01g1188 | 611 | MobiDBLite | consensus disorder prediction | 26 | 41 | - | - | |
| Cec01g1188 | 611 | FunFam | Serine/threonine-protein kinase AGC1-7 | 447 | 572 | - | - | |
| Cec01g1188 | 611 | MobiDBLite | consensus disorder prediction | 579 | 604 | - | - | |
| Cec01g1188 | 611 | CDD | STKc_phototropin_like | 216 | 577 | - | - | |
| Cec01g1188 | 611 | FunFam | Serine/threonine-protein kinase D6PK-like | 215 | 300 | - | - | |
| Cec01g1188 | 611 | FunFam | serine/threonine-protein kinase D6PK-like | 301 | 368 | - | - | |
| Cec01g1188 | 611 | Pfam | Protein kinase domain | 218 | 367 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cec01g1188 | 611 | Pfam | Protein kinase domain | 451 | 554 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cec01g1188 | 611 | SMART | serkin_6 | 217 | 554 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cec01g1188 | 611 | ProSiteProfiles | Protein kinase domain profile. | 217 | 554 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
| Cec01g1188 | 611 | MobiDBLite | consensus disorder prediction | 126 | 149 | - | - | |
| Cec01g1188 | 611 | SUPERFAMILY | Protein kinase-like (PK-like) | 193 | 582 | IPR011009 | - |
Duplication type information
| Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
|---|---|---|---|---|---|---|
| Cec01g1188 | Cec-Chr1:18882728 | Cec10g1395 | Cec-Chr10:28259783 | 2.10E-198 | dispersed | |
| Cec01g1188 | Cec-Chr1:18882728 | Cec04g1828 | Cec-Chr4:37009330 | 1.20E-225 | transposed |
Transcription factors information
| Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
|---|---|---|---|---|---|---|---|
| 71689 | PF00069 | Pkinase | 9.50E-37 | CL0016 | Cec | PK |
Pathway information
| Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
|---|---|---|---|---|---|---|
| Cec01g1188 | K08286 | - | csv:101213662 | 1095.49 |