Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1339 ATGTTGAACAAAGCGACGGAGAAGGGTGTCGAGGGGCTGTTTTCAGAAGATGCAAATGCTCAAGGAGATTCAAATCCGAATCCTCTTTTGAAAGTGTTGTTTGAGCAAGCTCCGCCTTTTGATAGAGGCTATTCCTTAGGTCTTGCTATTGGGTCTTGCTCCTACTCCTATTTGATGGTAAGCACAGTTGGCAATATGAGCCAAGTAAGTCCTCTTTCTTTGGTTTCTTATCCTCCGTCCGAGTTGGGGTTGCTTGAGAGTGGGGCTGGTGTCATTCCGTCCAATTTGCTGTTTTCGTTTCCTTGTAATGTGGGTGGGGGAGATGGTAGGTGGCTGGTGTTTGATCCTTTGGTTCATGCTGCAGGTTATAGGTCAAGGGGTGATGGTATGCTTCTTACCAATGGGGGTGTTCTTGGAGCTCCTTTAGCTACTCCTAGTTCTCTTGATTCTCAGACCTCATGGTCGAGTATTGGCATTGAAAACCCGGGGTGGGCCGCTCTACCCTTGGTGGGAATCAAACAACTAAAGGTGATTGATGACATAATTTCTCGTGGATGCTTGCCAATGATAGTGGGTGGAACAAATTATTATATACAGGCTCTTGTTAGCCCGTTTCTTCTGGATGATTCTGCCGGAAATGTTGGTGGAAGTTGCTCCATTTATCCTGGAGATGAAGAGCTGGGTATTGAGTTGAATGAGGGAAGAGATGGTTTGAAGTATGACCATAACCATCTTAAAGAGATTGATCCAGTTTCGGCTGACAGAATCCATCCTAATAACCATAGAAAAATAAATCAATACCTGAGTTTGTATTACCGCACTGGTGTTCTTCCCAGCACACTTTTTCAAGGAACGGCTAATGAGGTATGGATCTTCTTTCCATTGAGCTATGTAACCATGGAATGGCAGAATTGGGGTCAAGCTGATAGTTTCAGATATGATTGCTGCTTGATATGTGTCGATGCTTCTGTTCCACAACTTGATGGACATGTTGATTCTAGAGTTGATAGCATGATGGCTGCTGGATTACTTGATGAGGTTTATGACATTTACAATCCAAATGCAAACTATACTAAAGGAATGCGTCAAGCTATTGGTGTTCGGGAGTTTGAAGAGTTTTTGAGATATTATGTACCTAAAGGTAGATGCGAAAAAGATAGTGCTGGCCTTAGCCCAAAAAAAATAATGGAGTGCAATAAGATTGAGAATATAAGGTCAATCCTGAATTCACCAAGTAATAGCCAACCCAGTTTGCTACTGAAAGAAGCCATAGATAATGTAAAGTTGAATACTAGAAGACTGGTTCGTCGTCAGAGGAGGCAGCTAAAGAGACTGGAGACTTTGTTTGGATGGAAGATCCACTATGTTGATTCCACGCAATATATAACATGCAAAGTGGAGGATTCATGGACTGCACAAGTCGTTGAACCTGCAGTCCAGATAATTAGGTCTTTCCTTAAAGATGGTTCGGGGACTGAAACAATAAACCCGCATAGTTCAGGGCAAACAATCAAGAAGGACGTGTGGACACAATATATATGCCAGGCTTGTGGGAATAAAGTACTAAGAGGAGCACATGAATGGGAACAACACAATCAAGGTCGCACACATCGAAAACGAATTTATCGGCTTAAGAAGAAGTGTGAAGGGCTTTCCTTGCTGCAACAGAAACTACCTCTTCAAGAATAA 1689 42.69 MLNKATEKGVEGLFSEDANAQGDSNPNPLLKVLFEQAPPFDRGYSLGLAIGSCSYSYLMVSTVGNMSQVSPLSLVSYPPSELGLLESGAGVIPSNLLFSFPCNVGGGDGRWLVFDPLVHAAGYRSRGDGMLLTNGGVLGAPLATPSSLDSQTSWSSIGIENPGWAALPLVGIKQLKVIDDIISRGCLPMIVGGTNYYIQALVSPFLLDDSAGNVGGSCSIYPGDEELGIELNEGRDGLKYDHNHLKEIDPVSADRIHPNNHRKINQYLSLYYRTGVLPSTLFQGTANEVWIFFPLSYVTMEWQNWGQADSFRYDCCLICVDASVPQLDGHVDSRVDSMMAAGLLDEVYDIYNPNANYTKGMRQAIGVREFEEFLRYYVPKGRCEKDSAGLSPKKIMECNKIENIRSILNSPSNSQPSLLLKEAIDNVKLNTRRLVRRQRRQLKRLETLFGWKIHYVDSTQYITCKVEDSWTAQVVEPAVQIIRSFLKDGSGTETINPHSSGQTIKKDVWTQYICQACGNKVLRGAHEWEQHNQGRTHRKRIYRLKKKCEGLSLLQQKLPLQE 562
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 26328769 26344113 + CePI673135_01g013390.1 Cec01g1339 194556
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1339 562 FunFam tRNA dimethylallyltransferase 507 549 - -
Cec01g1339 562 Gene3D - 225 285 - -
Cec01g1339 562 Gene3D Classic Zinc Finger 511 550 - -
Cec01g1339 562 Pfam IPP transferase 175 443 - -
Cec01g1339 562 Gene3D - 169 510 IPR027417 -
Cec01g1339 562 PANTHER TRNA DIMETHYLALLYLTRANSFERASE 175 498 IPR039657 GO:0005739(PANTHER)|GO:0006400(PANTHER)|GO:0052381(PANTHER)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1285 Cec-Chr1:23439524 Cec01g1339 Cec-Chr1:26328769 6.90E-24 dispersed
Cec01g1339 Cec-Chr1:26328769 Cec07g0049 Cec-Chr7:564270 1.40E-20 dispersed
Cec01g1339 Cec-Chr1:26328769 Cec06g0584 Cec-Chr6:6481867 1.70E-21 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1339 K00791 - csv:101202758 638.647