Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1374 ATGGCGCTCTCTCTATCCCTACAACTTATCCGTTTCCCTCCTCAACCATTATCCTCATCCTCTCAACATCTTCTCATCTCTGACCTCGCCTCCGTCTCGCGCTTCTTCCGATCTCCATGTCTTTCCTCTTTGGCTCCGTCGCGGAGCTGCACGATGAAGTTATCTTCCAGAACCAAGTGTTTCTCCATGTCCACCGAGGAGGAGCAGTGGAGCGAATCGGAAGCGTTGGTGTCCGATGTGGACGGAGGGGGAGATCTTGAGGATGATATTGATATTGGTGTTCAGGAAGACAGCTCTGTGGCCACTGCTGCTTCTGCGCAGAAAAATTCTGTCTCGTCGCCGAGTGATTATCTGTCGCTTGCGATCCGAGAGCAGGTTTATGAGGTGTTAGAGGTTAAAGATGATGGAACCGTATCTACCAGGAAGGTTAACAGACGGCAACTATTGAAGTCAAGTGGGCTTCGTCCACGTGATATCCGAAGTGTTGATCCATCTTTATTTTTGACAAACTCAATGCCTACATTACTGGTCCGTGAACATGCTATTTTGCTTAATCTGGGATCATTGAGAGCAATAGCTATGCAGGATTGTGTCCTCATATTCGATTATAACCGTCCAGGAGGACAAGCTTTTATTGAATCATTGTTGCCTCGATTGAACCCAAAAAACATGAATGGAGTGCCAGCAATGCCATTTGAACTTGAGGTTGTTGAAGCTGCATTGCTTTCACGAACTCAGCGTTTGGAGCAGCGACTAATGAAAGTAGAACCTCGTGTTCAAGCTCTGCTTGAGGTATTGCCCAACAAATTAACTGCAGATGTGTTGGAACAACTTCGTATTAGCAAGCAGACATTGGTTGAATTAGGGTCCAGGGCAGGGGCTCTTAGACAAATGCTTCTTGATCTTCTGGAGGATCCGCAAGAAATACGACGCATCTGTATTATGGGAAGAAATTGCACGCTTAATAAAAGAAATGATGATGTGGAGTGCTCTCTTCCTTTGGATAAGCAGATTGCGGATGAAGAGGAAGAAGAAATAGAAATGCTGTTGGAAAATTATCTCCAGAGATGCGAATCTTGTCATGGTCAGGCTGAAAGGCTTCTGGATTCAGCAAAAGAAATGGAAGATTCAATTGCCGTAAATTTGAGCTCGCGGCGACTAGAGGTTAGCAGAGTGGAGTTGCTTCTCCAAGTTGGGACATTTTGTGTGGCAGTTGGTGCTTTAGTTGCAGGAATATTCGGCATGAACTTACGATCATACCTTGAAGAACACGTGTTTGCCTTCTGGTTAACAACAGCTGGGATAATTGTTGGGGCTCTAAGTACTTGTTCAGGTCATTCAACACTCAATCTAGGAGGCCTATATCCCAGTGATGAGGATGCAAATTGTGAAGGATCCATGGCACTTATCGACACTACTCTCTGCGACAACGACGGTCTCAGCACAGACGACAGTGTGAGGCAGTCGATGGCGTATGGTGAACTACAGTCGAGTAGAATGACACGAACAATGACGTGA 1518 45.92 MALSLSLQLIRFPPQPLSSSSQHLLISDLASVSRFFRSPCLSSLAPSRSCTMKLSSRTKCFSMSTEEEQWSESEALVSDVDGGGDLEDDIDIGVQEDSSVATAASAQKNSVSSPSDYLSLAIREQVYEVLEVKDDGTVSTRKVNRRQLLKSSGLRPRDIRSVDPSLFLTNSMPTLLVREHAILLNLGSLRAIAMQDCVLIFDYNRPGGQAFIESLLPRLNPKNMNGVPAMPFELEVVEAALLSRTQRLEQRLMKVEPRVQALLEVLPNKLTADVLEQLRISKQTLVELGSRAGALRQMLLDLLEDPQEIRRICIMGRNCTLNKRNDDVECSLPLDKQIADEEEEEIEMLLENYLQRCESCHGQAERLLDSAKEMEDSIAVNLSSRRLEVSRVELLLQVGTFCVAVGALVAGIFGMNLRSYLEEHVFAFWLTTAGIIVGALSTCSGHSTLNLGGLYPSDEDANCEGSMALIDTTLCDNDGLSTDDSVRQSMAYGELQSSRMTRTMT 505
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 27562496 27573307 + CePI673135_01g013740.1 Cec01g1374 194591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1374 505 PANTHER RNA SPLICING PROTEIN MRS2, MITOCHONDRIAL 103 443 IPR039204 GO:0009941(PANTHER)|GO:0015095(PANTHER)|GO:0015693(PANTHER)
Cec01g1374 505 FunFam Magnesium transporter MRS2-11, chloroplastic 122 203 - -
Cec01g1374 505 Coils Coil 336 356 - -
Cec01g1374 505 Pfam Magnesium transporter MRS2-like 132 386 - -
Cec01g1374 505 Gene3D Magnesium transport protein CorA, transmembrane region 206 387 - -
Cec01g1374 505 FunFam Magnesium transporter MRS2-11, chloroplastic 205 387 - -
Cec01g1374 505 Gene3D - 119 203 - -
Cec01g1374 505 CDD Mrs2_Mfm1p-like 129 440 IPR039204 -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1374 K16075 - csv:101219314 724.931