Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec01g1438 | ATGGGATCAACAACAACAAACAGCCATTATTATAGCCCTTGTGCAGCTTGCAAATTCCTAAGAAGAAAATGCTTAGAAGGATGTGTTTTTGCACCCTATTTTCCACCTGAAGAACCCCAAAAATTTGCCAATGTCCACAAGGTATTCGGAGCGAGTAACGTTGCGAAGCTCCTGAACGACATTCTTCCTCATCAACGACAAGATGCCGTCGTTTCGCTCGCCTATGAAGCCGAGGTGAGAATCAGAGATCCTGTTTATGGCTGTGTTGGAGCAATTTCTTTCCTCCAAAAACAGGTCCAAAGGCTCCAAAAAGAACTTGATGCTGCTAAAGCTTGCCTTTTTCTCTACTCTTGCACTGATTTCTCAACTCCCCTTTTGCCTCCTCACCCTCAGATTATTACTACTCCTCATCCACTGATTTGGAATAATAATCTTAATCTTAATAATAATAATAATCATGATATTACTAATTCTTCTATGTATTTTAATGGAGGAATTTGA | 501 | 39.92 | MGSTTTNSHYYSPCAACKFLRRKCLEGCVFAPYFPPEEPQKFANVHKVFGASNVAKLLNDILPHQRQDAVVSLAYEAEVRIRDPVYGCVGAISFLQKQVQRLQKELDAAKACLFLYSCTDFSTPLLPPHPQIITTPHPLIWNNNLNLNNNNNHDITNSSMYFNGGI | 166 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 29030843 | 29031343 | + | CePI673135_01g014380.1 | Cec01g1438 | 194655 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec01g1438 | 166 | Coils | Coil | 92 | 112 | - | - | |
Cec01g1438 | 166 | ProSiteProfiles | LOB domain profile. | 12 | 113 | IPR004883 | - | |
Cec01g1438 | 166 | Pfam | Lateral organ boundaries (LOB) domain | 13 | 110 | IPR004883 | - | |
Cec01g1438 | 166 | PANTHER | LOB DOMAIN-CONTAINING PROTEIN 4-RELATED | 12 | 118 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g1438 | Cec-Chr1:29030843 | Cec11g1157 | Cec-Chr11:23600517 | 4.40E-42 | dispersed | |
Cec01g1438 | Cec-Chr1:29030843 | Cec10g1403 | Cec-Chr10:28374804 | 1.10E-48 | wgd | |
Cec01g1438 | Cec-Chr1:29030843 | Cec06g1923 | Cec-Chr6:32617791 | 1.00E-51 | wgd | |
Cec01g1438 | Cec-Chr1:29030843 | Cec09g2038 | Cec-Chr9:37418146 | 4.20E-45 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
28912 | PF03195 | LOB | 1.00E-41 | No_clan | Cec | TF |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec01g1438 | - | - | - | 0.0 |