Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1461 ATGGAGGAAACATTTTTTCCGTTTCGTGGGATTAAGAATGATATAAAAGGAAGACTTCTGTGCTACAGACAGGATTGGACTGGAGGCTTTCGCGCTGGTATCAGGATCTTGGCCCCAACAACGTATATATTCTTTGCTTCAGCAATTCCGGTTATATCGTTTGGGGAGCAGCTAGAAAGGAATACATACGGGACTCTAACTGCCGTACAAACTCTAGCATCAACAGCACTTTGTGGCATTATCCACTCAGTCTTTGGGGGACAGCCTCTGCTTATCCTTGGTGTTGCTGAACCAACTGTTTTGATGTATACGTTCATGTTCGACTTTGCAAAGGACCGAAAGGAACTGGGACAGGAACTATTCTTAGCCTGGACAGGATGGGTATGTGTATGGACAGGCATCTTGCTTTTCTTGCTTGCGGTGTTGGGTGCATGCTCCCTGATCAATAGGTTCACACGTCTTGCTGGCGAATTGTTTGGTCTGCTAATTGCCATGCTCTTCATGCAGCAGGCAATACGTGGTGTTGTGGAGGAATTCGGCATACCCCAAAGGGAAAATCCTAATCAGGTGGCACTCCAACCTCCTTGGCGCTTTGGCAATGGAATGTTTGCATTAGTGCTGTCCTTCGGGCTTCTGCTAACTGCCCTTAAAAGCCGCAAGGCTAGATCATGGCGCTATGGGACTGGTTGCCTACGTGGCCTTATTGCTGATTATGGAGTTCCACTTATGGTGCTCGTATGGACAGCCTTATCTTACATTCCAGTCAACAATGTCCCACTTGGGATCCCAAGAAGGCTTTTCAGTCCCAATCCATGGTCTCAGGGTGCCTACTCAAATTGGACGGTTATAAAGGAAATGTTGAGAGTGCCTCCATTGTATATAGTTGGAGCATTCATACCAGCAACCATGATAGCAGTTCTTTACTACTTTGATCACAGTGTTGCATCTCAGCTTGCCCAACAGAAAGAGTTTAATTTGAAAAAACCAGCTTCATATCATTATGATCTTCTCCTCCTAGGTTTCCTTGTTATCCTGTGTGGACTTATTGGCATACCACCTTCTAATGGTGTAATTCCTCAGTCTCCGATGCACACAAAAAGCTTAGCTACCCTAAAACATCAGCTTTTGCGGAGCAAGCTGGTAGCAGCAGCGCGACAAAGTTTCCGTAAAAATTCGAACTTGAGTCAATTATACCGGAACATGCAAGAGGCATATAATGAGATTCAGACTCCTTTAATTTATCAAAATCCACCAGCTGTGGGGCTGAAGGAGTTGAAGGATTCCACGATCCAACTAGCTTCAAGAACTGGCTACATTGATGCACCTGTTGATGAAACTGTTTTCGATGTGGACAAAGATATTGATGATCTTCTGCCAGTAGAAGTTAAAGAACAACGTCTCAGCAATTTGCTTCAGGCAGTAATGGTTGGTGGTTGTGTTGCTGCTATGCCTCTTTTAAAGAAGATCCCGACTTCGGTTCTTTGGGGCTACTTCGCTTTCATGGCAATCGAGAGCTTACCCGGAAATCAATTTTGGGAAAGGATTTTACTTCTTTTCACTGCTCCGAACCGAAGATACAAGGTGCTGGAGGAATATCATGCAACCTTTCTAGAAACTGTCCCCTTCAAAACAATTGCCACCTTCACCTTGTTTCAGACAGTATATCTGCTGATGTGTTTTGGATTAACCTGGATTCCAATTGCTGGTGTTCTTTTTCCGCTGTTGATCATGCTTCTTGTCCCTGTGCGCCAGTATTTGCTCCCCAAGTCCTTCAAAGGTGCTCATCTTCAGGACTTGGATGCTGCTGAATATGAGGAAGCTCCTGCAGTCACTTTTAATCCGTCATTCGAAGATCGAATGGGAAGAACTCCCAACATTGATGACAGTGAAATACTCGACGAGATGATCACAAGAAGCCGTGGCGAGATTCGACGTACACAAAGTTCAAAAGTGACAAGCTCATCCCCAACTTCTCTAGAGGGCATCAAACCTGCCTACAGCCCACAGATACCACAGAAACTTTACAGTCCACGGATCAATGAGCTGAGAAGAGAGAGAAGTTCTCTATCTCCTGGAAAAGGACTTGAGTTTAAGCTAAATTCTAGTCCTAGTCCTAGTGAAGAACCAGGGCCAGGACCTTCTTTTAGAAATTAG 2154 44.85 MEETFFPFRGIKNDIKGRLLCYRQDWTGGFRAGIRILAPTTYIFFASAIPVISFGEQLERNTYGTLTAVQTLASTALCGIIHSVFGGQPLLILGVAEPTVLMYTFMFDFAKDRKELGQELFLAWTGWVCVWTGILLFLLAVLGACSLINRFTRLAGELFGLLIAMLFMQQAIRGVVEEFGIPQRENPNQVALQPPWRFGNGMFALVLSFGLLLTALKSRKARSWRYGTGCLRGLIADYGVPLMVLVWTALSYIPVNNVPLGIPRRLFSPNPWSQGAYSNWTVIKEMLRVPPLYIVGAFIPATMIAVLYYFDHSVASQLAQQKEFNLKKPASYHYDLLLLGFLVILCGLIGIPPSNGVIPQSPMHTKSLATLKHQLLRSKLVAAARQSFRKNSNLSQLYRNMQEAYNEIQTPLIYQNPPAVGLKELKDSTIQLASRTGYIDAPVDETVFDVDKDIDDLLPVEVKEQRLSNLLQAVMVGGCVAAMPLLKKIPTSVLWGYFAFMAIESLPGNQFWERILLLFTAPNRRYKVLEEYHATFLETVPFKTIATFTLFQTVYLLMCFGLTWIPIAGVLFPLLIMLLVPVRQYLLPKSFKGAHLQDLDAAEYEEAPAVTFNPSFEDRMGRTPNIDDSEILDEMITRSRGEIRRTQSSKVTSSSPTSLEGIKPAYSPQIPQKLYSPRINELRRERSSLSPGKGLEFKLNSSPSPSEEPGPGPSFRN 717
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
1 29254449 29259013 - CePI673135_01g014610.1 Cec01g1461 194678
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1461 717 MobiDBLite consensus disorder prediction 646 662 - -
Cec01g1461 717 Pfam HCO3- transporter integral membrane domain 460 602 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cec01g1461 717 Pfam HCO3- transporter integral membrane domain 7 180 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cec01g1461 717 Pfam HCO3- transporter integral membrane domain 202 372 IPR011531 GO:0006820(InterPro)|GO:0016020(InterPro)
Cec01g1461 717 PANTHER ANION EXCHANGE PROTEIN 6 638 IPR003020 GO:0005452(InterPro)|GO:0005886(PANTHER)|GO:0006820(InterPro)|GO:0016020(InterPro)|GO:0022857(PANTHER)|GO:0050801(PANTHER)|GO:0055085(PANTHER)
Cec01g1461 717 MobiDBLite consensus disorder prediction 638 717 - -
Cec01g1461 717 Gene3D Helical hairpin bin 18 60 - -
Cec01g1461 717 FunFam probable boron transporter 2 18 60 - -
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1461 Cec-Chr1:29254449 Cec10g1180 Cec-Chr10:25752664 0.00E+00 dispersed
Cec01g1461 Cec-Chr1:29254449 Cec07g1406 Cec-Chr7:29629289 2.10E-218 transposed
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1461 K24194 - csv:101203606 1368.99