Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1470 ATGAGGAATTTAAACTGGTTTAAGCCAATTTCGATTAATGGGAAGCCTGGGAGGAGGCTTTCACTAGGAGAATACCAGCGTGCTGTGTCGTGGTCTAAGTATTTGGTGTCTTCAGGAGCAGAGATAAAGGGAGAGGGAGAAGAGGAATGGAGTGCTGACATGTCCCAGTTGTTCATTGGCTTCAAATTTGCTACTGGAAGGCACAGTAGGATTTACAGAGGTGTGTATAAACAGAGGGATGTTGCAATTAAGCTGATAAGCCAGCCTGAGGAGGATGAAAATTTGGCTAACTTTCTTGAGAATCAGTTCATTTCAGAGGTGGCATTGCTGTTTCGATTGAGACATCCCAATATCATCACTTTCATTGCAGCTTGCAAGAAACCTCCAGTGTTTTGTATTATCACGGAGTATATGACAGGAGGTTCGTTAAGAAAATATCTCCATCAACAAGAGCCACATTCCGTTCCGCTGAACTTGGTTCTGAAACTAGCCCTCGAAATCTCACGTGGGATGCAGTACCTTCATTCTCAGGGAATACTCCACAGAGATCTCAAATCAGAAAATCTCTTACTCGGTGAAGATATGTGTGTTAAGGTAGCAGATTTCGGTATCTCATGCTTAGAATCTCAATGTGGAAGTGCGAAGGGATTCACCGGAACGTACCGCTGGATGGCACCTGAAATGATCAAAGAAAAACACCACACTAAGAAAGTTGATGTTTATAGCTTTGGCATTGTCTTATGGGAGCTCTTAACTGCATTGACACCATTTGATAACATGACTCCTGAACAGGCAGCATTTGCAGTCTGCCAGAAGAATGCAAGACCACCGCTGCCTTCTGCTTGCCCGCAGGCATTTCGTCATCTGATCAAGAGATGCTGGTCGAGAAATCCCAACAAGCGACCGCATTTTGATGAGATCGTTTCAATTTTGGAAACTTATGCGGAGTGTTACAATGAAGATCCAGATTTTTTTGGTCATTACGTCCCCTCGTCTAGATATACTGCTTTGCAATGCTTACCAAAATGTATTACCAAACAATTATCTGCTTCCTTGAAGCCTAGGAATTCTTCCTCATCTTGA 1083 43.12 MRNLNWFKPISINGKPGRRLSLGEYQRAVSWSKYLVSSGAEIKGEGEEEWSADMSQLFIGFKFATGRHSRIYRGVYKQRDVAIKLISQPEEDENLANFLENQFISEVALLFRLRHPNIITFIAACKKPPVFCIITEYMTGGSLRKYLHQQEPHSVPLNLVLKLALEISRGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWELLTALTPFDNMTPEQAAFAVCQKNARPPLPSACPQAFRHLIKRCWSRNPNKRPHFDEIVSILETYAECYNEDPDFFGHYVPSSRYTALQCLPKCITKQLSASLKPRNSSSS 360
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29367565 29369695 - CePI673135_01g014700.1 Cec01g1470 194687
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1470 360 SUPERFAMILY Protein kinase-like (PK-like) 46 311 IPR011009 -
Cec01g1470 360 CDD STKc_MAP3K-like 66 311 - -
Cec01g1470 360 PANTHER SERINE-THREONINE PROTEIN KINASE 55 312 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cec01g1470 360 ProSiteProfiles Protein kinase domain profile. 57 315 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1470 360 Pfam Protein tyrosine and serine/threonine kinase 63 311 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1470 360 ProSitePatterns Serine/Threonine protein kinases active-site signature. 179 191 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1470 360 Gene3D Phosphorylase Kinase; domain 1 47 139 - -
Cec01g1470 360 SMART serkin_6 57 315 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1470 360 PRINTS Tyrosine kinase catalytic domain signature 173 191 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1470 360 PRINTS Tyrosine kinase catalytic domain signature 135 148 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1470 360 PRINTS Tyrosine kinase catalytic domain signature 282 304 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1470 360 PRINTS Tyrosine kinase catalytic domain signature 238 260 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1470 360 PRINTS Tyrosine kinase catalytic domain signature 219 229 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1470 360 FunFam Serine/threonine-protein kinase isoform 1 47 139 - -
Cec01g1470 360 Gene3D Transferase(Phosphotransferase) domain 1 140 324 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1470 Cec-Chr1:29367565 Cec04g2011 Cec-Chr4:38272286 2.40E-93 dispersed
Cec02g0405 Cec-Chr2:3820343 Cec01g1470 Cec-Chr1:29367565 3.00E-66 transposed
Cec02g2035 Cec-Chr2:38101670 Cec01g1470 Cec-Chr1:29367565 1.40E-31 transposed
Cec04g1863 Cec-Chr4:37211515 Cec01g1470 Cec-Chr1:29367565 2.60E-111 transposed
Cec05g0566 Cec-Chr5:4600154 Cec01g1470 Cec-Chr1:29367565 1.00E-17 transposed
Cec05g1704 Cec-Chr5:28327378 Cec01g1470 Cec-Chr1:29367565 1.30E-67 transposed
Cec05g1735 Cec-Chr5:28899987 Cec01g1470 Cec-Chr1:29367565 8.10E-35 transposed
Cec10g0042 Cec-Chr10:495079 Cec01g1470 Cec-Chr1:29367565 1.60E-67 transposed
Cec11g1164 Cec-Chr11:23849824 Cec01g1470 Cec-Chr1:29367565 2.30E-79 transposed
Cec01g1470 Cec-Chr1:29367565 Cec10g1438 Cec-Chr10:28745843 4.00E-56 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71693 PF07714 PK_Tyr_Ser-Thr 7.20E-66 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1470 - - - 0.0