Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec01g1470 | ATGAGGAATTTAAACTGGTTTAAGCCAATTTCGATTAATGGGAAGCCTGGGAGGAGGCTTTCACTAGGAGAATACCAGCGTGCTGTGTCGTGGTCTAAGTATTTGGTGTCTTCAGGAGCAGAGATAAAGGGAGAGGGAGAAGAGGAATGGAGTGCTGACATGTCCCAGTTGTTCATTGGCTTCAAATTTGCTACTGGAAGGCACAGTAGGATTTACAGAGGTGTGTATAAACAGAGGGATGTTGCAATTAAGCTGATAAGCCAGCCTGAGGAGGATGAAAATTTGGCTAACTTTCTTGAGAATCAGTTCATTTCAGAGGTGGCATTGCTGTTTCGATTGAGACATCCCAATATCATCACTTTCATTGCAGCTTGCAAGAAACCTCCAGTGTTTTGTATTATCACGGAGTATATGACAGGAGGTTCGTTAAGAAAATATCTCCATCAACAAGAGCCACATTCCGTTCCGCTGAACTTGGTTCTGAAACTAGCCCTCGAAATCTCACGTGGGATGCAGTACCTTCATTCTCAGGGAATACTCCACAGAGATCTCAAATCAGAAAATCTCTTACTCGGTGAAGATATGTGTGTTAAGGTAGCAGATTTCGGTATCTCATGCTTAGAATCTCAATGTGGAAGTGCGAAGGGATTCACCGGAACGTACCGCTGGATGGCACCTGAAATGATCAAAGAAAAACACCACACTAAGAAAGTTGATGTTTATAGCTTTGGCATTGTCTTATGGGAGCTCTTAACTGCATTGACACCATTTGATAACATGACTCCTGAACAGGCAGCATTTGCAGTCTGCCAGAAGAATGCAAGACCACCGCTGCCTTCTGCTTGCCCGCAGGCATTTCGTCATCTGATCAAGAGATGCTGGTCGAGAAATCCCAACAAGCGACCGCATTTTGATGAGATCGTTTCAATTTTGGAAACTTATGCGGAGTGTTACAATGAAGATCCAGATTTTTTTGGTCATTACGTCCCCTCGTCTAGATATACTGCTTTGCAATGCTTACCAAAATGTATTACCAAACAATTATCTGCTTCCTTGAAGCCTAGGAATTCTTCCTCATCTTGA | 1083 | 43.12 | MRNLNWFKPISINGKPGRRLSLGEYQRAVSWSKYLVSSGAEIKGEGEEEWSADMSQLFIGFKFATGRHSRIYRGVYKQRDVAIKLISQPEEDENLANFLENQFISEVALLFRLRHPNIITFIAACKKPPVFCIITEYMTGGSLRKYLHQQEPHSVPLNLVLKLALEISRGMQYLHSQGILHRDLKSENLLLGEDMCVKVADFGISCLESQCGSAKGFTGTYRWMAPEMIKEKHHTKKVDVYSFGIVLWELLTALTPFDNMTPEQAAFAVCQKNARPPLPSACPQAFRHLIKRCWSRNPNKRPHFDEIVSILETYAECYNEDPDFFGHYVPSSRYTALQCLPKCITKQLSASLKPRNSSSS | 360 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
1 | 29367565 | 29369695 | - | CePI673135_01g014700.1 | Cec01g1470 | 194687 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec01g1470 | 360 | SUPERFAMILY | Protein kinase-like (PK-like) | 46 | 311 | IPR011009 | - | |
Cec01g1470 | 360 | CDD | STKc_MAP3K-like | 66 | 311 | - | - | |
Cec01g1470 | 360 | PANTHER | SERINE-THREONINE PROTEIN KINASE | 55 | 312 | IPR050167 | GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER) | |
Cec01g1470 | 360 | ProSiteProfiles | Protein kinase domain profile. | 57 | 315 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec01g1470 | 360 | Pfam | Protein tyrosine and serine/threonine kinase | 63 | 311 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec01g1470 | 360 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 179 | 191 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec01g1470 | 360 | Gene3D | Phosphorylase Kinase; domain 1 | 47 | 139 | - | - | |
Cec01g1470 | 360 | SMART | serkin_6 | 57 | 315 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec01g1470 | 360 | PRINTS | Tyrosine kinase catalytic domain signature | 173 | 191 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec01g1470 | 360 | PRINTS | Tyrosine kinase catalytic domain signature | 135 | 148 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec01g1470 | 360 | PRINTS | Tyrosine kinase catalytic domain signature | 282 | 304 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec01g1470 | 360 | PRINTS | Tyrosine kinase catalytic domain signature | 238 | 260 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec01g1470 | 360 | PRINTS | Tyrosine kinase catalytic domain signature | 219 | 229 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec01g1470 | 360 | FunFam | Serine/threonine-protein kinase isoform 1 | 47 | 139 | - | - | |
Cec01g1470 | 360 | Gene3D | Transferase(Phosphotransferase) domain 1 | 140 | 324 | - | - |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec01g1470 | Cec-Chr1:29367565 | Cec04g2011 | Cec-Chr4:38272286 | 2.40E-93 | dispersed | |
Cec02g0405 | Cec-Chr2:3820343 | Cec01g1470 | Cec-Chr1:29367565 | 3.00E-66 | transposed | |
Cec02g2035 | Cec-Chr2:38101670 | Cec01g1470 | Cec-Chr1:29367565 | 1.40E-31 | transposed | |
Cec04g1863 | Cec-Chr4:37211515 | Cec01g1470 | Cec-Chr1:29367565 | 2.60E-111 | transposed | |
Cec05g0566 | Cec-Chr5:4600154 | Cec01g1470 | Cec-Chr1:29367565 | 1.00E-17 | transposed | |
Cec05g1704 | Cec-Chr5:28327378 | Cec01g1470 | Cec-Chr1:29367565 | 1.30E-67 | transposed | |
Cec05g1735 | Cec-Chr5:28899987 | Cec01g1470 | Cec-Chr1:29367565 | 8.10E-35 | transposed | |
Cec10g0042 | Cec-Chr10:495079 | Cec01g1470 | Cec-Chr1:29367565 | 1.60E-67 | transposed | |
Cec11g1164 | Cec-Chr11:23849824 | Cec01g1470 | Cec-Chr1:29367565 | 2.30E-79 | transposed | |
Cec01g1470 | Cec-Chr1:29367565 | Cec10g1438 | Cec-Chr10:28745843 | 4.00E-56 | wgd |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71693 | PF07714 | PK_Tyr_Ser-Thr | 7.20E-66 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec01g1470 | - | - | - | 0.0 |