Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1491 ATGACTTTCCCTTTCCCTTTACTTTTCCTCATTACCATCACCATCTCCTTTTCCCTCCCCTTCCCCTCTCTTGTTCACTCCAAACTCACCCTTGGTTATTACCAAAAAACCTGTCCCGACTTCGAGAAGATCATTCGCGAAACTGTCACCAATAAACAAATCACCAGCCCTGTCACTGCCGCTGGAACCCTTCGCCTCTTCTTCCACGACTGCATGGTTGATGGTTGCGACGCCTCCATCCTCATTTCCTCCAACTCCTTCAACCAAGCCGAGCGTGAGGCTGAAATCAACCATTCCCTCTCTGGTGACGCCTTCGACGTCGTCGTTCATGCTAAGACCAACCTCGAACTTGCTTGCCCTGGCATTGTCTCTTGTTCCGACATCTTGGCACAGGCAACTCGAGATTTAGTGGTGATGGTGGGAGGGCCATTCTACAACGTTCGATTGGGGAGAAAAGATGGAATGTTATCAAAAGTAGAAAACGTGGAAGGAAACCTTCCAAAAGTGGACTTCTCAATAGACAAACTCATCGATTTCTTCACCCAAAGAGGCTTCACCATCCAAGAACTAGTCGCCCTCTCCGGAGGCCACACCATCGGCTTCTCCCACTGCAAGGAATTCTCCGACCGCCTCTTTAACTTCAACGCCATGTCACCCACCGACCCCGACATTTACCCCAAATTTGCTGAAAAGCTCAAGGCAATGTGTGCCAATTACCTCACAGACACTGCCATGTCAGCTTTCAATGACGTCATGACACCTGGCAAATTCGACAACATGTACTTCCAAAATCTTCCACGTGGCCTTGGCTTACTCGCTACTGACATCGCCCTTTATAAAGACCCTAGGACCAAGCCGTTTGTGGATCTTTACGCCGTTAATCAAACAGCATTTTTTAAGGACTTTGCTCATGCAATGGAGAAGCTTAGCGTTTACGGCGTTAAGACGGGAAGGAAAGGGGAGGTTCGACGAAGGTGTGACCTCTTTAATTCCATTCAGACATGA 1005 48.56 MTFPFPLLFLITITISFSLPFPSLVHSKLTLGYYQKTCPDFEKIIRETVTNKQITSPVTAAGTLRLFFHDCMVDGCDASILISSNSFNQAEREAEINHSLSGDAFDVVVHAKTNLELACPGIVSCSDILAQATRDLVVMVGGPFYNVRLGRKDGMLSKVENVEGNLPKVDFSIDKLIDFFTQRGFTIQELVALSGGHTIGFSHCKEFSDRLFNFNAMSPTDPDIYPKFAEKLKAMCANYLTDTAMSAFNDVMTPGKFDNMYFQNLPRGLGLLATDIALYKDPRTKPFVDLYAVNQTAFFKDFAHAMEKLSVYGVKTGRKGEVRRRCDLFNSIQT 334
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 29556387 29557624 + CePI673135_01g014910.1 Cec01g1491 194708
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1491 334 ProSitePatterns Peroxidases active site signature. 60 71 IPR019794 GO:0004601(InterPro)
Cec01g1491 334 CDD secretory_peroxidase 28 329 IPR033905 GO:0004601(InterPro)|GO:0042744(InterPro)
Cec01g1491 334 PRINTS Haem peroxidase superfamily signature 60 74 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 PRINTS Haem peroxidase superfamily signature 123 140 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 PRINTS Haem peroxidase superfamily signature 189 204 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 PRINTS Haem peroxidase superfamily signature 141 153 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 PRINTS Haem peroxidase superfamily signature 250 265 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 FunFam Peroxidase 32 177 - -
Cec01g1491 334 Pfam Peroxidase 46 293 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 Gene3D Peroxidase, domain 2 167 309 - -
Cec01g1491 334 Gene3D - 32 330 - -
Cec01g1491 334 ProSitePatterns Peroxidases proximal heme-ligand signature. 189 199 IPR019793 -
Cec01g1491 334 PANTHER - 16 330 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 PRINTS Plant peroxidase signature 62 82 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 PRINTS Plant peroxidase signature 141 156 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 PRINTS Plant peroxidase signature 188 200 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 PRINTS Plant peroxidase signature 248 263 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 PRINTS Plant peroxidase signature 304 317 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 PRINTS Plant peroxidase signature 38 57 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 PRINTS Plant peroxidase signature 264 281 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 PRINTS Plant peroxidase signature 122 132 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 PRINTS Plant peroxidase signature 103 116 IPR000823 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 SUPERFAMILY Heme-dependent peroxidases 29 330 IPR010255 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
Cec01g1491 334 FunFam Peroxidase 167 309 - -
Cec01g1491 334 ProSiteProfiles Plant heme peroxidase family profile. 28 330 IPR002016 GO:0004601(InterPro)|GO:0006979(InterPro)|GO:0020037(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1491 Cec-Chr1:29556387 Cec11g0735 Cec-Chr11:8320099 1.40E-76 dispersed
Cec03g0621 Cec-Chr3:6646797 Cec01g1491 Cec-Chr1:29556387 1.10E-71 transposed
Cec04g1434 Cec-Chr4:33950058 Cec01g1491 Cec-Chr1:29556387 1.40E-76 transposed
Cec05g1932 Cec-Chr5:31392897 Cec01g1491 Cec-Chr1:29556387 3.30E-70 transposed
Cec01g1491 Cec-Chr1:29556387 Cec10g1471 Cec-Chr10:29108422 7.60E-110 wgd
Cec01g1491 Cec-Chr1:29556387 Cec06g1870 Cec-Chr6:32040904 1.70E-122 wgd
Cec01g1491 Cec-Chr1:29556387 Cec09g1986 Cec-Chr9:36882419 7.80E-107 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1491 K00430 - csv:101220163 598.586