Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1590 ATGCAAACCCAGATGGGAACTCGTTTCATTTCTTTCTTTCTTTTGGGATTCTGTTTTCTACTTCCCACTGTGAAACCAGATCTTGCTTCTGATAGAACAGCTCTTTTGGCCCTTCGTTCTGCTGTGGGTGGCCGAACTCTTATGCTTTGGAATGTGACTGATCAGAACCCCTGTTCTTGGCCTGGGATTCAATGCGAGGACAATCGTGTCACTGTTCTTCGTCTTCCCGGAGCGGCGCTTTTCGGTCAATTACCGAATGGGATTTTTGGGAACTTGACTCACCTTCGTACACTCAGCCTTCGGCTCAATGCCCTTTCCGGTCAGCTCCCCTCAGATCTCTCTGCCTGCATTAATCTTCGCAACCTCTATTTGCAAGGTAATGAGTTTTCAGGCCTTGTCCCTGATTTCTTGTTTCAGCTTCGTGACCTTGTTCGTCTTAATTTGGCTTCCAATAACTTTTCTGGGGAGATCTCTTTCGGGTTCAACAATTTGACCCGTCTCAAAACTCTGTTCCTTGAGAAAAATCATCTCTCTGGGTCTATCCCGGACTTGAAGATCCCTCTGGATCAGTTCAACGTTTCTAACAATCAGTTAAATGGGTCGGTACCTAAGGGATTGCAGTCGTTTTCTTCGAGTTCCTTTTTGGGGAATTCTCTCTGTGGGCGTCCTCTTGAGTCTTGCTCTGGTGATCTTGTTGTGCCGACAGGGGAGGTTGGGAGCAATGGCGGCTCTGGACACAAGAAAAAGTTGTCAGGGGGAGCCATTGCTGGGATTGTTATTGGATCTGTACTGGGTTTTGTGTTGATACTTGTAATCTTAATGCTTTTGTGCCGAAAGAAGAGTTCTAAGAAAACGAGTTCAGTCGATGTAGCCACAGTGAAGCATCCTGAAGTGGAAATTCATGGCGGTAAGCCAGCTGAGGAGATTGAAAATGGGGGTTACAGTAATGGTTATGCTGTGCCAGCCACTGCTGCTACTGCTTCTGCTGCAACAGTGGCGGCCGGTACTGCAAAGGGGGAAGTGAATGCCAATGGTACTGGGACTAAAAAATTGGTGTTTTTTGGCAATGCTGCAAGGGTGTTTGATTTGGAGGATCTTTTGAGAGCTTCAGCTGAAGTGTTGGGGAAAGGAACCTTTGGGACTGCTTACAAAGCAGTTTTGGAAGTGGGTTCTGTTGTGGCTGTGAAGAGGTTGAAGGATGTTACTATAACAGATAGGGAATTCAGAGAGAAGATTGAAGCTGTTGGATCTATGGATCATGAAAATTTGGTCCCTCTCAGGGCTTACTATTTCAGTAGGGATGAGAAGCTTCTTGTCTATGATTACATGGCCATGGGAAGCTTATCTGCTCTTTTACATGGAAACAAAGGAGCTGGCAGGACTCCATTGAATTGGGAAATCAGATCTGGAATTGCGCTTGGAGCTGCTCGTGGCATTGAATATCTGCATTCTCAAGGCCCTAATGTTTCCCATGGAAACATAAAATCTTCCAATATTCTTCTAACAAAATCCTATGATTCTCGAGTCTCCGATTTCGGTTTAGCACATCTTGTTGGACCACCTTCCAGCCCCACCAGAGTTGCTGGTTACCGTGCACCAGAGGTCACCGATCCTCGTAAAGTATCCCACAAGGCTGATGTCTATAGCTTTGGCGTATTGCTTTTGGAGCTTTTGACAGGAAAGGCTCCTACTCACTCCCTTTTAAACGAGGAAGGAGTTGATCTACCCAGATGGGTGCAGTCAGTTGTGAGGGAGGAGTGGACTTCCGAAGTTTTTGACCTCGAGCTTCTTAGGTACCAAAACGTTGAGGAGGAGATGGTTCAGCTATTGCAGCTTGCAGTCGATTGTGCAGCTCAGTATCCTGATAAGCGTCCTACTATGTCCGAAGTCACAAAGCGTATAGAAGAGCTTCGCCAATCCAGCCTTCACGAAGCTGTCAATCCACAACCCGACGCTGCTCATGACTCAGACGATGTGTCTTCTAGGTGA 1989 46.61 MQTQMGTRFISFFLLGFCFLLPTVKPDLASDRTALLALRSAVGGRTLMLWNVTDQNPCSWPGIQCEDNRVTVLRLPGAALFGQLPNGIFGNLTHLRTLSLRLNALSGQLPSDLSACINLRNLYLQGNEFSGLVPDFLFQLRDLVRLNLASNNFSGEISFGFNNLTRLKTLFLEKNHLSGSIPDLKIPLDQFNVSNNQLNGSVPKGLQSFSSSSFLGNSLCGRPLESCSGDLVVPTGEVGSNGGSGHKKKLSGGAIAGIVIGSVLGFVLILVILMLLCRKKSSKKTSSVDVATVKHPEVEIHGGKPAEEIENGGYSNGYAVPATAATASAATVAAGTAKGEVNANGTGTKKLVFFGNAARVFDLEDLLRASAEVLGKGTFGTAYKAVLEVGSVVAVKRLKDVTITDREFREKIEAVGSMDHENLVPLRAYYFSRDEKLLVYDYMAMGSLSALLHGNKGAGRTPLNWEIRSGIALGAARGIEYLHSQGPNVSHGNIKSSNILLTKSYDSRVSDFGLAHLVGPPSSPTRVAGYRAPEVTDPRKVSHKADVYSFGVLLLELLTGKAPTHSLLNEEGVDLPRWVQSVVREEWTSEVFDLELLRYQNVEEEMVQLLQLAVDCAAQYPDKRPTMSEVTKRIEELRQSSLHEAVNPQPDAAHDSDDVSSR 662
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30557270 30559817 + CePI673135_01g015900.1 Cec01g1590 194807
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1590 662 FunFam Probable inactive receptor kinase RLK902 28 185 - -
Cec01g1590 662 FunFam pollen receptor-like kinase 1 337 442 - -
Cec01g1590 662 Pfam Protein kinase domain 372 632 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1590 662 Gene3D Transferase(Phosphotransferase) domain 1 443 658 - -
Cec01g1590 662 Gene3D Ribonuclease Inhibitor 187 230 IPR032675 -
Cec01g1590 662 SUPERFAMILY Protein kinase-like (PK-like) 372 642 IPR011009 -
Cec01g1590 662 Gene3D Phosphorylase Kinase; domain 1 335 442 - -
Cec01g1590 662 Pfam Leucine rich repeat N-terminal domain 29 65 IPR013210 -
Cec01g1590 662 PANTHER OS05G0588300 PROTEIN 11 653 IPR050994 -
Cec01g1590 662 ProSiteProfiles Protein kinase domain profile. 368 646 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1590 662 Pfam Leucine Rich Repeat 143 164 IPR001611 GO:0005515(InterPro)
Cec01g1590 662 Pfam Leucine Rich Repeat 118 140 IPR001611 GO:0005515(InterPro)
Cec01g1590 662 Gene3D Ribonuclease Inhibitor 28 186 IPR032675 -
Cec01g1590 662 MobiDBLite consensus disorder prediction 639 662 - -
Cec01g1590 662 CDD STKc_IRAK 374 637 - -
Cec01g1590 662 ProSitePatterns Protein kinases ATP-binding region signature. 374 396 IPR017441 GO:0005524(InterPro)
Cec01g1590 662 FunFam Probable inactive receptor kinase At1g48480 443 645 - -
Cec01g1590 662 SUPERFAMILY L domain-like 31 212 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1590 Cec-Chr1:30557270 Cec11g0278 Cec-Chr11:3025179 1.50E-130 dispersed
Cec01g0876 Cec-Chr1:10108936 Cec01g1590 Cec-Chr1:30557270 7.10E-125 transposed
Cec05g1305 Cec-Chr5:13138731 Cec01g1590 Cec-Chr1:30557270 5.50E-165 transposed
Cec09g2212 Cec-Chr9:39040173 Cec01g1590 Cec-Chr1:30557270 1.50E-53 transposed
Cec01g1590 Cec-Chr1:30557270 Cec06g1611 Cec-Chr6:29688440 6.00E-66 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71698 PF00069 Pkinase 5.00E-39 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1590 - - - 0.0