Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1612 ATGAAGAACCTCCTTAAGAAGTTCCACATCATGTCCAGTGGTCAGTCTGACGATGCAGCTGAAGGGTCTACTTCATCGAGGAGCAGTAAATTAATGGAGGTTTCTTCGCCTGATAAGCTGCCGTCTCGCTCCCGAACGACCCATTTCAATTCGGAGCATAAACCCTTCTCGGGGTTATCCGGTTGGTTGAACTCTGTTACAAATAGGCGTAGCCCCAGTCCTCCATCATCTTCCAATCCTACTGCAGGCGAGTTAATGGAGCCATCAGATTCAGTTTCTAGCAGAGATGCTGCAATGGATACATCTAGGCATGATTCAGGGTCGAGTAACTCGAGGGATCCTGATATAGAGGAAGAGTATCAGATACAGCTTGCTTTGGAACTGAGTGCTAGAGAGGATCCTGAGGCAGCTCAGATTGAGGCTGTGAAGCAGATTAGTTTGGGGTCATGTGATCCTGATAACACTCCAGCTGAAGTTATTGCCTTCAGATATTGGAATTACAATTCTCTTAGCTATGATGACAAGATCTTGGATGGCTTTTATGACCTATATGGAGTCTTCACTGAGCCCACCTCAGAAAGAATGCCTTCCCTAGTTGATCTGCAAGGAGCACCAATGTCTGACAGTGTCACTTGGGAAGCAGTTCTGATTAATAAAGCTGCTGATGCTAACTTGTTGAAACTTGAACAGACAGCATTGGAGATGGCTATCAAAATGGGGACGGAATCCCCAATTTCTGTAAATAGTTATTTGGTGCGGAAGCTTGCTGTTTTAGTTTCAGATCATATGGGGGGACCAGTAGGCGATCCTGAAAAGATGTTGAGAAAATGGAGAAATCTTAGTTACGGCTTGAAAGCAACCCTTGGCAGTATGGTTTTGCCTCTTGGCTCCCTTACTGTAGGGTTGGCCCGTCATCGTGCATTGTTATTCAAGCTTTTGGCGGATGGCGTGGGTATTCCTTGTAGGTTGGTGAAGGGACCACAGTACACAGGTTCTGATGATGTGGCGATGAACTTCATAAAGATTGATGATGGAAGGGAGTACATTGTGGATTTAATGGCAGATCCTGGTGCACTTATTCCAGCTGATGTTACTGGATCGCATGTAGAGTATGATGGATCCCCTTTTTCAGCCAGTCCACTTTCTAGAGATGTTGATTCTTCTCAGGCAGCATCTTCAAGCAGTGGGGTTGGCAGTTCACTAGAGGGAAATTCAGATTTTGGGATATCAGATAGGAAACCAAAGTTTCGGAATCTCAGTGCCACAAAGGAATATGATTCTCCCAATGTCGACAAGGGGCCATCACGTGATTTTGCTAGCAAATCAAATTATCCTGGCATGCATGTTAGATCACCTTCTTGGACTGAGGGTGTTAGTTCACCTGCAGTGCGCAGAATGAAAGTAAAGGATGTTTCACAATACATGATTGATGCTGCCAAAGAGAATCCACGGTTGGCTCAAAAGCTTCATGACGTGTTACTTGAAAGTGGTGTGGTTGCTCCCCCTAACTTGTTTACTGAGGCATACCCTGACCAAATAGATGTTATTGTTGAGTCTAAGTCACCAACGGAAGACAAGGATCAAAGTAGAAAGGTGCCTGGTCTCTGTGAAAGTGTAGATAAGAATGATCCTCGTCCAGCTAACTTTTTGCCTCCCTTGCCTCAGCCCAGAATGCATTCTAGAGCCAGCCCTACCCATGGCCAACAACTGCACCTTAAACCTCTGGAATTTAACCTTTCTCTCGATTCAAGAGAAGCAGCCGGACAACCTATAGCCTTACCTTTTGAGGTAACACCAGTGAAGTATGGGAGAAATGTACCTGTTGCTGCAGCAGCAGCAGCTGCCGCAGCTGTTGTTGCATCATCAATGGTGGTAGCTGCAGCAAAGAGTACCGATGCAAATCTTGAAATTCCTGTAGCAGCTGCTGCCACCGCCACTGCTGCTGCAGTGGTTGCAACAACTGCAGCAGTCAACAAGCAATATGAGCAGGTTGAGGCCGATGCTACTCTTTATGAGCAGCGTGGAAGTGGAGATAGGGAGCATGATGCTTGTGGAGAAAATTCAGAGGGTGAACGAATATCAGATAGATCAGTTGGTAACGAAAGCACAAAATCCGATATTACCCTTGATGATGTTGCAGAATGCGAGATCCCATGGGAAGAAATCTCCTTGGGAGAGCGTATTGGACTTGGATCATATGGGGAGGTCTATCGTGGAGATTGGCATGGAACTGAGGTAGCTGTGAAGAGGTTTCTAGACCAGGACATTTCTGGCGAATCTCTTGAAGAATTCAAAAGTGAGGTTCGAATTATGAAAAGGCTTCGGCATCCGAATGTTGTTCTCTTCATGGGAGCTGTGACACGTGCTCCCCACCTTTCAATTGTTACAGAATTTCTTCCCAGAGGTAGCTTGTACAGGTTAATTCACCGTCCCAACAATCAATTAGATGAACGAAAGCGATTGAGGATGGCTCTTGATGCAGCTCGGGGAATGAATTATTTGCACAATTGCACGCCTGTTGTTGTACATCGTGATTTGAAGTCCCCAAATCTACTTGTTGATAAAAATTGGGTTGTGAAGGTATGTGATTTTGGTTTATCTAAAATGAAGCATAGCACATTTCTTTCTTCAAGGTCAACAGCTGGAACCGCTGAGTGGATGGCTCCAGAAGTGCTGAGAAATGAACCTTCAGATGAAAAGTGTGACGTTTATAGTTATGGAGTCATACTATGGGAGCTGTCTACAATGCAACAACCATGGGGAGGAATGAACCCAATGCAAGTTGTTGGTGCTGTTGGCTTTCAGCATCGCCGTCTTGACATCCCAGACAATTTAGATCCTGCCATTGCCGACATTATTAGGAAATGCTGGCAAACAGATCCAAGATTAAGACCTTCATTTGCTGAGATTATGGCTGCGCTAAAGCCGCTGCAGAAGCCAATGTCAAGTTCTCAAGTACCGAGACCAAATGCTCCTGCAGGTAGTAGTCGTGACAAGGCTCGATTATTGCAAGTTGCTGAAGACCCATCAGGCTAG 3036 45.49 MKNLLKKFHIMSSGQSDDAAEGSTSSRSSKLMEVSSPDKLPSRSRTTHFNSEHKPFSGLSGWLNSVTNRRSPSPPSSSNPTAGELMEPSDSVSSRDAAMDTSRHDSGSSNSRDPDIEEEYQIQLALELSAREDPEAAQIEAVKQISLGSCDPDNTPAEVIAFRYWNYNSLSYDDKILDGFYDLYGVFTEPTSERMPSLVDLQGAPMSDSVTWEAVLINKAADANLLKLEQTALEMAIKMGTESPISVNSYLVRKLAVLVSDHMGGPVGDPEKMLRKWRNLSYGLKATLGSMVLPLGSLTVGLARHRALLFKLLADGVGIPCRLVKGPQYTGSDDVAMNFIKIDDGREYIVDLMADPGALIPADVTGSHVEYDGSPFSASPLSRDVDSSQAASSSSGVGSSLEGNSDFGISDRKPKFRNLSATKEYDSPNVDKGPSRDFASKSNYPGMHVRSPSWTEGVSSPAVRRMKVKDVSQYMIDAAKENPRLAQKLHDVLLESGVVAPPNLFTEAYPDQIDVIVESKSPTEDKDQSRKVPGLCESVDKNDPRPANFLPPLPQPRMHSRASPTHGQQLHLKPLEFNLSLDSREAAGQPIALPFEVTPVKYGRNVPVAAAAAAAAAVVASSMVVAAAKSTDANLEIPVAAAATATAAAVVATTAAVNKQYEQVEADATLYEQRGSGDREHDACGENSEGERISDRSVGNESTKSDITLDDVAECEIPWEEISLGERIGLGSYGEVYRGDWHGTEVAVKRFLDQDISGESLEEFKSEVRIMKRLRHPNVVLFMGAVTRAPHLSIVTEFLPRGSLYRLIHRPNNQLDERKRLRMALDAARGMNYLHNCTPVVVHRDLKSPNLLVDKNWVVKVCDFGLSKMKHSTFLSSRSTAGTAEWMAPEVLRNEPSDEKCDVYSYGVILWELSTMQQPWGGMNPMQVVGAVGFQHRRLDIPDNLDPAIADIIRKCWQTDPRLRPSFAEIMAALKPLQKPMSSSQVPRPNAPAGSSRDKARLLQVAEDPSG 1011
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30762998 30775806 - CePI673135_01g016120.1 Cec01g1612 194829
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1612 1011 MobiDBLite consensus disorder prediction 672 699 - -
Cec01g1612 1011 ProSitePatterns Serine/Threonine protein kinases active-site signature. 841 853 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1612 1011 SUPERFAMILY Protein kinase-like (PK-like) 703 972 IPR011009 -
Cec01g1612 1011 FunFam Serine/threonine-protein kinase isoform 1 713 800 - -
Cec01g1612 1011 SMART serkin_6 722 977 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1612 1011 MobiDBLite consensus disorder prediction 520 568 - -
Cec01g1612 1011 Pfam Ethylene-responsive protein kinase Le-CTR1 157 360 - -
Cec01g1612 1011 MobiDBLite consensus disorder prediction 520 538 - -
Cec01g1612 1011 ProSiteProfiles Protein kinase domain profile. 722 978 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1612 1011 PRINTS Tyrosine kinase catalytic domain signature 945 967 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1612 1011 PRINTS Tyrosine kinase catalytic domain signature 796 809 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1612 1011 PRINTS Tyrosine kinase catalytic domain signature 882 892 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1612 1011 PRINTS Tyrosine kinase catalytic domain signature 901 923 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1612 1011 PRINTS Tyrosine kinase catalytic domain signature 835 853 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1612 1011 MobiDBLite consensus disorder prediction 1 116 - -
Cec01g1612 1011 MobiDBLite consensus disorder prediction 16 44 - -
Cec01g1612 1011 Pfam Protein tyrosine and serine/threonine kinase 723 974 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1612 1011 FunFam Serine/threonine-protein kinase CTR1 801 984 - -
Cec01g1612 1011 MobiDBLite consensus disorder prediction 978 1011 - -
Cec01g1612 1011 MobiDBLite consensus disorder prediction 380 406 - -
Cec01g1612 1011 MobiDBLite consensus disorder prediction 672 705 - -
Cec01g1612 1011 MobiDBLite consensus disorder prediction 97 116 - -
Cec01g1612 1011 MobiDBLite consensus disorder prediction 378 459 - -
Cec01g1612 1011 CDD STKc_MAP3K-like 728 974 - -
Cec01g1612 1011 MobiDBLite consensus disorder prediction 51 88 - -
Cec01g1612 1011 Gene3D Phosphorylase Kinase; domain 1 715 799 - -
Cec01g1612 1011 ProSitePatterns Protein kinases ATP-binding region signature. 728 749 IPR017441 GO:0005524(InterPro)
Cec01g1612 1011 PANTHER SERINE-THREONINE PROTEIN KINASE 68 975 IPR050167 GO:0004672(PANTHER)|GO:0005737(PANTHER)|GO:0007165(PANTHER)
Cec01g1612 1011 Gene3D Transferase(Phosphotransferase) domain 1 801 986 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1612 Cec-Chr1:30762998 Cec11g1517 Cec-Chr11:29376439 3.80E-120 dispersed
Cec02g1864 Cec-Chr2:36440390 Cec01g1612 Cec-Chr1:30762998 8.50E-07 transposed
Cec02g1958 Cec-Chr2:37450203 Cec01g1612 Cec-Chr1:30762998 1.50E-46 transposed
Cec03g0407 Cec-Chr3:4480154 Cec01g1612 Cec-Chr1:30762998 6.80E-48 transposed
Cec03g1693 Cec-Chr3:35160291 Cec01g1612 Cec-Chr1:30762998 9.10E-170 transposed
Cec05g1963 Cec-Chr5:31680992 Cec01g1612 Cec-Chr1:30762998 9.70E-190 transposed
Cec06g0456 Cec-Chr6:5147762 Cec01g1612 Cec-Chr1:30762998 9.00E-93 transposed
Cec11g1300 Cec-Chr11:27014399 Cec01g1612 Cec-Chr1:30762998 1.30E-48 transposed
Cec01g1612 Cec-Chr1:30762998 Cec10g1954 Cec-Chr10:34337981 2.90E-120 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71699 PF07714 PK_Tyr_Ser-Thr 5.40E-67 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1612 - - - 0.0