Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1613 ATGATTGGCCTTCTGAAGAAGCGGAGGTTGGTTGCAAAAGGAAGAAGTGTTGGAAAATGGCGGGTTGAAGATGGAGAACGGAAAATGCTGCAATTTAATGGCGGAGAACTGAATCAGAACCGAGGAAGGCGACCGCTGGTTTTATACGGTTTGATACATATTGTAATCGAATTGACGTTAATCTGCTCTACCATGGATCGCCTCAATAAGGGTGATAAGCAATCAGAATTTTTCACAGAGTATGGAGAAGCAAGCCGATACCAAATTCAAGAAGTTGTTGGGAAAGGAAGCTATGGAGTTGTTGGTTCTGCAATTGATACCCAGACTGGTGAAAGAGTTGCCATCAAGAAAATTAATGATGTGTTTGAGCATGTATCTGATGCCATTCGTATCCTCAGAGAAATTAAGCTTCTTCGGATGCTTCATCATCCGAATATTGTAGAGATAAAACATATTATGCTTCCTCCCTCACAACGAGAATTCAAAGATATATATCTTGTTTTTGAGTTGATGAAGTCTGATCTTCACCATGTAATTAGGGCAAATAATGATCTTTCTCCCAAGCAGCATAAGTTTTTTCTCTACCAGCTTCTTAGTGGCCTAAAATATATTCATGCGGCAAATGTCCTTCATCGAGATTTGAAGCCGAAAAACATACTTGCTAATGCTGACTGCAGACTGAAGATATGTGATTTTGGACTTGCTCGTGTATCTTTTAGTGATGCGCCATCTACTATTTTTTGGACAGATTATGTTGCAACTCGATGGTATCGTGCTCCCGAACTCTGTGGATCATTTTTCTCGAGATATACCCCTGCGATAGATATATGGAGTATCGGATGCATATTTGCAGAAATGCTTACGGGGAAACCTTTGTTTCCTGGAAAAAATGTGGTTCACCAATTAGATCTAATTACCGATCTGTTTGGCACTCCTGAACCTGAGGCCATAGCGAAGATTCGGAATGAGAAGGCAAGAAGGTACCTTGGAAACATGCGTAAAAAACCACCAGTTCCATTCTCACGAAAGTTTCCTAATGTTGACCCATTAGCACTTTGTTTACTGGAACGTCTCCTGGCATTTGATCCCAAATGTCGTCTCACAGCTGCAGAGGCACTTGCTGATCCTTACTTCAACGGTATGGCGAAACCAGAACTTGAGCCTTCTATTCAACCAATTTCGAAACTTGAGTTTGAGTTTGAGAGGAGGAGGTTATCAAAAGATGATGTTAGAGAGTTGATTTATGCGGAGATTTTAGAGTATCATCCCCAGATGCGTCAGGAGTGTCTACGTGATGGAGATCATCAATCTACCTTTATGTATCCAAGTGGCGTTGATCGATTTAAGCTTCAGTTTGCACATCTGGAAGAGCACCATGGTATAGGGGAAAGAAGAAGTCCACTTCAAAGGCAGAACATTTCTTTACCACGGGAGCGGGTTAGTCCTACTGAGCAGAACAACACTGAGAATAAAACTGATTTTGAAAGGGGGAAAGATAAGAGTTCTTATCTCTTGAAAAGTGCTAGTATTAGTGCATCGAGGTGTGTTGGGGTAACACCAAAGGAGAAGTCTGAGGCGGAAGAAACGAGTACTGAAGTGAAAAATGAAGCAGTGGATGGCTTGTCTCAGAAGATCGCAGTCCTTCAGACTTGA 1653 41.68 MIGLLKKRRLVAKGRSVGKWRVEDGERKMLQFNGGELNQNRGRRPLVLYGLIHIVIELTLICSTMDRLNKGDKQSEFFTEYGEASRYQIQEVVGKGSYGVVGSAIDTQTGERVAIKKINDVFEHVSDAIRILREIKLLRMLHHPNIVEIKHIMLPPSQREFKDIYLVFELMKSDLHHVIRANNDLSPKQHKFFLYQLLSGLKYIHAANVLHRDLKPKNILANADCRLKICDFGLARVSFSDAPSTIFWTDYVATRWYRAPELCGSFFSRYTPAIDIWSIGCIFAEMLTGKPLFPGKNVVHQLDLITDLFGTPEPEAIAKIRNEKARRYLGNMRKKPPVPFSRKFPNVDPLALCLLERLLAFDPKCRLTAAEALADPYFNGMAKPELEPSIQPISKLEFEFERRRLSKDDVRELIYAEILEYHPQMRQECLRDGDHQSTFMYPSGVDRFKLQFAHLEEHHGIGERRSPLQRQNISLPRERVSPTEQNNTENKTDFERGKDKSSYLLKSASISASRCVGVTPKEKSEAEETSTEVKNEAVDGLSQKIAVLQT 550
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30787732 30792665 + CePI673135_01g016130.1 Cec01g1613 194830
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1613 550 Pfam Protein kinase domain 87 378 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1613 550 MobiDBLite consensus disorder prediction 460 498 - -
Cec01g1613 550 ProSiteProfiles Protein kinase domain profile. 87 378 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1613 550 ProSitePatterns MAP kinase signature. 122 225 IPR003527 GO:0004707(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1613 550 MobiDBLite consensus disorder prediction 515 535 - -
Cec01g1613 550 ProSitePatterns Protein kinases ATP-binding region signature. 93 117 IPR017441 GO:0005524(InterPro)
Cec01g1613 550 SMART serkin_6 87 378 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1613 550 FunFam Mitogen-activated protein kinase 75 180 - -
Cec01g1613 550 CDD STKc_TDY_MAPK 86 423 - -
Cec01g1613 550 MobiDBLite consensus disorder prediction 467 488 - -
Cec01g1613 550 FunFam Mitogen-activated protein kinase 173 401 - -
Cec01g1613 550 MobiDBLite consensus disorder prediction 520 534 - -
Cec01g1613 550 SUPERFAMILY Protein kinase-like (PK-like) 83 385 IPR011009 -
Cec01g1613 550 PANTHER MITOGEN-ACTIVATED PROTEIN KINASE 84 419 IPR050117 GO:0004674(PANTHER)|GO:0004707(PANTHER)|GO:0005634(PANTHER)|GO:0005737(PANTHER)|GO:0035556(PANTHER)
Cec01g1613 550 Gene3D Phosphorylase Kinase; domain 1 103 424 - -
Cec01g1613 550 Gene3D Transferase(Phosphotransferase) domain 1 173 401 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1613 Cec-Chr1:30787732 Cec03g0980 Cec-Chr3:17152601 6.30E-186 dispersed
Cec01g1613 Cec-Chr1:30787732 Cec10g2152 Cec-Chr10:36026976 1.70E-21 wgd
Cec01g1613 Cec-Chr1:30787732 Cec06g1641 Cec-Chr6:30022023 1.30E-207 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71700 PF00069 Pkinase 2.10E-67 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1613 - - - 0.0