Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1634 ATGAAAACTTCCGTCCCTCTCTTCCTCTTCTCTTTCTTCTTCACAATCCTGTTGTTTGATCTTCCGCTCTGTTTCGGCGATGTCGCCAGCGAGGAATTTAAAGCTTGCGGCGTCAGTTACAACTGCGGAGATTTGGTTAACATCTCATATCCATTTTGGGGGAATGAGCGGCAGGAGTTTTGCGGTCGGCGAGAATTCAAGCTCAATTGCAAAGACAACAAAACCACCACGATTCAAATGAATTCTATGGTATTTAATGTTCTAAACATCAGCCAATGGAATCATAGAATGACGATCGCAAGATCAGACTTGTTCGATGATTACTGCCCTAACAATCAAATCGAAGCGGCGACGTTGGATTATAGTCTATTCACGTATTCTTCAAATGATCTGAATCTGTCTGTGTGGTACGATTGTCCGGCGCTACACGGAATTCCGCGGGATTTCACATTTGAGTGCGGATCAGAAGGGGAAAAAAGAGGGAGAGCGAATTATGCTTTAGAAGAGAGGGCGATGAATTGGAGTTCATATATGGGAGATTGTAGAATGAAAATCGAAGTGACGATTATGATAGATGTATTGAAAGAAGGGGAAATGAACAGAACAATGGTTGTGGAAAGGGGAGTGAAAGAAGGGTTTGAAGTGGAATACGGTGATTATCATACGTTAGCGTGTGAGGGATGCAAGGAATACGGCGGCGCGTGTGGTGGAAACGCGACTCAAGAGTTTCGGTGCATCTGTGGAAATGGTGATGTTCATCTTTACGTTTGCCCACTTCCTCCTGCTGGAGAAAAGAGTATATGGGTGAAGGCCGTCATAGGTGTTTGCTCTGGTATTGGAGGTGTACTGATAATGAGTGTAGCCTTTTTCATCTGGTTTTGTTTGCACAAAAAGAAGCTAGCTCGTTCTTATACTCCCTCCTCCTTTCTCCTACGAACCAGTTCTTGTGATCCTCCAGCGAAGGAACTTGAGAAAGGAGAAAATGACATGGGGCTACCATTGTTCTCTTATGAAGAGCTTGAAAAAGCAACAGACAGATTTAATCCAGCCAAAGAACTTGGAGATGGTGGCTTTGGCACCGTCTACTATGGCAAACTTCCAGATGGGCGTGAGGTTGCAGTGAAAAGATTGTTTGAAAATAACTACCGACGAGTTGAGCATTTCATGAATGAAGTTGAGGTCCTTACTCGTTTGCGCCACCCACATCTAGTCACCCTTTATGGATGCACCTCTCGCCGCTGTCGTGAACTCTTGCTGGTTTATGAATTCATTCCGAATGGTACTGTCGCTGATCATCTTCATGGCAGCCGAGCAAAACCTGGTGAGCTTCCATGGCATACAAGGTTGAAGATTGCCATAGACACAGCAAGTGCTCTGGCTTTTCTTCATGCTTCTGAGACCATCCACCGTGACATTAAAACCACCAACATTCTCCTTGACAACAACTACAATGTTAAAGTTGCTGATTTCGGACTATCTCGCCTTTTTCCTACACAAGCAACCCATGTTTCAACTGCTCCACAAGGAACTCCTGGTTACGTAGATCCGGAGTATCACGAATGTTATCAACTTACAAATAAAAGCGACGTCTTTAGCTTTGGAGTAGTATTGGTTGAGCTGATATCTTCAAAGCCTGCAGTTGATATCACTAGGCACAGACATGAGATTAACTTGTGGACAATGGCAATCAACAAGATTCGAAATGACGAATTACATGACTTTGTAGATGCATCTCTTGGATTTGAAACAGATGAAACAGTAAGAGATATGATATGTGCAGTTGCAGAGTTGGCATTTCGATGCTTGCAAAGTGTGAAGGACACAAGGCCGTCAATGTTGGAGGCCCTGGAAATTCTTAAGAACATAGAGACTCGAGGCAAAGGAAAAGGAGACAGACACATTTCAGGAGAAGACGATGTGCTGCTGAAGGATGGTTTAGTGCCAGAGTCTCCAGATTCTGTTGTCGTGCCTTGGATGAGCAAATCTTCGACGCCAAATGACAGTGGCTAA 2010 44.13 MKTSVPLFLFSFFFTILLFDLPLCFGDVASEEFKACGVSYNCGDLVNISYPFWGNERQEFCGRREFKLNCKDNKTTTIQMNSMVFNVLNISQWNHRMTIARSDLFDDYCPNNQIEAATLDYSLFTYSSNDLNLSVWYDCPALHGIPRDFTFECGSEGEKRGRANYALEERAMNWSSYMGDCRMKIEVTIMIDVLKEGEMNRTMVVERGVKEGFEVEYGDYHTLACEGCKEYGGACGGNATQEFRCICGNGDVHLYVCPLPPAGEKSIWVKAVIGVCSGIGGVLIMSVAFFIWFCLHKKKLARSYTPSSFLLRTSSCDPPAKELEKGENDMGLPLFSYEELEKATDRFNPAKELGDGGFGTVYYGKLPDGREVAVKRLFENNYRRVEHFMNEVEVLTRLRHPHLVTLYGCTSRRCRELLLVYEFIPNGTVADHLHGSRAKPGELPWHTRLKIAIDTASALAFLHASETIHRDIKTTNILLDNNYNVKVADFGLSRLFPTQATHVSTAPQGTPGYVDPEYHECYQLTNKSDVFSFGVVLVELISSKPAVDITRHRHEINLWTMAINKIRNDELHDFVDASLGFETDETVRDMICAVAELAFRCLQSVKDTRPSMLEALEILKNIETRGKGKGDRHISGEDDVLLKDGLVPESPDSVVVPWMSKSSTPNDSG 669
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30964839 30971970 + CePI673135_01g016340.1 Cec01g1634 194851
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1634 669 Pfam Wall-associated receptor kinase C-terminal 164 249 IPR032872 -
Cec01g1634 669 ProSiteProfiles Protein kinase domain profile. 347 622 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1634 669 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 15 664 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Cec01g1634 669 ProSitePatterns Protein kinases ATP-binding region signature. 353 375 IPR017441 GO:0005524(InterPro)
Cec01g1634 669 SUPERFAMILY Protein kinase-like (PK-like) 330 621 IPR011009 -
Cec01g1634 669 Pfam Wall-associated receptor kinase galacturonan-binding 41 101 IPR025287 GO:0030247(InterPro)
Cec01g1634 669 FunFam Wall-associated receptor kinase-like 20 424 631 - -
Cec01g1634 669 MobiDBLite consensus disorder prediction 645 669 - -
Cec01g1634 669 Pfam Protein tyrosine and serine/threonine kinase 350 616 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1634 669 Gene3D Phosphorylase Kinase; domain 1 320 423 - -
Cec01g1634 669 Gene3D Transferase(Phosphotransferase) domain 1 424 631 - -
Cec01g1634 669 SMART serkin_6 347 618 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1634 Cec-Chr1:30964839 Cec01g1639 Cec-Chr1:30993924 8.60E-246 dispersed
Cec01g1634 Cec-Chr1:30964839 Cec01g1635 Cec-Chr1:30973326 5.70E-149 tandem
Cec07g1597 Cec-Chr7:31504766 Cec01g1634 Cec-Chr1:30964839 1.30E-21 transposed
Cec11g1395 Cec-Chr11:28178774 Cec01g1634 Cec-Chr1:30964839 9.00E-42 transposed
Cec01g1634 Cec-Chr1:30964839 Cec05g2475 Cec-Chr5:35834800 2.30E-129 wgd
Cec01g1634 Cec-Chr1:30964839 Cec06g1668 Cec-Chr6:30272827 2.60E-154 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71702 PF07714 PK_Tyr_Ser-Thr 2.20E-45 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1634 - - - 0.0