Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1638 ATGATAAGGAGATATTCCACGCACACACCAAAGCGGTATAGTTACTCACAGCTAAAGAAAATCACAAATTCCTTCACAAACAAGCTTGGCCAAGGAGGATTTAGCACCGTCTACAAAGGAAAATTACGAGATGGTTGCGACGTGGCAGTGAAACTCTTGAATGAATCAAAAGAAAACGGCGAAGAGTTTATGAATGAAGTTGTTAGCATCACCAAAACATCGCATGTAAACGTAGCCACCCTCTTGGGATTTTGCTATGAACGAAGTACAAGGGCTTTAGTTTATGAATATATGTCTAATGGGTCATTGGGCAAGTATATATTTCAAAGAGGGCTACAGATCAAAAATGGTGTGGAGTTGAGTTTGAGCACACTCTATGGCATTGTTATTGGTGTGGCTCGAGGCTTAGAGTATTTGCATTGCCACTGCAACACAAAGATCTTGCATTTTGACATCAAACCAGACAACATTCTTTTGGACAATAATTTCTGCCCCAAGATCTCAGACTTTGGACTTGCAAAGCAATGCATGGCCAGAGAGAGTCAAGTGTCAATGACAGGTATGAAAGGGACGGTAGGATTCATGGCACCTGAAGTAATATTTAGAAATCTTGGCAAAGTTTCCCACAAGTCTGATGTTTATAGTTATGGAATGTTGGTTCTTGAGATGTTGGGTGAAAAGAAGTGTCCCAATGAAAGAGTGGGGCAGAGCAGTGAAGGGTACTTTCCTGATTGGATATATAACAATCTTACACGACATGAAATAGATGAAGGTTCTAATTGCTGGGGCAACACAGAAGAGGAAAAACAAATGGCAAGAAAAATGATAATTGTGGGGTTGCATTGCATTCAGACTTCCCCCCATCACAGGCCGTCGATGACCCATGTGGTTGCAATGTTAGAAGGCAGTATTGATGGCTTACAAATTCCACCAAAATCCAACTTGTATGGACCTCCTGCGACTGATCTACTCCAAGCTACTGCTTCTTCTTCTTCATCCAACTCGCCTGAGGCCACCCGTGTTGCAACTGCTCCTCAAGGAACTCCTGGCTATGTTGATGCGAAGAAGAGTTATTCTGATGTCTTGAAGATAGGTTTCAGTTTAAATTGGAGTGCCCAAAACTGTAGCAACTGTGAGACAAGAACAATATCTTCGGCCGGCTTCATTTTAATAATCTCCATTATCATCTTCATCTATTCCAAGAGAATAAGAATCTCAAACAAAGACAAAATCGAGGAAATTATTAAGAGATATTCCACACAGACACCCAAGCGATACAGTTACTCCAAGTTAAAGAAGATCACAGACTCTTTCAAGAACAAACTTGGCCAAGGAGGATTTAGCATTGTGTACAAAGGAAAGCTACCAAGTGGATGTGATGTGGCTGTGAAACTTTTAAATGAATCCAGACAAGAACATGGCCAAGATTTCATCAATGAAGTTGTTAGCATAGCCAAAACTTCGCACGTAAACATAGTCACCCTCATAGGTTTCTGCTACGAGCAGAACAAGAGGGCTTTGGTTTATGAATATATGCCTAAGGGGTCATTGGATAAGTACATATCCCACAACAGACTGCAAGAAAATGATATGAAATTGGATTGGAACACACTCTACAATGTTGTTATTGGTGTGGCACGAGGCTTAGAGTACTTACATCGCGGTTGCATCACAAGGATTTTGCACTTTGACATCAAACCACACAGCATACTTTTGGATGATGACTTCTGCCCCAAAATCTCAGATTTTGGGCTGCCCAAGCAATGCAGGCCCAAAGAAACTCATGTATCGATGACAGGTGTGAAAGGGACGGTAGGATTCATTGCACCCGAAGTAATATTCAGGAACTTTGGTAAGGTTTCTCACAAGTCTGATGTTTATAGCTATGGAATGTTGGTTCTTGAAATGTTGGGAGCAAGAAAGAACCCCAATTCCAATGACAGTGATGGAGTGGAGCAGGGCAGTGAAGCAGGGCAACCATTGCCCGACGACAGGCCGTCGATGACCGATGTGGTTGCAATGTTGGAAAGCAGTGTTGATGGCTTACAGATTCCACCAAAACCCAACTTGTTTGGACCTCCTACGACTGATCTCCTCCAAGCTGCTGCTTCTTCTTCATCAAACTCATACTAA 2133 42.15 MIRRYSTHTPKRYSYSQLKKITNSFTNKLGQGGFSTVYKGKLRDGCDVAVKLLNESKENGEEFMNEVVSITKTSHVNVATLLGFCYERSTRALVYEYMSNGSLGKYIFQRGLQIKNGVELSLSTLYGIVIGVARGLEYLHCHCNTKILHFDIKPDNILLDNNFCPKISDFGLAKQCMARESQVSMTGMKGTVGFMAPEVIFRNLGKVSHKSDVYSYGMLVLEMLGEKKCPNERVGQSSEGYFPDWIYNNLTRHEIDEGSNCWGNTEEEKQMARKMIIVGLHCIQTSPHHRPSMTHVVAMLEGSIDGLQIPPKSNLYGPPATDLLQATASSSSSNSPEATRVATAPQGTPGYVDAKKSYSDVLKIGFSLNWSAQNCSNCETRTISSAGFILIISIIIFIYSKRIRISNKDKIEEIIKRYSTQTPKRYSYSKLKKITDSFKNKLGQGGFSIVYKGKLPSGCDVAVKLLNESRQEHGQDFINEVVSIAKTSHVNIVTLIGFCYEQNKRALVYEYMPKGSLDKYISHNRLQENDMKLDWNTLYNVVIGVARGLEYLHRGCITRILHFDIKPHSILLDDDFCPKISDFGLPKQCRPKETHVSMTGVKGTVGFIAPEVIFRNFGKVSHKSDVYSYGMLVLEMLGARKNPNSNDSDGVEQGSEAGQPLPDDRPSMTDVVAMLESSVDGLQIPPKPNLFGPPTTDLLQAAASSSSNSY 710
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30987515 30993066 + CePI673135_01g016380.1 Cec01g1638 194855
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1638 710 SUPERFAMILY Protein kinase-like (PK-like) 7 301 IPR011009 -
Cec01g1638 710 Gene3D Phosphorylase Kinase; domain 1 408 511 - -
Cec01g1638 710 Gene3D Phosphorylase Kinase; domain 1 2 97 - -
Cec01g1638 710 Gene3D Transferase(Phosphotransferase) domain 1 98 308 - -
Cec01g1638 710 Gene3D Transferase(Phosphotransferase) domain 1 512 683 - -
Cec01g1638 710 MobiDBLite consensus disorder prediction 643 710 - -
Cec01g1638 710 ProSitePatterns Serine/Threonine protein kinases active-site signature. 147 159 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1638 710 PANTHER RUST RESISTANCE KINASE LR10-RELATED 5 319 IPR045874 GO:0004672(InterPro)
Cec01g1638 710 MobiDBLite consensus disorder prediction 326 346 - -
Cec01g1638 710 SMART serkin_6 436 687 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1638 710 SMART serkin_6 23 300 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1638 710 ProSitePatterns Protein kinases ATP-binding region signature. 29 51 IPR017441 GO:0005524(InterPro)
Cec01g1638 710 FunFam serine/threonine-protein kinase PBS1-like 2 97 - -
Cec01g1638 710 Pfam Protein tyrosine and serine/threonine kinase 25 299 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1638 710 FunFam Os07g0541700 protein 512 604 - -
Cec01g1638 710 MobiDBLite consensus disorder prediction 326 342 - -
Cec01g1638 710 Pfam Protein kinase domain 439 645 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1638 710 FunFam PR5-like receptor kinase 98 312 - -
Cec01g1638 710 ProSiteProfiles Protein kinase domain profile. 436 710 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1638 710 SUPERFAMILY Protein kinase-like (PK-like) 424 696 IPR011009 -
Cec01g1638 710 FunFam serine/threonine-protein kinase PBS1-like 404 511 - -
Cec01g1638 710 ProSitePatterns Protein kinases ATP-binding region signature. 442 464 IPR017441 GO:0005524(InterPro)
Cec01g1638 710 ProSiteProfiles Protein kinase domain profile. 23 304 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1635 Cec-Chr1:30973326 Cec01g1638 Cec-Chr1:30987515 1.40E-168 dispersed
Cec01g1638 Cec-Chr1:30987515 Cec05g1927 Cec-Chr5:31324232 3.10E-60 dispersed
Cec01g1636 Cec-Chr1:30980108 Cec01g1638 Cec-Chr1:30987515 2.80E-145 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71705 PF07714 PK_Tyr_Ser-Thr 1.50E-48 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1638 - - - 0.0