Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1639 ATGAAAATCTACCTAAAACCCAGAAAAAGTACCTTCTTCTTCTTCTTCATCGCGTTTCATCTTTCGCCATGTTTCAGCGAAGAACCTCTCCGTGAATTCAAAGATTGTGGTGTGAGTTATAATTGCGGCGAATTGGTAAACATCACGTATCCTTTTTGGGGGAATAAGAGGCAGAGTTTTTGCGGACGGAAAGAATTCAAACTCAACTGCAAAAAGAACCAAATCACCACAATTTCCATAAACTCTCTGGAATACAACGTCCTGAAAATCAACCAAGCGAATAATAGAATGAGGATAGCAAGATCAGACCTGTTCGAGAATTACTGCCCAGACAATGAAATCCAAATGGCGAGTATGGATCAGCATCTGTTCGCGTACGCTTCCAACAACCAGAACATTTCGGTATGGTACAATTGCTCGAGGGAAAACGAAATTCAAATTCCGGAGATTTACAAATTTGGGTGCGGTGGGAAATGGGCAGAAGTTGGGAGGGCGAATTATGCATTCGAACCGTCGGCGGAGATTTGGAGTCTACAAATGGGGGAATGTAGAATGAAGATAGAAGTGATGATTACGATAGAGTGGTTGAAAGAAGGTATAAAAGAGAGGAAAAGTTTAGTGGAGAAGGCTGTGAAATGGGGTTTCGATGTGGAATACGGGAATTGGTATAAGGAAGCTTGTGATGAATGCAATGAAAACGGAGGCAAATGTGGAGGGAACGGAGTTGCTAATTCTTACGACTGTAAAGCTGCTCTTCCTCGTCTTCCTCCTCCTGCCCCTAGTATCAGATCAAATGATATTTGGAAGAAGGTTGTCATAGGTGTTGGCTCTGGTTTTGGAGGCACAGTGATTATGAGTCTAATCTTTTTCATTAGGCTTCGTTTGCACAAAAACAAGCATTCTCATGCTTCTTCCTCCATTCTCCTTCAAAACAATAATTCTCGTGATCGTCTAATGAAGGAACTTGAGAAGGGAGAAAATTACATGGCTGTTCCTCTCTTCTCTTATCAAGAACTTGTACAAGCTACAAACAAATTCAACCCAGCCAACCAACTTGGAGATGGCGGCTTTGGCACCGTCTACTACGGCAAACTACTAGATGGGCGTGAGGTTGCAGTTAAACGATTGTTTGAAAATAACTACAGAAAAATTGAGCATTTCCTAAATGAAGTCGAGATCCTTACTCGTTTGCACCACCCACATCTTGTCACCCTTTATGGATGCACCTCTCGACGATCTCGTGAACTCTTGTTGGTTTATGAGTTTGTACCGAACGGTACGGTCGCCGATCATCTTCACGGCATCCAAGCAAGACCAGGTGAGCTTCCATGGCTTACAAGGTTGAAGATTGCCATAGAGACAGCAAGTTCTCTGGCTTTTCTCCATGCTTCGAAAACCATCCACCGCGATGTTAAAACCACCAACATTCTCGTTGACAACAACTTCGATGTTAAAGTCGCTGATTTTGGACTGTCTCGCCTTTTTCCGACGCAAGCTACGCATGTTTCAACTGCTCCACAAGGAACTCCAGGATATGTTGATCCAGAGTATTACGAATGTTATCAACTTACGAATAAAAGCGACGTGTTTAGCTTTGGAGTCGTGTTGGTTGAGCTGATATCTTCAAAGCCAGCAGTTGATATCACAAGGCACAGACATGAGATTAACCTGTCGACGATGGCGATCAACAAGATCCAAAACGACGAATTACAGGACTTTGTAGATCCATGTCTTGGATTCAAAACAGATGAAAGGATCAGAGACATGATATGTGGAGTTGCAGAGTTGGCATTTCAATGCCTGCAAAGTGTGAGGGATACAAGACCCTCAATGTTTGAGGCTCTAGAAATTCTGAAGAATATAGAGAGTAGAAGTTGTGGCAAAGAGAAGGCTCAATCCCCAGATTCTGCCATTTTGCCTTGA 1923 42.9 MKIYLKPRKSTFFFFFIAFHLSPCFSEEPLREFKDCGVSYNCGELVNITYPFWGNKRQSFCGRKEFKLNCKKNQITTISINSLEYNVLKINQANNRMRIARSDLFENYCPDNEIQMASMDQHLFAYASNNQNISVWYNCSRENEIQIPEIYKFGCGGKWAEVGRANYAFEPSAEIWSLQMGECRMKIEVMITIEWLKEGIKERKSLVEKAVKWGFDVEYGNWYKEACDECNENGGKCGGNGVANSYDCKAALPRLPPPAPSIRSNDIWKKVVIGVGSGFGGTVIMSLIFFIRLRLHKNKHSHASSSILLQNNNSRDRLMKELEKGENYMAVPLFSYQELVQATNKFNPANQLGDGGFGTVYYGKLLDGREVAVKRLFENNYRKIEHFLNEVEILTRLHHPHLVTLYGCTSRRSRELLLVYEFVPNGTVADHLHGIQARPGELPWLTRLKIAIETASSLAFLHASKTIHRDVKTTNILVDNNFDVKVADFGLSRLFPTQATHVSTAPQGTPGYVDPEYYECYQLTNKSDVFSFGVVLVELISSKPAVDITRHRHEINLSTMAINKIQNDELQDFVDPCLGFKTDERIRDMICGVAELAFQCLQSVRDTRPSMFEALEILKNIESRSCGKEKAQSPDSAILP 640
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 30993924 30997582 + CePI673135_01g016390.1 Cec01g1639 194856
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1639 640 FunFam Wall-associated receptor kinase-like 20 423 631 - -
Cec01g1639 640 ProSitePatterns Protein kinases ATP-binding region signature. 352 374 IPR017441 GO:0005524(InterPro)
Cec01g1639 640 Pfam Protein kinase domain 349 615 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1639 640 ProSiteProfiles Protein kinase domain profile. 346 621 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1639 640 Pfam Wall-associated receptor kinase C-terminal 172 248 IPR032872 -
Cec01g1639 640 Gene3D Phosphorylase Kinase; domain 1 317 422 - -
Cec01g1639 640 Pfam Wall-associated receptor kinase galacturonan-binding 41 101 IPR025287 GO:0030247(InterPro)
Cec01g1639 640 PANTHER LEAF RUST 10 DISEASE-RESISTANCE LOCUS RECEPTOR-LIKE PROTEIN KINASE-LIKE 1.4 18 630 IPR044652 GO:0004672(InterPro)|GO:0016301(PANTHER)|GO:0016310(PANTHER)
Cec01g1639 640 SUPERFAMILY Protein kinase-like (PK-like) 325 618 IPR011009 -
Cec01g1639 640 SMART serkin_6 346 604 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1639 640 Gene3D Transferase(Phosphotransferase) domain 1 423 637 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1634 Cec-Chr1:30964839 Cec01g1639 Cec-Chr1:30993924 8.60E-246 dispersed
Cec01g1639 Cec-Chr1:30993924 Cec06g1668 Cec-Chr6:30272827 8.20E-145 dispersed
Cec07g1597 Cec-Chr7:31504766 Cec01g1639 Cec-Chr1:30993924 1.50E-22 dispersed
Cec01g1637 Cec-Chr1:30984571 Cec01g1639 Cec-Chr1:30993924 2.60E-35 proximal
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71706 PF00069 Pkinase 1.40E-45 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1639 - - - 0.0