Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1673 TTCACCGAGTTGGAAATTGCGGTTCCTGATATTGGCATAGTTGGGTTGCACGCGGAGAATCTTGGGATTGCGAGTGTTTCAGTGGATGGTGACCCTACTGAATTCGAGTATTATCCGCGGCCTCAACATGTGGAAAGTGAGAAGAGTTTTAAAGCAGTGTCGTCGCCGAGCTCTGCTGCAGATGCTGCGGGGTCAATTTATTTGTCTTCAATCGAGAAAGAATTGGTTCCTAATTTGTTGATAAACTGCTGCAAGGCTTTCAAGAGCGGAAGTGAGCAGCAAGACCAGCCATTTCTGGAGAATGGAGTGCAACCTGCGGAGGAGGACAAGCAGAATATAAGGCTGGTTCGTATTGATTACTGGGTAGAGAAATCAGAGGTAGGTATTCACTTCTATAACCACATGGCTCACACTGACAACCAAATAAGGCGTGCAAGGTGCTGGTTCCCTTGTATGGATGATGGCCTACAACGATGCAAGTATGACCTCGAGTTTACTGTCTCTCAAAATCTTGTGGCTGTCAGTAATGGAATTCTGTTGTACCAGGTCTTGAGCAAGGACAATCCTCCCCGCAAAACTTATGTTTATCGAGTAGACATCCCCGTCAATGCACATTGGATATCACTTGCTGTTGGACCGTTTGAAATCCTTGCTGATCATCAAAATGGACTTATATCACACATGTGCTCGCCCGTTAACTCTTTAAAGCTTAAGCATACGGTGGAATTTTTTCATAGTGCATTCAGCTGCTATAAGGATTACCTTTCGGTGGACTTCCCATTTGGGTCATACAAACAAATCTTCATAGAGCCGGAGATTGCGGTATCATCAGCATGTTTGGGAGTTTCCATGTGTATATTTAGTTCTCATCTTTTGTTTGATGAGAAAATCATCGATCAGACCATAGATACTAGGATTAAACTTGCTTATGCTCTGGCAAGACAGTGGTTTGGCATTTATATTACGCCTGAAGCCCCAAATGACGAGTGGTTGTTGGATGGTCTTGCTGGTTTCTTGACTGATTTATTTATCAAGAAGAACTTGGGAAATAATGAGGCACGCTACCAGAGATACAAGGCCAATTGTGCTGTTTGTAGAGCAGATGATAGTGGTTTGACCACCTTGAGTTCCTCTTCTGCTTGCAAAGATTTGTATGGGACCCAACATATTGGTATATACGGAGAAATAAGATCATGGAAGTCTGTGGCAATCCTTCAAATGTTGGAAAAGCAGATGGGGCCTGAGTCTTTCCGCAAGATTCTACAAAATATTGTTTCTCGTGCTAAAGATACTACCGCTACGTCACACTCACTTAGCACGAAAGAGTTTCGTCAATTAGCCAATAAGATTGGAAACCTTGAGCGGCCATTTCTCAAAGAGTTCTTTCCTCGGTGGGTTGAATCATGTGGTTGTCCCCTGCTGAGGATGGGATTTTCGTACAACAAGCGGAAAAATATGGTTGAGATGGCGGTGTCACGGGAATGCACAGTTACACCAGCCACAAGTGTAGAAAATCGGGACAGTGATGCTGGATGGCCTGGTATGATGAGCATTAGGATTTATGAGCTTGATGGTGTGTTTGATCATCCAGTTCTTCCAATGACTGGAGAGTCCTGGCAGCTACTAGAAATACAATGCCACTCCAAACTTGCTGCTAGGCGCCTCCAGAAAACTAAAAAGGGATCGAAACCTGATGGTTCTGATGACAATGCTGATATACCTGCACTCGACGTTCGCTCTAGTGTGGAATCTCCTTTGTTATGGTTGAGAGCAGACCCTGAGATGGAATACCTTGCTGAAATTCATTTTCATCAACCTGTTCAGATGTGGATCAATCAATTAGAGAAGGACAAGGATGTCATTGCTCAAGCACAAGCAATCACGACATTGGAGATGTTGCCTCAACCATCTTTTTCTGTTGTTAATGCTCTTAACAATTTCCTCAGAGACCCCAAGGCCTTCTGGAGAGTAAGAATTGAAGCAGCATTGGCAATGGCCAAAACAGCCTCAGAGGATACTGATTGGGCTGGTTTGCTTAATTTGATTAAATTTTTTAAAAGTCAGAGGTTTGATGCAGATACCGGACTCCCCAAGCCAAATGAATTTCGTGATTTTCCTGAGTATTTTGTTCTTGAGGCCATTCCTCATGCTGTTGCTATGGTCAGGGCCACCGACCAAAAAAGCCCTAGAGAAGCTGTTGAGTTTGTTTTGCAACTTTTGAAGTACAATGACAACAATGGGAATCCTTACTCAGATGTTTTCTGGTTGGCTGCACTAGTCCAGTCAGTTGGTGAGCTTGAATTTGGGCAACAGAGCATTCTGTTTTTAGCATCGCTTCTTAAAAGGATTGATAGACTTCTGCAGTTTGACAGGCTGATGCCTAGCTATAACGGGATCTTGACTATTAGCTGCATCAGAACCTTGACCCAGATTGCATTGAAACTATCTGGACTTCTCTCTCTTGATCGTATCTTTGAACTGATAAGACCTTTTCGAGATTTTAAGTCCATGTGGCAAGTTCGAATTGAGGCAACTCGAGCACTTCTCAATCTTGAGTACCACTGCAATGGAATTGATGCAGCATTGTTATTGTTTATTAAATATCTAGAAGAAGAGAATTCCTTGCGAGGCCAAGTGAAGCTGGGGGTCCATGTTATGCGTTTATGTCAGATAATGAGAAGATCTGATTCAAATGATGTAGTCAATAATGACACTCTTGTAGCTTTGCTCCTCCTACTTGAAGGCCACATGGCATTTAACAATGTGCATCTTCGTCACTACTTGTTCTGTATTTTACAAGTCCTTGCAGGACGGCCCCCAACACTTTATGGAGTTCCTAGAGAATATAAAACATTGCATATGGGCGACGTGGGAACTTGCAGTGAACAGAAGAGGATGTTAACTTCTCTCATCCCTGAATTCAATCCACCAGAGCCATCATCAGTCTCTGCAGCGGCGCCTATGCCGTGTATCCCAGCAAGTCTGTCATCAGAACCACTTCATTCTTCCAAACTGAGGTCTGACAGCTTAGCAATTCCCGAGCTTTCCAAGGAAGGAGGAACAATTGCAGAGGTTCCAAAGCAAGATATGGCAATAGCAGAAGGTCCCAGAGAGGCAGCTTCTGTTTCCAATAGCCATGAGAGGAAGTTGCCAGTTGTTAAGATTATAGTCAGATCATCTGCTGCTACAAGTAGAGCAGATGCGGATAATCTAACCACTGAAAGATCTCATGCTGCACCTCGTGAAACGGATGTTGGTCCTACTAGTTCTGTTTCTGTTGATGCACCCCAAAGAAATATTGCTGAGGCTACGAGTATCAGCAACCATATTCTGGAGGAGGTTAACTCCTGTCACAATCGCGGGTCTCACATGACAGCCAGCATTGGCAGTGCAAAACTTGCGAGTTATGGTGATGAACTTGAGAAGGAGTTCCAGTGCACTGCTGATTCCAGTAGGGCTTTTGGACATTTTCAGCTAGAAGATCCTTCCTCATCGAGCATCATACAAGATAACAATATTGATGCTGATGCACAGAAGTATGCAAGTCTTCAGACACTTTCTTTACCACAGCATGATCATGGGTTAGCCTCTACGCACTCTCGCCATTGGAAAAAGGAAAAGAAGAAAGATAAAGACAAGAAACGTAAACGAGAAAGTCACAAAGAACATCGCAACGATCCTGAATACATCGAGCACAAACGATTGAAGAAAGAGAAGAAACAAAAAGAAAAAGAGATGGCAAAGCTATTGAATGAAGAGGTGAAGCCACTGCCTCTAGCAATGCCTCGTATAAAAGAACCACCAACCAAGTCAATACCTGTGCAGCTGGAAACAAAAGAACCTAGCGGATCGAGATTAATTGTAGGAGTTCATAGTAAGCCCGAGGCATCAGAAGGTACTACTTCTGCTGCCCCCAAACTTAGAATTAAATTCAAAAATCGGACACTGAACAATTCATAA 3960 43.43 FTELEIAVPDIGIVGLHAENLGIASVSVDGDPTEFEYYPRPQHVESEKSFKAVSSPSSAADAAGSIYLSSIEKELVPNLLINCCKAFKSGSEQQDQPFLENGVQPAEEDKQNIRLVRIDYWVEKSEVGIHFYNHMAHTDNQIRRARCWFPCMDDGLQRCKYDLEFTVSQNLVAVSNGILLYQVLSKDNPPRKTYVYRVDIPVNAHWISLAVGPFEILADHQNGLISHMCSPVNSLKLKHTVEFFHSAFSCYKDYLSVDFPFGSYKQIFIEPEIAVSSACLGVSMCIFSSHLLFDEKIIDQTIDTRIKLAYALARQWFGIYITPEAPNDEWLLDGLAGFLTDLFIKKNLGNNEARYQRYKANCAVCRADDSGLTTLSSSSACKDLYGTQHIGIYGEIRSWKSVAILQMLEKQMGPESFRKILQNIVSRAKDTTATSHSLSTKEFRQLANKIGNLERPFLKEFFPRWVESCGCPLLRMGFSYNKRKNMVEMAVSRECTVTPATSVENRDSDAGWPGMMSIRIYELDGVFDHPVLPMTGESWQLLEIQCHSKLAARRLQKTKKGSKPDGSDDNADIPALDVRSSVESPLLWLRADPEMEYLAEIHFHQPVQMWINQLEKDKDVIAQAQAITTLEMLPQPSFSVVNALNNFLRDPKAFWRVRIEAALAMAKTASEDTDWAGLLNLIKFFKSQRFDADTGLPKPNEFRDFPEYFVLEAIPHAVAMVRATDQKSPREAVEFVLQLLKYNDNNGNPYSDVFWLAALVQSVGELEFGQQSILFLASLLKRIDRLLQFDRLMPSYNGILTISCIRTLTQIALKLSGLLSLDRIFELIRPFRDFKSMWQVRIEATRALLNLEYHCNGIDAALLLFIKYLEEENSLRGQVKLGVHVMRLCQIMRRSDSNDVVNNDTLVALLLLLEGHMAFNNVHLRHYLFCILQVLAGRPPTLYGVPREYKTLHMGDVGTCSEQKRMLTSLIPEFNPPEPSSVSAAAPMPCIPASLSSEPLHSSKLRSDSLAIPELSKEGGTIAEVPKQDMAIAEGPREAASVSNSHERKLPVVKIIVRSSAATSRADADNLTTERSHAAPRETDVGPTSSVSVDAPQRNIAEATSISNHILEEVNSCHNRGSHMTASIGSAKLASYGDELEKEFQCTADSSRAFGHFQLEDPSSSSIIQDNNIDADAQKYASLQTLSLPQHDHGLASTHSRHWKKEKKKDKDKKRKRESHKEHRNDPEYIEHKRLKKEKKQKEKEMAKLLNEEVKPLPLAMPRIKEPPTKSIPVQLETKEPSGSRLIVGVHSKPEASEGTTSAAPKLRIKFKNRTLNNS 1319
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31375328 31396783 - CePI673135_01g016730.1 Cec01g1673 194890

Annotation

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1673 1319 FunFam Transcription initiation factor TFIID subunit 219 470 - -
Cec01g1673 1319 MobiDBLite consensus disorder prediction 558 572 - -
Cec01g1673 1319 SUPERFAMILY Metalloproteases ("zincins"), catalytic domain 229 475 - -
Cec01g1673 1319 PANTHER TRANSCRIPTION INITIATION FACTOR TFIID 1 1256 IPR037813 GO:0000976(PANTHER)|GO:0003682(PANTHER)|GO:0005669(PANTHER)|GO:0005669(InterPro)|GO:0006367(PANTHER)|GO:0016251(PANTHER)
Cec01g1673 1319 Gene3D Neutral Protease Domain 2 218 470 IPR027268 -
Cec01g1673 1319 MobiDBLite consensus disorder prediction 1198 1218 - -
Cec01g1673 1319 MobiDBLite consensus disorder prediction 1250 1285 - -
Cec01g1673 1319 MobiDBLite consensus disorder prediction 1192 1231 - -
Cec01g1673 1319 MobiDBLite consensus disorder prediction 1083 1097 - -
Cec01g1673 1319 Pfam Peptidase family M1 domain 243 441 IPR014782 GO:0008237(InterPro)|GO:0008270(InterPro)
Cec01g1673 1319 Coils Coil 1232 1255 - -
Cec01g1673 1319 Gene3D tricorn interacting facor f3 domain 2 212 IPR042097 -
Cec01g1673 1319 MobiDBLite consensus disorder prediction 555 575 - -
Cec01g1673 1319 Gene3D - 602 883 IPR011989 -
Cec01g1673 1319 SUPERFAMILY Leukotriene A4 hydrolase N-terminal domain 10 213 IPR042097 -
Cec01g1673 1319 MobiDBLite consensus disorder prediction 1063 1097 - -
Cec01g1673 1319 SUPERFAMILY ARM repeat 405 938 IPR016024 -
       

Pathway

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1673 K03128 - - csv:101210662 2385.14
       

Deco-Alignment

Select Vvi1 Blo1 Blo2 Bda1 Bda2 Bpe1 Bpe2 Bma1 Bma2 Cmo1 Cmo2 Cma1 Cma2 Car1 Car2 Sed1 Cpe1 Cpe2 Bhi1 Tan1 Cmetu1 Lac1 Hepe1 Mch1 Lcy1 Cla1 Cam1 Cec1 Cco1 Clacu1 Cmu1 Cre1 Cone1 Cone2 Cone3 Cone4 Lsi1 Csa1 Chy1 Cme1 Blo3 Blo4 Bda3 Bda4 Bpe3 Bpe4 Bma3 Bma4 Sed2 Cmo3 Cmo4 Cma3 Cma4 Car3 Car4 Cpe3 Cpe4 Bhi2 Tan2 Cmetu2 Lac2 Hepe2 Mch2 Lcy2 Cla2 Cam2 Cec2 Cco2 Clacu2 Cmu2 Cre2 Lsi2 Csa2 Chy2 Cme2
Vvi17g367 . . . . . . . . Cmo13g01082 . . . . . . Cpe20g00107 . . . . . . . . . . . . . . . Cone2ag0646 . . . Lsi02g00164 Csa01g00648 Chy12g01454 Cme12g01894 . . . Bda14g00912 . Bpe15g00546 Bma03g00887 . . . . Cma13g01041 . Car13g00873 . . . Bhi08g01209 . . Lac10g0216 . . . Cla04g01110 Cam04g1162 Cec01g1673 Cco01g1719 Clacu04g1190 Cmu04g1170 Cre01g1467 . . . .
       

Syn-Orthogroups

Select Orthogroup Bda Bhi Blo Bma Bpe Cam Car Cco Cec Chy Cla Clacu Cma Cme Cmetu Cmo Cmu Cone Cpe Cre Csa HCH Hepe Lac Lcy Lsi Mch Sed Tan Vvi Total
OG0010321 1 2 1 1 1 1 2 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 1 32