Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1680 ATGTCTTCTCTCCCATTTGCTTTCTTCTTCCTCCTCCTCTCCTTCCATTTCTTCTCGGCAATTAGCATCGATTTCCTCGTCGGCGATGAGGATGGCTGGGCAGTCCCTAAACCAAAAGAAGCTGACAAATACAACAAATGGGCTTCCCACAACAGATTCAATATCGATGACACTGTCCATTTCAAGTACGAGAAAGATTCGGTGATGATGGTGACAGAGGAAGAGTACAAACAGTGTTTTTCTTCAAAGCCTCTGTTTTATGAGAACAATGGTGATAGTGTTGTGAAACTTGATAGAGCCGGTTTGTTCTATTTCATTAGTGGAGTTTCAGGGCATTGTCAGAAAGGCCAAAGAATGATAATCAAAGTGTTGGAACCTATAAATCCTCCTCACCCACCAACTGCTCCACCAAATAACAAGAATTCTGCAGCAGCCTCTTCTAATTTGCTCTCTGTTTCATCTTCAATCTTGGGTGTGTTCTTGATGTTGTTCTTTGCTCTGTTTCTGTCCATTTGA 516 42.05 MSSLPFAFFFLLLSFHFFSAISIDFLVGDEDGWAVPKPKEADKYNKWASHNRFNIDDTVHFKYEKDSVMMVTEEEYKQCFSSKPLFYENNGDSVVKLDRAGLFYFISGVSGHCQKGQRMIIKVLEPINPPHPPTAPPNNKNSAAASSNLLSVSSSILGVFLMLFFALFLSI 171
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31435443 31436066 + CePI673135_01g016800.1 Cec01g1680 194897
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1680 171 Gene3D - 22 126 IPR008972 -
Cec01g1680 171 ProSiteProfiles Phytocyanin domain profile. 23 125 IPR003245 GO:0009055(InterPro)
Cec01g1680 171 Pfam Plastocyanin-like domain 40 117 IPR003245 GO:0009055(InterPro)
Cec01g1680 171 PANTHER BLUE COPPER PROTEIN 16 133 IPR039391 GO:0009055(InterPro)|GO:0046658(PANTHER)
Cec01g1680 171 CDD OsENODL1_like 24 124 IPR041846 -
Cec01g1680 171 SUPERFAMILY Cupredoxins 23 124 IPR008972 -
Cec01g1680 171 FunFam Early nodulin-like protein 1 22 128 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1680 Cec-Chr1:31435443 Cec09g2063 Cec-Chr9:37674639 4.20E-32 dispersed
Cec01g1680 Cec-Chr1:31435443 Cec10g0536 Cec-Chr10:6477722 2.00E-18 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1680 - - - 0.0