Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1709 ATGATTAGAATTAAAGGGGCCAAGGATGTAGAAGCCTTTACTGTGCTAGCAATAATGGAGACAGCGAACTCGTCTACAATCACCGATCGTGCTGGCCGTCGCGCTGCCAGGTGTATCGCCGTGCGATTTTCTCTCCGTCTCTCTGTATCTTGCATTCTTTTTTCTCTCAACTCCGCTGATGGTTGGCCGGCTGCCGCACAACACGCTCTCAGTCGTTGGAATCGCCCAGGCGTCGTCGAATCTTTCGCCTTCAGCAGGCACTTCGCAGTAAGGAGCTTGGATTTAAGGGATTGGAGGATTTTAGCACGCTACCAGCGAATTAAGCTTTTTCGGCAGAAATCAGTGGGTAGTGCCATGGAAGAAGAGATCGGAGAAGAATTCAAGAGGAGTGGTTTCACGTTCGATGAAGAGGAAGAGATTCTCCAAAAATGTGTTACGTTCTGTGTTAATTACAATCTAAAGCCTTCAGATATTGTTTCTAGCTGGGAGGTCTACTCTCTCAACAGGCAATTAGATGGGTCATTGGTGCAAATTGAACAGATGGATGGGTTCTTACAACATTTACAGAATGAGCAAAAAGAAGCAGTCATTAAAGGGGAACCAGATCTTCATGTTTACTCGAGCAAAGATGTGGAAGCGATTTTGAATGATGAGGATGAAGATCTAAATGGAGACATTCTTAAGACTCCAAATGGGAAATCTCAGAGCCTCCACAAAGAGCGATTGGGTTTGACACCTTACACGAATGAAGGCTTGTTCTCCTCGGGAAAGCCTTCAAAGCATGTTACACCCTTTGGCCAAAGAACAGAGAAGTTTGTTGTGAGGCTCAACATTAATAGCATGCCTGATAAGGTGACGGCTGAAAAGGAAGATAATTGCGAGAATGATGAAGATGCAATCATCAAGAAGGTTCGACCCCTGCAAGGATGCTTATTGACAGTCCATGGATCAGGATTTGGACTTGAACCAAATTGCAGGTTCATGTATGACAAGGATGAAGATAGGTTTAATGCTCTTGATAACCGAATCATGAGGCATGCTAAAGCTCTTACTGCATCTGGGCTCTACGAAGAAGCAGTGGACCCTACAGTTGCTTCACAGAAAAACATGTTTGCAGTGGGCATGATTTATTGTGATGGTGAAGGACACTTGAATGATAAGTCCACCTTGTTGCAAAGCAGTATCACGCATTCAGGGGGGCAGCGAGTTCGTCTAGAATTACAACACTTAAACCAATTTTCAATCTTTCCTGGCCAGGTAGTAGGTATTGAAGGGCATAATCCTAGTGGACACTGCTTGATTGCGTCCAAACTTGTAGATTCTTTTCCTTTGTCTGCCACTATAGACCCCATTCTGCCTCCAGCAAAGAAGATAGCTTTGAACCATGATATCCAACCGATTAATCAATCCTCTACACCGTCAGAATTATCGATGATCATTGCATCCGGGCCCTATACAACAACGGACAACTTATTGTTTGAGCCTTTGAATGAGTTATTAGCATATGCAAAAAGAAAAGTTCCCCAGCTACTAATATTGCTTGGGCCATTTGTTGATTCTGAACATTCTGATATCAAGAGAGGAACTGTAGAGATGAGCTTTGAGGAAATTTTCAACTTTGAAGTTTTAAGAAGGGTACAAGATTATGCAGAACACATGGGTCCTGATGCACGTGTACTGTTGATGCCGTCTACAAGGGATGCTCATCACGACTTTGTTTTTCCTCAGCCTGCTTTTGACATTCCATCTGATCTCAGACTTCAGATATCCAGTCTCCCAAACCCATGCATTTTGGAAGCAAATCAGGCAACGATAGCCTGCTGCACCATGGATATTCTCAGACACCTTAGTGGAGAAGAGCTGTCAAGAAACCTAACTAAGGGAGCAACCAACGACCGCCTGAGCACACTTGCAAGTCATATACTTCGCCAGCGCAGCTTTTATCCTCTATACCCTCCAGCCGAAGGGGTTCCACTAGACTTTTCACTTGCCCCAAAAGCTCTTGACATTACTGTAATACCCGATATTCTCATTCTTCCATCCGACATGAAACACTTCGTGAAGGTCATATCCCTTGGTGAAGGAGGTTCAGAGGAAGAGCAAGCGAGATGCATATGTGTGAATCCTGGAAGATTGGCCAAGGGTGAAGGAGGAGGTACTTTTGTAGAGCTTAATTACTTCGGTAGGCCTGACCAGATAAATGCTTCAGTTGTCAGCATATGA 2223 44.31 MIRIKGAKDVEAFTVLAIMETANSSTITDRAGRRAARCIAVRFSLRLSVSCILFSLNSADGWPAAAQHALSRWNRPGVVESFAFSRHFAVRSLDLRDWRILARYQRIKLFRQKSVGSAMEEEIGEEFKRSGFTFDEEEEILQKCVTFCVNYNLKPSDIVSSWEVYSLNRQLDGSLVQIEQMDGFLQHLQNEQKEAVIKGEPDLHVYSSKDVEAILNDEDEDLNGDILKTPNGKSQSLHKERLGLTPYTNEGLFSSGKPSKHVTPFGQRTEKFVVRLNINSMPDKVTAEKEDNCENDEDAIIKKVRPLQGCLLTVHGSGFGLEPNCRFMYDKDEDRFNALDNRIMRHAKALTASGLYEEAVDPTVASQKNMFAVGMIYCDGEGHLNDKSTLLQSSITHSGGQRVRLELQHLNQFSIFPGQVVGIEGHNPSGHCLIASKLVDSFPLSATIDPILPPAKKIALNHDIQPINQSSTPSELSMIIASGPYTTTDNLLFEPLNELLAYAKRKVPQLLILLGPFVDSEHSDIKRGTVEMSFEEIFNFEVLRRVQDYAEHMGPDARVLLMPSTRDAHHDFVFPQPAFDIPSDLRLQISSLPNPCILEANQATIACCTMDILRHLSGEELSRNLTKGATNDRLSTLASHILRQRSFYPLYPPAEGVPLDFSLAPKALDITVIPDILILPSDMKHFVKVISLGEGGSEEEQARCICVNPGRLAKGEGGGTFVELNYFGRPDQINASVVSI 740
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 31726062 31736145 - CePI673135_01g017090.1 Cec01g1709 194926
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1709 740 PANTHER DNA POLYMERASE 2 ALPHA 70 KDA SUBUNIT 120 726 IPR016722 GO:0005658(PANTHER)|GO:0006270(PANTHER)
Cec01g1709 740 Pfam DNA polymerase alpha subunit B N-terminal 121 180 IPR013627 -
Cec01g1709 740 Pfam DNA polymerase alpha/epsilon subunit B 479 688 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
Cec01g1709 740 Gene3D - 117 195 IPR043034 -
Cec01g1709 740 Pfam DNA polymerase alpha subunit B, OB domain 339 439 IPR054300 -
Cec01g1709 740 PIRSF DNA_pol_alpha_2 117 732 IPR016722 -
Cec01g1709 740 Gene3D - 631 737 - -
Cec01g1709 740 Gene3D - 457 629 - -
Cec01g1709 740 FunFam DNA polymerase alpha subunit B 118 192 - -
Cec01g1709 740 FunFam DNA polymerase alpha subunit B 459 623 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1709 K02321 - csv:101206268 1172.53