Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1748 ATGGCGCTGTTTAGAAAATTATTCTACCGGAAGCCTCCAGATCGGCTTCTCGAGATCGCGGAGAGAGTGTACGTGTTTGATTGTTGCTTCTCTACCGAGGTGTTGGAGGAGGATGAGTACAGAGTGTACTTGGGTAGCATTATACCAAAGCTGCAAGACCACTTTCCGGATGCATCTTTCATGGTGTTTAACTTTAGTGAACGAAAGAGGAAGACTAAAACTTCGGACATCCTGTCTCAATATGGTATGACAGTGATGGAATATCCTCTTCAATATGAAGGGTGTTCACTACTGCCATTGGAGATGATCCACCACTTCATTCGATCGAGTGAAAGTTGGTTGTCATTGGAGAGACAGAAAAATGTATTGTTGATGAACTGTGAACGAGGAGGATGGCCAATCCTTGCTTTCATGCTTTCAGGTCTTTTATTGTACCGTAAACAATATGAGGGGGAGCAGAAGACCCTTGAAATGGTCTATAGGCAAGCTCCTAGAGAACTTTTCCATGTCCTATCTCCTGTAAACTCACAGCCTTCTCAAATGAGATACCTTCAGTATATTTCTAGGAGAAATTTAGGTTCTGATTGGCCTCCACCTGATACACCCCTAATTTTAGACTGTCTGATACTTCGAGAGCTTCCTATGCTTGGTGGAGGAAAAGGATGGAGGCCTATCATACGCATTTACAGTCAGGACCCATTAACACCACGAAATAGAAGCCCAAAACTTGTCTTCTCGAGCGCAAAGAAGGAAAGACATGGTTGCCAGTATCTACAGGCAGCAAGCAGATTAGTAAAAGTGGATGTCCATTGTCACATTCAAGGCGATGTTGTTCTTGAATGCATCCGTTTAGATGGAGATCTAATACATGAGGAAGTGATGTTTAGAATTATGTTTCACACTGCATTTGTGCATTCAAACAGTTTGAAGCTCAATTGTGATGAGGTTGATGTTTTATGGGATGCCAAGGAGCAGTTTTCTAAAGATTTTAGAGTAGAGGTACTTTTTCTGGATGCTAATCATGTTGTGCCAAACAACCGTCCCTCGACCAGAAGTGATGATAAAATTGAGATTGAAAGCAATTCAACTGAGGAATTTTTTGAAGTGGAAGAAATATTTAGCAACATTGTTGACGTGCAGGAAGTTAAGAGGGATTACGATGTTCAAACGGTACATGCTAACGAAACAGATTATATTGACCATCAAGCAGTTTGGAAGGAGGATGCAGATCCACCTACATTCCAACGCTGTAAATCATTTGGAGGGAGTCAAAACTTGGACAAGAAGATAGATTGTAACGTTGAAGCAGTGAAGGACATTACTGTTGATGATGTAACTTTCAAGACAGCTGAAAAAGTGGACTCTGGTCTTCAAGTAGTGAAGGACATTGTTGTGGATTATGGAGATAAGAAGCCAAATCCTCTGCTATTTTCTGTTAATGTACTGAGACGTATGGCAATCAAGGAACTGATTGATGATACTTATGACAAGTTGGAAGGGGTGCAGCATAAAGGGTACGGAGAAGATACTGCCATTCCACACTTTGAATCAAAGGTTCCTTCGAAAAAGTTGGAAGCTGATGCGTGGAGGCTTAAATTTGAGAAGTTGCAATCAACGTCAAGGAAACAGCCGTCATCAACAATTAAGCCAATAAATCAGAAAACCAAACAGCCAGAAGATCAGTTTCTTGTAAAACAGGCCAAACCAAATACTCTTTCTAGATTGATTTCACATGACAAAGAACCTTACACAAACTCCATGCATTTGTTTTATCCACCATCAAGGCATACTGGTGACTCAGCAACAGCTATTAGTTCTCCTACTAAAGATTTTTATTCATATTCAACTTTAAAATCTGCTTCTGCTTCTGCTACTTCAGGACTGCTGCTGTCTGATACAGCTGATGAACAAAAAAGTGACAAGGTGAGTCCTAAGAAACCTTTATGTTCTGCAACAGAGATTCTCAAGAGTAAACCACAATCACCACTTGACTCCTCAAGACCATTGCCAAACGCTGTTCAGTATCAAGATCCTACTCTTCCTCTATCCGCTACTACACTTCTACAGCCACCAGCTCTTCAGGCCAACACATCTTTCTTGCATGCATCATCTCCTAAATCTTCTTTGTCTCCCTCTACACATTATCACAAAAATGCAAGATCTCCTCCTCCAGCTTCGCCTCCACCACCACCTCCTCCACCTAAAAGTTCATCATTAGTGTGTGGAAATACACCTAAGCATAGTGCTCCACCAGCACCACCTCCACCTCCCATACGTAGAGCTCAACCACAATTACCTCCCCCACGACCACCCTCATCACATGGAGCTCTGCTTTCTCCATGCCTATCAAATGCTGGAACTTTTCCACCACCCCCTCCGCCACCTCCTCCAATTCAGAGGAGAGCTCCTCCACATTTAACCCAGGGGCAACAGGCTTTAACATCTGCAACAGCCTGTGTTGTCTCATCTTCCCTGCCATCTCCAATTTGTGAAGCACCATCACCTCCTCAACCTACAACTGGTCCCCTTCCCCCGGTTCCTTCTTCTTCTTCTAAACCTTCAGGAGGTATGACTCCACACCTGGGAGCTAAAGGAGTAAGTTCTTCAACTGATGTGAAAACATCATCTATAGTGAGGGGACGTGGGTTCTCGCGGTCAACTGGGATGGGGGTGGCTACTACAGGCCTTCAACGATCATCATTGAAACCTCTGCATTGGAGCAAGGTGACTCGGGTACTACAAGGGAGCTTATGGGAAGAATTGCAAAGATGCGGAGATTCTGAAAGTGCACCAGAATTTGATGTATCTGAGCTGGAGACGCTTTTCTCTGTGATTGTCCCTAAACCTATTGTTGATTCCGGAGGTAAATCTGGAGGACGAAGGAAGTCAGTTGGATCAAAATTGGACAAAGTTCACTTGATTGATCTTAGGAGGGCAAATAACACTGAAATCATGCTAACAAAAGTTAGGATGCCACTATCTGATATGATGGCAGCAGTACTCTCCATGGATGAGTCAGTACTAGATGTAGATCAAGTGGAAAATCTTATCAAATTTTGCCCCACCAAAGAGGAGATGGAGCTTCTCAAGGGATACTCTGGTGACAAGGATAAACTTGGCAAGTGCGAACAGTACTTTTTGGAGATGATGCAAGTTCCTCGTGTGGAGTCAAAGTTAAGAGTGTTTTCTTTCAAGATTCACTTCAGCTCTCAGATAGCAGAGTTCAGAACAAGCCTAAACACTGTAAACTCTGTCTGTCAAGAGGTGAAGAATTCTCGCAAATTGAAGGAGATAATGAAGAGAATTCTTTGCCTGGGAAATATGCTGAACCAAGGAACAGCTAGGGGTTCGGCAATTGGATTCAGGTTGGATAGCCTCTCAAAACTCACTGATACACGTGCTTCTAACAATAAGTTGACTCTCATGCATTATCTGTGTAAGGTCCTTGCTTCGAAGTCACCATCACTTCTTGATTTTCATCTGGACCTTGGTAGCTTAGAAGCTGCGTCTAAGATACAATTGAAATCTTTGGCAGAAGAAATGCAGGCAATAACAAAAGGATTGGAAAAGGTGAAGCAGGAACTGGTTGCATCTGAAAGCGATGGCCCCATCTCTGAAACTTTTCATAAGATATTGGAAGGATTTGTTACTCTTGCCGAGATGGAGGTGGAATCTGTGACAGTTCTTTACTCAGTGGCGGGTAGAAATGCTGATGCACTTGCACTATATTTTGGCGAGGATCCTGCCCGTTGTCCATTTGAACAAGTTACAGGAACCCTCTTCCATTTTACAAGGTCCTTTTTGAAAGCACATGAAGAGAACTGCAAGCAGTTAGAAATGGAGATGAGAAAGATGAGAAAATAG 3864 42.86 MALFRKLFYRKPPDRLLEIAERVYVFDCCFSTEVLEEDEYRVYLGSIIPKLQDHFPDASFMVFNFSERKRKTKTSDILSQYGMTVMEYPLQYEGCSLLPLEMIHHFIRSSESWLSLERQKNVLLMNCERGGWPILAFMLSGLLLYRKQYEGEQKTLEMVYRQAPRELFHVLSPVNSQPSQMRYLQYISRRNLGSDWPPPDTPLILDCLILRELPMLGGGKGWRPIIRIYSQDPLTPRNRSPKLVFSSAKKERHGCQYLQAASRLVKVDVHCHIQGDVVLECIRLDGDLIHEEVMFRIMFHTAFVHSNSLKLNCDEVDVLWDAKEQFSKDFRVEVLFLDANHVVPNNRPSTRSDDKIEIESNSTEEFFEVEEIFSNIVDVQEVKRDYDVQTVHANETDYIDHQAVWKEDADPPTFQRCKSFGGSQNLDKKIDCNVEAVKDITVDDVTFKTAEKVDSGLQVVKDIVVDYGDKKPNPLLFSVNVLRRMAIKELIDDTYDKLEGVQHKGYGEDTAIPHFESKVPSKKLEADAWRLKFEKLQSTSRKQPSSTIKPINQKTKQPEDQFLVKQAKPNTLSRLISHDKEPYTNSMHLFYPPSRHTGDSATAISSPTKDFYSYSTLKSASASATSGLLLSDTADEQKSDKVSPKKPLCSATEILKSKPQSPLDSSRPLPNAVQYQDPTLPLSATTLLQPPALQANTSFLHASSPKSSLSPSTHYHKNARSPPPASPPPPPPPPKSSSLVCGNTPKHSAPPAPPPPPIRRAQPQLPPPRPPSSHGALLSPCLSNAGTFPPPPPPPPPIQRRAPPHLTQGQQALTSATACVVSSSLPSPICEAPSPPQPTTGPLPPVPSSSSKPSGGMTPHLGAKGVSSSTDVKTSSIVRGRGFSRSTGMGVATTGLQRSSLKPLHWSKVTRVLQGSLWEELQRCGDSESAPEFDVSELETLFSVIVPKPIVDSGGKSGGRRKSVGSKLDKVHLIDLRRANNTEIMLTKVRMPLSDMMAAVLSMDESVLDVDQVENLIKFCPTKEEMELLKGYSGDKDKLGKCEQYFLEMMQVPRVESKLRVFSFKIHFSSQIAEFRTSLNTVNSVCQEVKNSRKLKEIMKRILCLGNMLNQGTARGSAIGFRLDSLSKLTDTRASNNKLTLMHYLCKVLASKSPSLLDFHLDLGSLEAASKIQLKSLAEEMQAITKGLEKVKQELVASESDGPISETFHKILEGFVTLAEMEVESVTVLYSVAGRNADALALYFGEDPARCPFEQVTGTLFHFTRSFLKAHEENCKQLEMEMRKMRK 1287
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32075253 32084903 + CePI673135_01g017480.1 Cec01g1748 194965
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1748 1287 MobiDBLite consensus disorder prediction 804 828 - -
Cec01g1748 1287 SMART PTEN_C2_2 198 338 IPR014020 -
Cec01g1748 1287 Gene3D Protein tyrosine phosphatase superfamily 14 204 IPR029021 -
Cec01g1748 1287 SUPERFAMILY Formin homology 2 domain (FH2 domain) 789 1287 - -
Cec01g1748 1287 ProSiteProfiles Formin homology-2 (FH2) domain profile. 891 1287 IPR015425 -
Cec01g1748 1287 MobiDBLite consensus disorder prediction 747 774 - -
Cec01g1748 1287 MobiDBLite consensus disorder prediction 701 719 - -
Cec01g1748 1287 Coils Coil 1174 1194 - -
Cec01g1748 1287 ProSiteProfiles C2 tensin-type domain profile. 200 339 IPR014020 -
Cec01g1748 1287 MobiDBLite consensus disorder prediction 654 676 - -
Cec01g1748 1287 MobiDBLite consensus disorder prediction 721 738 - -
Cec01g1748 1287 PANTHER FORMIN-J 1 1285 IPR051144 -
Cec01g1748 1287 MobiDBLite consensus disorder prediction 785 802 - -
Cec01g1748 1287 SUPERFAMILY (Phosphotyrosine protein) phosphatases II 14 188 IPR029021 -
Cec01g1748 1287 MobiDBLite consensus disorder prediction 829 849 - -
Cec01g1748 1287 Pfam Formin Homology 2 Domain 899 1267 IPR015425 -
Cec01g1748 1287 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 200 336 IPR035892 -
Cec01g1748 1287 SMART it6_source 891 1286 IPR015425 -
Cec01g1748 1287 MobiDBLite consensus disorder prediction 536 560 - -
Cec01g1748 1287 Pfam C2 domain of PTEN tumour-suppressor protein 198 336 IPR014020 -
Cec01g1748 1287 MobiDBLite consensus disorder prediction 634 676 - -
Cec01g1748 1287 MobiDBLite consensus disorder prediction 701 875 - -
Cec01g1748 1287 Gene3D - 205 336 - -
Cec01g1748 1287 MobiDBLite consensus disorder prediction 538 560 - -
Cec01g1748 1287 Gene3D Formin, FH2 domain 893 1278 IPR042201 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1748 Cec-Chr1:32075253 Cec05g1807 Cec-Chr5:29912873 7.60E-251 dispersed
Cec01g1748 Cec-Chr1:32075253 Cec06g1796 Cec-Chr6:31425987 0.00E+00 wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1748 K28090 - csv:101221127 2120.51