Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1783 ATGGAAGCTGGAAATGACCAACTTCAGTATCACCAAAACCATCGCTCAACAACTTCTTTTCCTCTCCAATTGTTAGAGAAGAAGGAATATGATAATAATCCCCAACCTCCCCTTGACATCATCTCTAAGAAGCCCTCTCCCAAGAGAACTTCTACTAAGGACCGCCACACCAAAGTGGACGGCCGCGGTCGTCGCACCCGAATGCCTGCTCTCTGTGCTGCTAGAGTTTTCCAGCTCACTCGTGAGCTCGGCCACAAGTCCGATGGCGAAACCATTGAATGGCTTCTTCAACAGGCGGAGCCTGCCGTTATCGCCGCCACTGGGACCGGTACTATTCCTGCAAACTTTAACTCTCTCAACACGTCGTTGAGAAGATCGGCCACAAGCATTTCTTTGCCATCTCAACTAAGATCCTCATCTTACTACCACCCGGGAGTGATGGGGTTCAACTCTGAAGCAATGACTAATAATATGACGCAACCAAAAGAAGATCATCACTATCTACACCAATCCACCACGGGCCTAATCCCCACCACGATTCCGGCCAACTTTTGGATGCTTTCCGACGCCAACAACCAATTACTCGGCGGCGGAGGCGACTCTCTATGGAGGGTTCAGTCGGCCAACAACCAAGACGCCGCTTTATACAGATTAGGACAACCCTCCGGTGGTAATAATTTACGTTTATCCAATAATCTGGCTGCTCCATTGACGCTCCTCCCTGGAAAGCCACTATCTTTGGGACCCACTGCCGGAGGTGGACGTGGAACCATGAATGATGACGGACACTTGAATATCTACGCCGCCCAAGATCCGCCGCATGGGGAGGCTCCCGACACCGGCGTCTCCTAA 852 51.17 MEAGNDQLQYHQNHRSTTSFPLQLLEKKEYDNNPQPPLDIISKKPSPKRTSTKDRHTKVDGRGRRTRMPALCAARVFQLTRELGHKSDGETIEWLLQQAEPAVIAATGTGTIPANFNSLNTSLRRSATSISLPSQLRSSSYYHPGVMGFNSEAMTNNMTQPKEDHHYLHQSTTGLIPTTIPANFWMLSDANNQLLGGGGDSLWRVQSANNQDAALYRLGQPSGGNNLRLSNNLAAPLTLLPGKPLSLGPTAGGGRGTMNDDGHLNIYAAQDPPHGEAPDTGVS 283
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32310893 32312717 + CePI673135_01g017830.1 Cec01g1783 195000
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1783 283 MobiDBLite consensus disorder prediction 246 283 - -
Cec01g1783 283 PANTHER TRANSCRIPTION FACTOR TCP4-RELATED 42 166 IPR005333 GO:0003700(PANTHER)|GO:0003700(InterPro)|GO:0005634(PANTHER)|GO:0043565(PANTHER)
Cec01g1783 283 Pfam TCP family transcription factor 50 153 IPR017887 -
Cec01g1783 283 ProSiteProfiles TCP domain profile. 52 106 IPR017887 -
Cec01g1783 283 MobiDBLite consensus disorder prediction 46 62 - -
Cec01g1783 283 MobiDBLite consensus disorder prediction 1 23 - -
Cec01g1783 283 MobiDBLite consensus disorder prediction 1 62 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1783 Cec-Chr1:32310893 Cec11g1393 Cec-Chr11:28166933 4.40E-34 dispersed
Cec05g1534 Cec-Chr5:20053651 Cec01g1783 Cec-Chr1:32310893 1.60E-29 transposed
Cec01g1783 Cec-Chr1:32310893 Cec05g2670 Cec-Chr5:37290645 8.00E-44 wgd
Cec01g1783 Cec-Chr1:32310893 Cec06g1822 Cec-Chr6:31656827 8.20E-57 wgd
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
28945 PF03634 TCP 5.30E-36 No_clan Cec TF
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1783 - - - 0.0