Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1798 ATGCGGGAACTTGGACAGGTAAATGGAGAGAAACGGGCGCAGGGGATAGTGGCGTGGTGGTATGAAGAGTGGTCGGGGCCGAAGCCCAATCACGTGAACTTCAGCCACTACCCGTTTACCTCGTTGTCCCGTTCAGCTCTCCATTTTCTTGTAGTGATCATGGGCAGGAAGAAGAGGACCGATGCTGGTGGTGAAAGTTCCGAGTCTCAAGATGGTGGTGGTCGTGGCTCTCAACGATCAGGTGAAAGGAGAGACGGCCCACAGCAACATGGTGGGAGTGGGTACCAGGGTGGTAGAGGTTGGGGTTCTCAAGGGGGACGTGGAGGCCAAGGCAGTGGTGGTCGTGGCCGAGGAACGTCACAACATCAGCACTATGGAGGACCTCCTGATTACCAAGGCAGGGGTAGAGGTGGAGGTGGGCCATATCAGCATGTAGCACGCAGTAACTATGGTGGTGGTAATCGTGGAGGCATGGGTGGTGGTGGCATTGGGGGAGGACCTTCTTCTGGTGGACCATCCAGGCCACCAGTTCCCGAGCTGCACCAAGCAACCTCAGTGTATCAAGGAGGGATGACTCAGCCAGTCTCCTCTGTGGCGAGTTCTTCCTCCCACCCATCTTCTGATACTTCATCAATTGATCAACAATTTCAACAGGTTTCCATCCAACAGGAATCTTCTCAAAGCCAAGCAATTCAACCTGCACCGTCTAGTAAATCCATGAGATTCCCTCTGAGACCAGGAAAGGGTAGCTCTGGCATAAGGTGTATCGTTAAAGCTAACCACTTCTTTGCCGAGTTACCAGACAAAGATCTTCATCAGTATGATGTTACCATTACCCCAGAAGTCACTTCGCGGGTCTACAATCGAGCTGTAATGGAACAACTAGTGAAATTATATAGGGTCTCGCACCTTGGGGATCGGCTTCCTGCTTATGATGGAAGAAAAAGTTTATATACGGCTGGTCCCCTCCCTTTCATATCTAATGAGTTTAGAATAACTCTTTTTGATGAAGAAGATGGATCCGGAGGACAAAGACGGGAGAAAGAATTTAAAGTTGTGATCAAGTTTGCTGCTCGTGCTGATCTGCACCATCTTGGACTCTTTTTGCAAGGCAGACAGGCTGATGCCCCTCAAGAAGCCCTTCAAGTTCTGGATATTGTATTACGCGAACTGCCTACTTCAAGGTATTGTCCAGTGGCCCGATCATTTTACTCTCCAGACCTTGGCAGACGTCAGACACTGGGTGAAGGGTTGGAAAGTTGGCGTGGCTTTTATCAGAGTATCCGCCCTACTCAAATGGGGCTCTCCCTTAATATTGATATGTCATCTACTGCTTTCATAGAGCCTTTGCCTGTCATTGATTTTGTGACTCAACTTCTTAATCGTGATGTGTCGTCCAGACCATTATCTGATGCTGATCGTGTGAAGATAAAAAAGGCTCTCCGAGGTGTCAAGGTTGAAGTGACACACCGTGGGAATATGCGCAGAAAATATCGCATTTCTGGTTTGACATCACAAGCAACAAGGGAGCTAACTTTCCCAGTTGATGAAAGAGGTACTATGAAGTCGGTGGTTGAGTACTTCTACGAAACATATGGGTTTGTTATCCAACATACCCAGTGGCCTTGTCTTCAAGTAGGGAATCAGCAGAGACCTAACTATCTACCCATGGAAGTATGTAAGATTGTTGAAGGCCAGAGGTATTCCAAAAGGCTCAATGAAAGACAAATAACTGCTCTGCTCAAGGTTACATGCCAACGGCCAAAAGATAGAGAAGAAGATATTATGCAGACGGTACGTCATAATGCATATCAAAATGATCCATATGCAAAGGAGTTTGGAATTAAGATAAGTGAGAAGCTTGCTTCTGTTGAAGCTCGTATTCTTCCAGCACCATGGCTAAAATATCATGACACCGGCAGAGAAAAAGATTGTTTGCCACAAGTTGGACAGTGGAATATGATGAATAAGAAAATGTTCAATGGTGGTACTGTTAACAACTGGATGTGCATTAATTTCTCTCGCTATGTGCAAGACAGTGTTACTCGTGGGTTTTGTTATGAACTTGCTCAAATGTGTTACATTTCTGGCATGGCTTTCAATCCAGAACCAGTGCTTCCTCCTATTTTTGCTCGTCCTGATCATGTGGAAAAGGCCCTTAAAACTCGGTACCATGATGCAATGAGCATTCTCCAACCCCAGGGCAAGGAGCTTGATCTGCTTATTGTTGTATTGCCAGATAACAACGGATCTCTTTATGGTGATTTAAAACGTATCTGTGAAACAGATCTCGGCCTTGTTTCCCAGTGCTGTTTGACTAAACATGTCTTCAAAATGAGCAAACAGTACTTGGCCAATGTGGCCTTGAAAATAAACGTTAAGGTTGGGGGAAGGAATACAGTACTTGTTGATGCGTTATCTAGGCGTATACCTTTGGTTAGTGACCGGCCTACCATTATATTTGGTGCTGATGTAACTCATCCTCACCCAGGAGAAGACTCAAGTCCATCCATTGCAGCTGTTGTGGCTTCTCAAGATTGGCCAGAAGTTACAAAATATGCTGGTTTGGTTAGTGCCCAAGCCCACAGGCAAGAGCTTATTCAAGATCTTTTCAAAACATGGCAGGATCCTGTTAGAGGGACAGTAACGGGTGGAATGATCAAGGAACTCCTCATCTCCTTCCGTAGAGCAACTGGACAGAAACCTCAACGAATTATATTTTACAGGGATGGGGTTAGCGAAGGACAGTTCTACCAAGTTTTGTTGCATGAGCTGGATGCGATTAGAAAGGCATGTGCTTCTTTGGAACCAAACTACCAACCACCCGTGACATTCGTTGTGGTACAGAAGCGTCATCACACTAGGTTGTTTGCTAACAACCATTCTGATCGCCATGCAGTCGACAAGAGTGGGAACATATTACCTGGTACGGTTGTTGACTCCAAAATTTGTCACCCTACGGAATTTGACTTTTACCTGTGCAGTCATGCTGGAATCCAGGGTACAAGTCGTCCTGCTCATTACCATGTTCTGTGGGATGAGAACAAGTTCACAGCTGATGGATTGCAGACTCTAACGAATAATCTTTGTTATACGTATGCAAGGTGTACTCGCTCTGTTTCCATTGTGCCCCCAGCGTACTACGCTCATCTTGCTGCATTTCGAGCTCGTTTTTATATGGAACCTGAAACCTCCGATAGTGGGTCAATTAGCAGTGAGGCTGCTGCTGGACGTGGTGGCGTTGGTGCTCGCAGTACACGGGCACCGGGGTTGAATGCTGCTGTTCGACCTTTGCCTGCTCTGAAAGAGAATGTTAAGAGGGCTGCTGCAGTTATGGAACTGAAAGAAGGAAAGAATAAAAGCCACCCTCCAATACCAATCACAAGGCAAAAGCAAGGCAATCATCACTTTATCATCAAGTTGAAAACTGTTTCAGAAGACAATAAGAAAGAAGGTTGTGTAATTATAGCCATGGAAGCAGCCAGTTTGATGAGATTAGACACACCAATTTCTGACAGTCTAAACAATGCATTGAGGAGATCCCATAACTCAATGAAGAAATGCTTTGCCAGGTTTGTTGAGAATGGGAAGAGGTTGATGAAATGCCAGGATTTGATGAAAGATGTGGAGATAACGATTGAAGATAAGCGTGAGAGAAGCCATGTTTTGGAAGGCTTTCTTGGCTACATTCTAAGTAACACTCAGGAGGCTGCTGTTGTCCCTCCGAACATCGCTCTAGCCGTTAGGCCGAGTCCCGGTTTCTGGGAGTTCGTTAAGGTGAATGCTACAAGTTTGGAAGTAGGAGACCTTACTGTTTCAGAGTACTTGAAATTTAAGGAAGCCATCTTTGATGAGAATTGGGCAAATGATGAAAATGCTCTTGAGATAGATTTTGGAGCCATTGAATTCAGTGCCCCTCGCTTGAGCCTTCCTTCGTCGATTGGAAACGGAGTCAACTTGATCTCAAAATTCATCAGTTCAAGGTTTGGTGAGGATAAACAGAATGTCAAGGAACTTGTTGATTATCTGCTGGCTCTTCACCATCGAGGACAGAGTCTTATGATCAATAAGAAACTTAATACCGTTTCCAAGCTTCAATCGGCATTGTTTGCAGCTCAAGTATATCTATCTTCACTGCCAAAAGACACGCCATATGAAGAATTCAAGCACAAGATGAAAGGATGGGGATTTGAGAAAGGATGGGGAAGTACTTCAGAGAGGGCCAGAGAAACAATGTTAATCCTTTCTGAGGTCCTCCAGGCACCAGATCCAGCAAAATTGGAGTTACTGTTTAGCAAGCTTCCAACCACATTGAATATTGTAATCTTTTCACCTCACGGTTATTTCGGCCAGGCAGGCGTCCTCGGTTTGCCCGACACCGGCGGTCAGATTGTCTACATTCTGGATCAAGTGAGAGCTTTAGAAGAAGAGTTGCTGCATAGAATTGAACTGCAAGGCCTTCAAGCAAAGCCTCAGATTCTTGTGGTGACAAGATTAATACCCGATGCACGAGGCACGAAGTGCAATGTGGAGTTGGAGCCTATTGAGAACACAAAACATTCTCACATTCTCAGGGTGCCATTCTTCACACAAAATGGAGTTCTTCACCAATGGGTTTCACGCTTCGATGTCTACCCATACTTGGAGAGATTTGCCAAGGATGCCACTAGCAAGATCCTTGAAGTCATGGATTGCAAACCAGACCTCGTCATTGGCAACTACACTGATGGAAACTTGGTTGCTTCTTTGATGGCTAAGAAACTTGGAATTACACAGGGAACTATAGCACACGCTTTAGAGAAAACAAAATATGAGGATTCAGATGCTAAGTGGAAGGAACTTGATCCAAAGTATCATTTTTCATGTCAATTCACAGCTGATTTGATCTCAATGAATGCAACTGATTTCATTGTAACGAGTACATATCAAGAAATTTCAGGAAGCAAAACCAGGCCAGGACAATATGAAAGCCATGAGGCCTTTACTATGCCTGGACTTTACAGGGCAGTCTCAGGTATTAATGTGTTTGACCCCAAATTCAACATTGCTGCTCCTGGGGCTGATCAATCTGTCTATTTTCCTTTCACTGAGAAATCAAAGCGACTGACTAATCTTCATCCCGATATCGAGGAACTACTTTATAGCAGAGAAAACAATGATGAACACATAGGTTACCTTGCAGATAAGAAGAAGCCAATTATTTTCTCAATGGCAAGGCTTGATACAGTGAAAAACATTACTGGGTTGACTGAATGGTATGGTAAAAACAGGAAGCTGAGAAGTTTAGTAAACCTTGTGGTGGTAGCTGGATTCTTTGATCCATCAAAATCAAAGGACAGGGAAGAAATTGCTGAGATAAAAAAGATGCATTCCCTGATAGAAAAATATAAACTCAGGGGGCAAATCAGATGGATAGCAGCTCAAACCGATCGCTACCGCAATGGAGAGCTATACCGGTGCATTGCTGATACAAAAGGAGCTTTTGTGCAGCCTGCACTTTATGAGGGTTTTGGCCTAACAGTCATTGAGGCAATGAACTGTGGACTGCCTACTTTTGCAACAAACCAAGGTGGCCCAGCGGAGATAATTGTCGACGGAGTCTCCGGCTTCCACATCGATCCGAACAATGGAGACGAATCAAGCAAAAAGATTATTGCTTTCTTTGAGAAATGCAAGTCAGATGGTGGATATTGGAACAAGATGTCAGAAGCTGGTCTTCAGCGAATACATGAATGCTACACTTGGAACATATATGCAAAGAAGGCTCTGAATATGGGATCAATTTATGGATTCTGGAGGCAGTTAACCAAGGACCAAAAACAAGCCAAGATCAGATACATTGAAATGCTTTACTCTCTCTTGCTTAGGAAATTGGTGAAGAACATTTCAATCCCTACTGAAGAATCCTTGCCAGCTCCAACCACCACAGCTCCACCACAGCAGCCGACGCCGGAGCTCCGATCCCGGAGACCAACTGCCACTCAGCCTGAGCCAAGACCAAGGAGTGAAGATGGGGGTTCAGTGGAGCTTGGTCAGAGTGGGAATGCGCTATCACACACCATAAAAAAGATGTGCTTTTTGGCTGGCTCTCTCTTGGTTGCTTACTACATTCTAAAGAGGATTTCTGGAGTAAATCAAGCATATGATGATTTACCATTATAA 6162 44.81 MRELGQVNGEKRAQGIVAWWYEEWSGPKPNHVNFSHYPFTSLSRSALHFLVVIMGRKKRTDAGGESSESQDGGGRGSQRSGERRDGPQQHGGSGYQGGRGWGSQGGRGGQGSGGRGRGTSQHQHYGGPPDYQGRGRGGGGPYQHVARSNYGGGNRGGMGGGGIGGGPSSGGPSRPPVPELHQATSVYQGGMTQPVSSVASSSSHPSSDTSSIDQQFQQVSIQQESSQSQAIQPAPSSKSMRFPLRPGKGSSGIRCIVKANHFFAELPDKDLHQYDVTITPEVTSRVYNRAVMEQLVKLYRVSHLGDRLPAYDGRKSLYTAGPLPFISNEFRITLFDEEDGSGGQRREKEFKVVIKFAARADLHHLGLFLQGRQADAPQEALQVLDIVLRELPTSRYCPVARSFYSPDLGRRQTLGEGLESWRGFYQSIRPTQMGLSLNIDMSSTAFIEPLPVIDFVTQLLNRDVSSRPLSDADRVKIKKALRGVKVEVTHRGNMRRKYRISGLTSQATRELTFPVDERGTMKSVVEYFYETYGFVIQHTQWPCLQVGNQQRPNYLPMEVCKIVEGQRYSKRLNERQITALLKVTCQRPKDREEDIMQTVRHNAYQNDPYAKEFGIKISEKLASVEARILPAPWLKYHDTGREKDCLPQVGQWNMMNKKMFNGGTVNNWMCINFSRYVQDSVTRGFCYELAQMCYISGMAFNPEPVLPPIFARPDHVEKALKTRYHDAMSILQPQGKELDLLIVVLPDNNGSLYGDLKRICETDLGLVSQCCLTKHVFKMSKQYLANVALKINVKVGGRNTVLVDALSRRIPLVSDRPTIIFGADVTHPHPGEDSSPSIAAVVASQDWPEVTKYAGLVSAQAHRQELIQDLFKTWQDPVRGTVTGGMIKELLISFRRATGQKPQRIIFYRDGVSEGQFYQVLLHELDAIRKACASLEPNYQPPVTFVVVQKRHHTRLFANNHSDRHAVDKSGNILPGTVVDSKICHPTEFDFYLCSHAGIQGTSRPAHYHVLWDENKFTADGLQTLTNNLCYTYARCTRSVSIVPPAYYAHLAAFRARFYMEPETSDSGSISSEAAAGRGGVGARSTRAPGLNAAVRPLPALKENVKRAAAVMELKEGKNKSHPPIPITRQKQGNHHFIIKLKTVSEDNKKEGCVIIAMEAASLMRLDTPISDSLNNALRRSHNSMKKCFARFVENGKRLMKCQDLMKDVEITIEDKRERSHVLEGFLGYILSNTQEAAVVPPNIALAVRPSPGFWEFVKVNATSLEVGDLTVSEYLKFKEAIFDENWANDENALEIDFGAIEFSAPRLSLPSSIGNGVNLISKFISSRFGEDKQNVKELVDYLLALHHRGQSLMINKKLNTVSKLQSALFAAQVYLSSLPKDTPYEEFKHKMKGWGFEKGWGSTSERARETMLILSEVLQAPDPAKLELLFSKLPTTLNIVIFSPHGYFGQAGVLGLPDTGGQIVYILDQVRALEEELLHRIELQGLQAKPQILVVTRLIPDARGTKCNVELEPIENTKHSHILRVPFFTQNGVLHQWVSRFDVYPYLERFAKDATSKILEVMDCKPDLVIGNYTDGNLVASLMAKKLGITQGTIAHALEKTKYEDSDAKWKELDPKYHFSCQFTADLISMNATDFIVTSTYQEISGSKTRPGQYESHEAFTMPGLYRAVSGINVFDPKFNIAAPGADQSVYFPFTEKSKRLTNLHPDIEELLYSRENNDEHIGYLADKKKPIIFSMARLDTVKNITGLTEWYGKNRKLRSLVNLVVVAGFFDPSKSKDREEIAEIKKMHSLIEKYKLRGQIRWIAAQTDRYRNGELYRCIADTKGAFVQPALYEGFGLTVIEAMNCGLPTFATNQGGPAEIIVDGVSGFHIDPNNGDESSKKIIAFFEKCKSDGGYWNKMSEAGLQRIHECYTWNIYAKKALNMGSIYGFWRQLTKDQKQAKIRYIEMLYSLLLRKLVKNISIPTEESLPAPTTTAPPQQPTPELRSRRPTATQPEPRPRSEDGGSVELGQSGNALSHTIKKMCFLAGSLLVAYYILKRISGVNQAYDDLPL 2053
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32412143 32426297 + CePI673135_01g017980.1 Cec01g1798 195015
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1798 2053 SUPERFAMILY Ribonuclease H-like 735 1061 IPR012337 -
Cec01g1798 2053 ProSiteProfiles PAZ domain profile. 451 564 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Cec01g1798 2053 Pfam Argonaute linker 1 domain 399 448 IPR014811 -
Cec01g1798 2053 FunFam Protein argonaute-2 443 569 - -
Cec01g1798 2053 FunFam Sucrose synthase 1307 1436 - -
Cec01g1798 2053 Pfam PAZ domain 453 580 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Cec01g1798 2053 Pfam Mid domain of argonaute 647 722 IPR032473 -
Cec01g1798 2053 Gene3D - 1169 1306 - -
Cec01g1798 2053 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 1456 1924 - -
Cec01g1798 2053 FunFam Argonaute 10 628 803 - -
Cec01g1798 2053 Gene3D Glycogen Phosphorylase B; 1688 1915 - -
Cec01g1798 2053 Pfam N-terminal domain of argonaute 255 388 IPR032474 -
Cec01g1798 2053 FunFam Sucrose synthase 1169 1306 - -
Cec01g1798 2053 Pfam Glycine-rich region of argonaut 126 236 IPR024357 -
Cec01g1798 2053 Gene3D Glycogen Phosphorylase B; 1441 1958 - -
Cec01g1798 2053 SMART Piwi_a_2 740 1061 IPR003165 GO:0003676(InterPro)
Cec01g1798 2053 MobiDBLite consensus disorder prediction 1968 2011 - -
Cec01g1798 2053 Gene3D paz domain 443 568 - -
Cec01g1798 2053 MobiDBLite consensus disorder prediction 1065 1088 - -
Cec01g1798 2053 CDD PAZ_argonaute_like 449 563 - -
Cec01g1798 2053 PANTHER - 1163 1967 IPR012820 GO:0005985(InterPro)|GO:0016157(PANTHER)|GO:0016157(InterPro)
Cec01g1798 2053 FunFam Sucrose synthase 1688 1915 - -
Cec01g1798 2053 SUPERFAMILY PAZ domain 257 606 IPR036085 GO:0005515(InterPro)
Cec01g1798 2053 Pfam Argonaute linker 2 domain 590 636 IPR032472 -
Cec01g1798 2053 SMART PAZ_2_a_3 454 586 IPR003100 GO:0003723(InterPro)|GO:0005515(InterPro)
Cec01g1798 2053 Gene3D - 1307 1436 - -
Cec01g1798 2053 Gene3D - 628 803 - -
Cec01g1798 2053 NCBIfam sucrose synthase 1183 1962 IPR012820 GO:0005985(InterPro)|GO:0016157(InterPro)
Cec01g1798 2053 FunFam protein argonaute 10-like 809 1112 - -
Cec01g1798 2053 SMART DUF1785_2 397 449 IPR014811 -
Cec01g1798 2053 MobiDBLite consensus disorder prediction 59 180 - -
Cec01g1798 2053 Pfam Glycosyl transferases group 1 1725 1890 IPR001296 GO:0016757(InterPro)
Cec01g1798 2053 Pfam Piwi domain 741 1060 IPR003165 GO:0003676(InterPro)
Cec01g1798 2053 Pfam Sucrose synthase 1170 1714 IPR000368 GO:0005985(InterPro)|GO:0016157(InterPro)
Cec01g1798 2053 CDD Piwi_ago-like 608 1060 IPR045246 -
Cec01g1798 2053 MobiDBLite consensus disorder prediction 192 236 - -
Cec01g1798 2053 Gene3D - 809 1109 IPR036397 GO:0003676(InterPro)
Cec01g1798 2053 MobiDBLite consensus disorder prediction 192 246 - -
Cec01g1798 2053 ProSiteProfiles Piwi domain profile. 740 1061 IPR003165 GO:0003676(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0858 Cec-Chr1:9807327 Cec01g1798 Cec-Chr1:32412143 0.00E+00 dispersed
Cec01g1372 Cec-Chr1:27527376 Cec01g1798 Cec-Chr1:32412143 1.80E-300 dispersed
Cec01g1798 Cec-Chr1:32412143 Cec05g0565 Cec-Chr5:4576576 0.00E+00 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1798 K11593 - csv:101212130 1841.62