Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1809 ATGCCGATGGCTGGGGGAGCGAGTACGATCAATGAGCGTCAATTACACAAACACTGTGGACGATACGAAGGAACACTGACGGAAGGCTCCTTTGTTGGGTGGACAATAAAAAAAGCTAGCGAGTGTTCAAAGTCTTCGCAGTCGCTGCGTTGCCTTGGCGTCCGCCTCTCTCTCACTCTCAGGTCTAGATACTTAGGCATGGCTGCTTTTGAAAAAGACGATATACCAATGCTATCAAACATCGATCCACCAATGTTTGATGAGCAAGTGGATTCTTATTTTCCTTCATATGCATCCTTGGGCCGGAGTTCATCACTATCAATTCCAGCAACTTCTTCTGGCATGTATGGTAGTGAAGCAATTCTTGTTGGTCATACTGGTCCCCTACGAATTGAAAGAAGTTCATTCATGGTGAGTGGTTCAAAATATACCGGCAGTAAGCCCGAAAAACTTTCACAGTCAAAGCCAGGAGTGACTGAAAGCAAAACGGCAGAGCTGTTGGCAGAAAAAATCCCTTCCTTCAAGGCAACAGATGAGTCTGATTGGTCCATTCATAACTATGCTGGTAGAAATGAACACTTAATAAGGTCTGGCCAGCTGGGATTATGCAATGATCCTTTCTGTATTACTTGCCCAACATATAATTTCAAAGCATCACAACAGAAAAGCTCAAGAATTTCAGGCATATTTGACGCCAAGTTTCATAACGATCTCTATGGAGGAGGGAAAGGTTGGGCGGGAAGCTTTCAGTCATTCTGGTGCTTGTTGCTTCCATATATTCCAGGAGTAATGAATCCTCATGCAAAAGTTGTTCAGCAGTGGAACAAGTTTTTTGTCATTTCTTGCTTAGTGGCAATCTTCTTGGACCCATTATTTTTCTTCTTGCTGTCTGTCCAATATAATAATAAGTGCATTGTTATTGATTGGTCTTTGACCACAGCATTGGTGGTTTTCCGGAGCCTGACTGACTTTATCTATTTCCTACACATGCTTCTTCAGTTTAGGTTGGCCTACGTGGCACCAGAATCCAGAGTTGTTGGTGCTGGCGAATTGGTTGACCATCCGAAGAAAATTGCTATGAATTACATTAAAGGAAAATTTTTTGTAGATTTGCTTGTTGTTTTGCCGCTGCCTCAGATTATAGTTTTTCTAATCCTGCCAAAGTCTTTGGGGTCATCTGGAGCAAATTATGCCAAAAATCTATTACGCACTGCAGTTACTGTGCAATATATTCCCAGACTGTATAGATTTCTACCTCTTCTTGCTGGCCAGTCTCCAAGTGGCTTTGTATTTGAGACAGCATGGGCAAATTTTGTCATCAATCTTCTGACCTTTATGTTGGCTGGTCATGTTGTTGGGTCTTTCTGGTATCTCCTTGGGCTTCAGGGGGTGAATCGATGTTTTCGAGAGGCCTGCACTAACACTGGAAATGAGAGCTGCTTGGAATATATAGATTGTGGGCATGGGAATGAAGCTGGGAGTCAGATTCAGGATCCACAGCGGGATTCATGGAAAAATAATGAGAATGCTACGGCATGTTTTGCCAAAGAAGGTTTCAATTATGGAATCTATCTTCAGGCTGTAAACCTTACTACAGAAAATAATATAATCACGAGATATACTTACTCCTTATTTTGGGGATTCCAGCAAATCAGTACTCTGGCCGGGAACCAAGTTCCAAGCTATTATGTCTATGAAGTCCTTTTTACTATGGCTATTATTGGGCTTGGTCTATTGCTGTTTGCTCTTCTCATCGGGAATATGCAGAACTTTCTCCAGGCTCTTGGAAGAAGGAGGTTAGAAATGTCACTAAGACGTCGTGATGTTGAGCAATGGATGGAGCATCGTCGCTTACCAGAGAATTTAAGAAGGCAAGTACGACAGGCTGAAAGATACAACTGGGCTTCTACAAGAGGCGTAAATGAAGAGAGGATTTTCGAAAATTTGCCTGAGGACCTACAAAGAAACATAAGACGACATCTCTTTAGATTTGTTAACAAGGTTCGCATTTTTGCACTGATGGACTATGAGCCTATTTTAGACGCAATACGTGAGAGACTGCGGCAGAAGACATACATAGAAGGAAGTGAAGTTTTTTCTGCTGGAGATATCATTGAGAAGATGGTTTTCATCGTACGTGGGAAAATGGAGAGCCGTGTAGATGGAAATGGGATTGTGGTTCCCTTATCTGAAGGAGATGTCTGCGGCGAGGAACTTCTAGCATGGTGTCTTGAGCATTCCTCCATAAACAAAGATATGAAGCGGCATCAAGTTCCAGCACCGAGATTGGTCAGCAATCGGACAGTAAAATGCTTAAGTAATGTTGAAGCATTTTCTCTCCGGGTTGCAGACCTTGAAGAAGTGACTAGTATGTTTTCTAGATTCTTGCGAAATCCACGTGTTCAAGGAGCCATAAGGTACGAATCACCCTACTGGAGGTACCTAGCGGCAACGCGCATTCAAGTAGCTTGGAGATACAGGAAAAGACGTCTATCTCGAGTTCAAACATCTCAATCTAACTAA 2523 42.65 MPMAGGASTINERQLHKHCGRYEGTLTEGSFVGWTIKKASECSKSSQSLRCLGVRLSLTLRSRYLGMAAFEKDDIPMLSNIDPPMFDEQVDSYFPSYASLGRSSSLSIPATSSGMYGSEAILVGHTGPLRIERSSFMVSGSKYTGSKPEKLSQSKPGVTESKTAELLAEKIPSFKATDESDWSIHNYAGRNEHLIRSGQLGLCNDPFCITCPTYNFKASQQKSSRISGIFDAKFHNDLYGGGKGWAGSFQSFWCLLLPYIPGVMNPHAKVVQQWNKFFVISCLVAIFLDPLFFFLLSVQYNNKCIVIDWSLTTALVVFRSLTDFIYFLHMLLQFRLAYVAPESRVVGAGELVDHPKKIAMNYIKGKFFVDLLVVLPLPQIIVFLILPKSLGSSGANYAKNLLRTAVTVQYIPRLYRFLPLLAGQSPSGFVFETAWANFVINLLTFMLAGHVVGSFWYLLGLQGVNRCFREACTNTGNESCLEYIDCGHGNEAGSQIQDPQRDSWKNNENATACFAKEGFNYGIYLQAVNLTTENNIITRYTYSLFWGFQQISTLAGNQVPSYYVYEVLFTMAIIGLGLLLFALLIGNMQNFLQALGRRRLEMSLRRRDVEQWMEHRRLPENLRRQVRQAERYNWASTRGVNEERIFENLPEDLQRNIRRHLFRFVNKVRIFALMDYEPILDAIRERLRQKTYIEGSEVFSAGDIIEKMVFIVRGKMESRVDGNGIVVPLSEGDVCGEELLAWCLEHSSINKDMKRHQVPAPRLVSNRTVKCLSNVEAFSLRVADLEEVTSMFSRFLRNPRVQGAIRYESPYWRYLAATRIQVAWRYRKRRLSRVQTSQSN 840
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32507864 32526997 + CePI673135_01g018090.1 Cec01g1809 195026
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1809 840 Gene3D - 255 595 - -
Cec01g1809 840 Gene3D Jelly Rolls 668 794 IPR014710 -
Cec01g1809 840 PANTHER CYCLIC NUCLEOTIDE-GATED ION CHANNEL 15-RELATED-RELATED 260 833 - -
Cec01g1809 840 Pfam Ion transport protein 275 596 IPR005821 GO:0005216(InterPro)|GO:0006811(InterPro)|GO:0016020(InterPro)|GO:0055085(InterPro)
Cec01g1809 840 SUPERFAMILY Voltage-gated potassium channels 269 593 - -
Cec01g1809 840 SUPERFAMILY cAMP-binding domain-like 598 796 IPR018490 -
Cec01g1809 840 Gene3D Helix hairpin bin 596 662 - -
Cec01g1809 840 ProSiteProfiles cAMP/cGMP binding motif profile. 683 740 IPR000595 -
Cec01g1809 840 CDD CAP_ED 670 788 IPR000595 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g1809 Cec-Chr1:32507864 Cec06g1481 Cec-Chr6:28330910 7.50E-114 dispersed
Cec01g1809 Cec-Chr1:32507864 Cec01g0049 Cec-Chr1:410925 1.20E-106 transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1809 K05391 - csv:101215903 1422.53