Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1812 ATGCAAGGCGACGCGAGGAATCAATTTCCATTTGATTTGACCTCACCTCTACAGTTTTCCTTTCATTTTCAATGGCTTCCAGTTGTCAACAGATGTGGAGAACAAGCACTCATTTCTATACAATATGATAATACTTTCATTTTTTATTTTAGAAACAACATTGTGGTGCCACATCATTTCTTCTCCACTCAACATCTGTCCATCACCTTCATGTTTTCTCTCAATAATGAATGCTTTATTTCAATTACTTTTCCATTTCTTCGTGTCGTCATATTACTGCAGACCTTTGCCTCAAAGTTGTATGGATCAAAGTCTTGTGAAGACTGCCCTACATTGAGGAAGGTGGTGGGACCCGAAACCGACGTGACGTGTCCTTTGGTTGCTTCAGGGGAGGATGTAGTTAAACTTGAACTTAAATTTCAACCCTTCTGGCATCACCAAAATATGGTTTTGACGACAGTTGCAGACTCTGGAGATTCTGTGAACTGCACTTTTGGTTCCAGATATCTCCGCTCTCCTCCTCCCAAGTTCAAACTGGGAGAGCAATCTATTCCAAAGGATGCAGCGTACCAGATCATACACGATGAGTTGATGCTGGATGGGACTCCCAGGCTGAACTTGGCTTCTTTTGTAACAACTTGGATGGAGCCAGAGTGTGATAACCTTATCATGGCTTCTCTCAACAAGAACTATGTTGACATGGATGAGTACCCAGTCACCACTGAGCTACAGAATCGCTGTGTCAATATGATTGCTCGCCTCTTTCATGCCCCCATCGGAGATCAAGAAGCTGCAGTTGGTGTGGGGACTGTCGGATCATCAGAGGCTATAATGCTGGCGGGTCTTGCTTTTAAGAGGAAATGGCAGCACAGAAGAAAATCTCAAGGCAAACCCTATGATAAACCCAACATAGTCACTGGTGCTAATGTCCAGGTGTGCTGGGAGAAGTTTGCAAGGTACTTTGAGGTTGAGCTGAAGGAGGTGAAGCTTTCTGAAGGGTATTATGTGATGGATCCAGTGAAGGCTGTTGAACTGGTTGATGAGAATACTATTTGTGTTGCAGCAATTCTGGGGTCAACTCTGACTGGAGAGTTTGAGGATGTAAAGCTCCTCAATGAACTTCTCTCTAAGAAGAATAAGGAAACAGGTTGGGACACCCCAATTCATGTTGATGCAGCCAGTGGAGGGTTTATTGCCCCATTCCTTTATCCCGATCTCGACTGGGATTTTCGGTTGCCTTTAGTGAAGAGCATCAATGTCAGTGGTCACAAGTATGGGCTTGTCTACCCTGGTGTAGGATGGGTTGTTTGGAGGAGTAAAGAGGATCTGCCTGACGAGCTTGTCTTCCACATTAACTATCTTGGTTCTGATCAACCCACCTTTACTCTCAACTTCTCAAAAGGTTCTAGCCAAATCATCGCTCAGTATTATCAGTTTATACGGCTTGGCTTTGAGGGATACAAAAACGTGATGGAGAACTGCAGGGAGAATGCGAGAGTGCTGAGAGAGGGAATAGAGAAGATGGGAAGGTTTGAGGTTGTTTCCAAGGATGTTGGAGTGCCCCTGGTAGCCTTCACTCTCAAAGACAGCAGCAAACACACCGTGTTCGAGATATCGGAGAACCTGAGGAGGTTTGGATGGATTGTGCCAGCTTACACGATGCCAGCGGACGCTCAGCACATAGCGGTGCTGCGCGTGGTGATTAGGGAGGACTTCAGCCGCAGTTTGGCAGAGAGACTGATCTCGGACATCGACAGAGTCTTGAAGGAAGTTGAGGCACTGCCAACTCGGGTGGCTGTGAAAGCAGCAGAAGTGAAAGCGGGCGTTGAAGATCGTGTGAGAGTTACAAAGCATGTGAAGAAGAGTGAACGGGAGATTGAGGAGGAAGTAACTTCATATTGGAGACGGCTTGTGGATGGCAGGAGAACTGTTTGCTTCCTTGCTGGTGCAGTCAGTGTTTGTGACTTTGTTCGTGTCGTCGGCAACTTCTCTGCTCAAGCCTCAAGCGATTCTATTGTCACACTGAAGAATGGACGCATTAACTCTGAGGAGAAAGTGAAATCTTCAATATTAGACAAGGATGCGGTGCATCGGGTTATCAGCATTATGCTTGCAGCTGATGAAGTGGGAGAAGAAAGTCTCACTACCTCTACCAGTACACATGCTCTTTGCATCATCAACGCTTTTGATATCTCCAAGTTTCGTTATGATCCCATCAAAAAGATCTTCCATCTGCATACAGGAAGCCTTCCAATTCATGGGGATGCTCCTGCTAAAGCTGCTTTATATAGAGATAGGTTTCTTCTGCTTTCCCAGAGGCTCTCCCGAGATCAGCATTTCTCCAAACCCGCTTTTGACACTGGCATGTCTCATTTTGGAAGTTGTGAGATTTCTCCTATTCAATCTTTGGTGGGGCAAACAGGGAGAAAATGGGTCATGGGAGTGATCTCTCAAATGGAGGACGGCCACTTTTACTTGGAGGACCTTACTGCGTCTGTGGAAATTAATTTATCTAATCACAAGATAACTACAGGTCTATTTACAGAGAACACCATTGTTGTAGCAGAAGGAGAGATGCACGTGGAGGGTATTTTTCAGGTTGTTACATGTGGATTTCCTCCACTAGAGGAGAGGGACAAGTCTCTTAAATTGCTAGCAGGCCAGGACTTCTTTGGAGGTGGTGCTCTACCAAAAGAGGAGACTCTCAGGCTTGCAGATCTGGAGAAGAAAGCTGTTAATGATATGTTTGTCATACTTTCTGACATTTGGTTGGATAGTGAAGAGGCCATGGGAAAACTGGAGACCATACTTGATGGTTTCGAGAATGTGGAAGTGGTTCCTTCCTTATTTGTTTTGATGGGAAATTTTTGTTCCCGTCCATGCAATCTTGCCTTTAATTCTTTCTCAAATCTCAGACTACAGTTTGGTAAGTTAGGAAAAATGATAGCAGCTCATCCAAGATTACAAGAGCATAGCAAGTTTCTTTTTATTCCTGGTCCAGATGATGCAGGACCATCAACCGTTCTACCTAGGTGTGCTTTGCCGAAGTATTTAACCGAAGAGCTTCAGATGCACGTCCCAAATGCCATTTTCTCAAGTAACCCTTGCAGGGTCAGATTCTACACCCAGGAAATTGTATTTTTCCGACAAGACCTTCTCTATAGAATGCGCCGTTCCTGTCTCATACCACCTTCCACAGAAGAAACAAGTGATCCTTTCGAGCATCTTGTTGCGACTATGACTCATCAAAGTCATCTCTGCCCTCTTCCTCTGGTTATTCAACCAATTATCTGGAATTACGACCACTGTCTTCATCTATACCCTACTCCTCATGTGATAGTTTTGGGGGATAGAAGTAAGCAACAAGCATTCAAATACACAGGAATCACTTGCTTTAATCCTGGTTCCTTCACAAATGATAGCACTTTTGTGGCATATCGTCCTTGCAATCAAGAAGTTGAACTGTCTGCCTTGTTAACCGAAAGGAGCGTTAGAAGAATGAGGGAAATGTTTTCAACATCCAACTTTGGTCTAGGATCAATCAAGATCAATAGGAGGCGTGTGGCCTGGGACGAAGCCCAAGCCACGAGGCTCACCCTGGGTTCGAGCCTAGATCGAGCGCCGAGGCTGAGGCGGACCCGACCAACATCTTTTCCAATCGAGGCTGCACGTGAGAAGGAGGCCCGAGATTTGATCCTAGCTTGCTAG 3708 45.23 MQGDARNQFPFDLTSPLQFSFHFQWLPVVNRCGEQALISIQYDNTFIFYFRNNIVVPHHFFSTQHLSITFMFSLNNECFISITFPFLRVVILLQTFASKLYGSKSCEDCPTLRKVVGPETDVTCPLVASGEDVVKLELKFQPFWHHQNMVLTTVADSGDSVNCTFGSRYLRSPPPKFKLGEQSIPKDAAYQIIHDELMLDGTPRLNLASFVTTWMEPECDNLIMASLNKNYVDMDEYPVTTELQNRCVNMIARLFHAPIGDQEAAVGVGTVGSSEAIMLAGLAFKRKWQHRRKSQGKPYDKPNIVTGANVQVCWEKFARYFEVELKEVKLSEGYYVMDPVKAVELVDENTICVAAILGSTLTGEFEDVKLLNELLSKKNKETGWDTPIHVDAASGGFIAPFLYPDLDWDFRLPLVKSINVSGHKYGLVYPGVGWVVWRSKEDLPDELVFHINYLGSDQPTFTLNFSKGSSQIIAQYYQFIRLGFEGYKNVMENCRENARVLREGIEKMGRFEVVSKDVGVPLVAFTLKDSSKHTVFEISENLRRFGWIVPAYTMPADAQHIAVLRVVIREDFSRSLAERLISDIDRVLKEVEALPTRVAVKAAEVKAGVEDRVRVTKHVKKSEREIEEEVTSYWRRLVDGRRTVCFLAGAVSVCDFVRVVGNFSAQASSDSIVTLKNGRINSEEKVKSSILDKDAVHRVISIMLAADEVGEESLTTSTSTHALCIINAFDISKFRYDPIKKIFHLHTGSLPIHGDAPAKAALYRDRFLLLSQRLSRDQHFSKPAFDTGMSHFGSCEISPIQSLVGQTGRKWVMGVISQMEDGHFYLEDLTASVEINLSNHKITTGLFTENTIVVAEGEMHVEGIFQVVTCGFPPLEERDKSLKLLAGQDFFGGGALPKEETLRLADLEKKAVNDMFVILSDIWLDSEEAMGKLETILDGFENVEVVPSLFVLMGNFCSRPCNLAFNSFSNLRLQFGKLGKMIAAHPRLQEHSKFLFIPGPDDAGPSTVLPRCALPKYLTEELQMHVPNAIFSSNPCRVRFYTQEIVFFRQDLLYRMRRSCLIPPSTEETSDPFEHLVATMTHQSHLCPLPLVIQPIIWNYDHCLHLYPTPHVIVLGDRSKQQAFKYTGITCFNPGSFTNDSTFVAYRPCNQEVELSALLTERSVRRMREMFSTSNFGLGSIKINRRRVAWDEAQATRLTLGSSLDRAPRLRRTRPTSFPIEAAREKEARDLILAC 1235
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32552906 32566098 + CePI673135_01g018120.1 Cec01g1812 195029
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1812 1235 Pfam Pyridoxal-dependent decarboxylase conserved domain 184 528 IPR002129 GO:0016830(InterPro)|GO:0019752(InterPro)|GO:0030170(InterPro)
Cec01g1812 1235 FunFam Glutamate decarboxylase 213 507 - -
Cec01g1812 1235 Pfam DNA polymerase alpha/epsilon subunit B 916 1121 IPR007185 GO:0003677(InterPro)|GO:0006260(InterPro)
Cec01g1812 1235 PANTHER GLUTAMATE DECARBOXYLASE 149 640 IPR010107 GO:0004351(PANTHER)|GO:0004351(InterPro)|GO:0005829(PANTHER)|GO:0006536(InterPro)|GO:0006538(PANTHER)|GO:0030170(InterPro)
Cec01g1812 1235 Gene3D - 213 507 IPR015421 -
Cec01g1812 1235 NCBIfam glutamate decarboxylase 164 591 IPR010107 GO:0004351(InterPro)|GO:0006536(InterPro)|GO:0030170(InterPro)
Cec01g1812 1235 Gene3D - 508 595 - -
Cec01g1812 1235 Gene3D - 149 212 - -
Cec01g1812 1235 CDD DOPA_deC_like 206 586 - -
Cec01g1812 1235 FunFam Glutamate decarboxylase 153 212 - -
Cec01g1812 1235 FunFam Glutamate decarboxylase 508 595 - -
Cec01g1812 1235 SUPERFAMILY PLP-dependent transferases 163 592 IPR015424 -
Cec01g1812 1235 Gene3D - 925 1162 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0872 Cec-Chr1:10033264 Cec01g1812 Cec-Chr1:32552906 2.40E-229 dispersed
Cec01g1812 Cec-Chr1:32552906 Cec02g1883 Cec-Chr2:36621036 5.60E-17 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1812 K01580 - csv:101210903 946.036