Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec01g1826 ATGAAGTATCGTTATGCGATGGTTTGCTCATCCAACCAGAATCGAAGCATGGAGGCTCACTCTATCCTCAAAAGCAAGGGCTTCAACGTTTCATCCTATGGAACTGGGGCTCACGTGAAGCTTCCCGGACCTTCTCTCCGGGAACCCAATGTATACGATTTTGGTACCCCCTACAAGCACATGTTCGATGATCTCCGTCGAAAAGATCCTGAACTATACAAGCGTAACGGCATTCTGCCCATGCTTAAAAGAAATGCAGCTGTCAAAACGGCTCCTCAACGTTGGCAAGATAATGCAGCAGACGGTTCCTTTGATGTGGTATTTACTTTTGAAGAAAAGGTCTTTGATATGGTCATTGAAGATTTGAACACCCGCGATCATGCACTGATGAAAACTGTACTGATTGTTAATTTGGAGGTAAAAGATAACCACGAGGAGGCAGCTATAGGAGCACGACTTACTTTTGATCTTTGCCAGGAGATTGAACGTACTGAATCATGGGAAGATTCTATAGATGACATCGTGATTACCTTCGAGAAACAACAGAGAAGAAAACTGCTGAATTTTGTTTGGGATGGAAACCGGGTCAGAAAAACAGCTTACCTCTTTCACTGGGACATTAGATTTCAAAACAAAGTCTTCAATGTCACTCTGAGCGAGCTGTGTGTCTATCTCTATGCTAGGGCCTGCACCGATTCTGAACACTTCCTCCATACCGCAGTTAACACTAGGAACGCGGTTCCTATGGTATTCAAAGGCAGGTTTTTCTCGTCCTCCAAGAAGTCCGATTCTTCCAGCCCTGATGGATCCAGTCCCCGGTTCCTTGGTTCTAACTCACCCATCAGATCCGACAAGAAGAAGAACAAATCAGCCGCCAAAGATGAACCCCAGATTTCTAATCCCAGCAGCAGCAGCTTCAGAGGTACCGTTCTGAAAGATGCTTCCCGGAGCAAGGATTGGAAACGAAAAGACAGTCAAGCTCCATTGCCGATCGAGACGCCCTCGAAGTCTGACCCAATTTCCGGCTTGAACTTGGGGCCGAAGGCCAAGAAGTCGGCCGATGTGAAAGACGTGGCGTCATCGGTTTCACCTATTCTGGCATCATCCCTTGGGCTGAATAGGATAAAGACAAGATCAGGCCCGTTGCCGCAGGAGAGCTTCTTGGGTTTCAAAGGTGATAAGGGCTCCTTGGGTTCTAGCAATCTTTCCAGGAATTGCGGCGATGGAAGCTCAGGCTCGAATTCAGGTTCAACATGGTCGGGGTCTTCTAGTGGGGGGAAGAGAGAGGCGGCGAGTCAGAAAAGATTGGGTTTTCAGGAAAATGTTAAAAGCTATATTCGTGATGCTAGCAATTCCGACAATATGCCAATTGGTAATGCACCATCTACTGAGCGGAGTCCAAATTTGTTAGGACAGCCTCGGGTACAGAATGTCGCTTCATCCAATGAAGCTGGATGCTATGAATCATCATGGGGATGTTCTGACGGATTAAGAAATTTAGATTTCTGTACACCAGAGTCCTCTTATGATTGTGAAAATCCCAAGGAGTCTGAATCTCCGCGCTTTCAAGCTATACTGCGAGTCACAAGTGCTCCTCGAAGGAAGTATCCTGCCGATATCAAAAGTTTTTCCCATGAACTAAATTCAAAAGGCGTACGACCTTTCCCACTTTGGAAGTCACGCCGTTTAAATAATTTGGAGGAGATCTTAGTTATGATACGAGCAAAATTTGACAAGGCAAAGGAAGAAGTAAATTCTGACTTGGCTATTTTTGCTGCTGATCTGGTTGGAGTTCTTGAAAAAAATGTCGATGCTCATCCAGAGTGGCAAGAGACAATTGAAGACTTGTTGGTTTTAGCTCGAAGCTGTGCTATGTCATCCCCTGGTGAATTTTGGCTTCAGTGTGAAAGCATTGTTCAGGAATTGGATGATAGACGCCAAGAACTTCCTCCTGGCATGCTGAAACAACTTCATACTCGAATGTTGTTCATTCTCACTAGATGTACCAGGTTGCTGCAGTTCCATAAGGAAAGTGGGTTAGCTGAAGATGAAAATGTTTTTCAGCTTCGTCAGTCGAGAAATCTGCATTCTGCTGATAAACGAATTGCTCCAGCTATGGTAAGGGAAGTGAAAAGTTCTAGTGCAGCCAAGGCTTCTAAGACAACTTCTTCCAGGAAGTCTTACAGCCAGGAGCAGCGTGGTTTGGATTGGAGCAGAGAACATGATATACTGCCTGGGAATAATGTCTCAACATCTCCCGATGATACTTCGAAGAACTTGGTATCTCCTATTGGCAGAGACCGGTTGGCTTCTTGGAAAAGATTGCCTTCTCCAGCAGCAAAAAGTGTGAAAGAACCTACTTTGAAGGATCAGGGTGATAATAAGAAATTTAAATCTTTGAACATGTCAAAAATCAGGATGGGTGTTTCTGAAGCTGATTTGCCTGCTGCTAAGGTTTCTGAGCTTCCTCCGCCCAGAGATTCTCATGACCAACCTACAAAGCACCAACATAAACCTTCTTGGGGTTGGGGTGATCAACCAACTGTATCTGATGAGAGTTCAATAATTTGTCGCATTTGTGAAGAAGAAATTCCAACTGCAAATGTGGAAGATCATTCAAGAATTTGCGCAGTTGCTGATCGATGTGATCAGAAGGGTATAAGTGTTAATGAACGTCTACTCAGAATTGCTGAAACTTTAGAGAAAATGATCGAGTCTTTTACGCAAAAGGATTCTCAGCATGTAGGAAGTCCGGATGTTGCAAAAGTTTCTAATTCTAGCTTGACTGAAGAATCAGATATTTCCCCAAAACACAGTGATTGGTCCCGCAGGGGCTCAGAAGACATGCTAGATTGCTTCCATGAAACTGATAGTTTTATGGATGACTTAAAAGGTTTACCTTCCATGTCTTGTAAAACTCGTTTTGGTCCAAAGTCTGATCAGGGTATGACAACATCATCGGCTGGTAGCATGACTCCTAGATCGCCCTTATTAACACCAAGGACCAGTCAGTTTGACTTGTTTTTGGCAGGGAAAGGTGCTTACTATGAACATGATGATCTTACACAGATCAGTGATCTTGCAGATATTGCACGCTATTCAGCAAATACACCTCTGGGTGATGATTGCTCGATGCAATACCTGCTAACATGCCTTGAGGACTTGAGAGTTGTCATTAACCGCAGGAAGTTTAATGCGCTGACAGTTGACACTTTTGGCACTCGCATTGAAAAGTTAATCCGGGAGAAGTATTTGCAACTTTGTGAGCTGGTGGATGATGAAAAGATTGACATAGCAAGTACTGTTATTGATGAAGATACTCCTCTTGACGATGACATTGTTCGTAGCTTAAGAACTAGTCCAATCCATTCTTCAAAGGACCGTACATCAATTGACGACTTTGAGATTATAAAACCAATCAGCCGTGGGGCATTTGGTCGGGTTTTCTTGGCTAAAAAGAGGACAACGGGGGACCTTTTTGCAATAAAGGTTTTGAAGAAAGCTGATATGATTCGGAAGAATGCCGTTGAAAGTATTTTGGCAGAACGTGATATTTTAATTTCTGTGCGCAACCCTTTTGTGGTCCGCTTTTTCTACTCTTTTACTTGTCGTGACAATTTGTATCTCGTGATGGAGTATTTGAATGGAGGAGACCTTTACTCCTTGTTGAGAAATTTGGGCTGCTTAGATGAAGATGTTGCTCGCGTATATATCGCAGAAGTTGTTCTTGCTTTGGAGTATCTGCATTCACTTGGGGTAGTTCATCGGGACTTAAAGCCTGATAATTTATTAATAGCACATGATGGTCATATTAAGCTGACAGATTTTGGGCTTTCCAAGGTTGGTCTAATCAACAGTACTGATGATTTGTCTGGACCAGCTGTTAGCGGGACCACTCTTCTTGGCTATGATGAACCTACAATGTCTGCTTCTGAGCATCAACAAGAAAGACGGAAAAAGCGTTCTGCTGTTGGCACACCAGATTATTTGGCACCAGAGATACTATTGGGAACCGGACACGGGCTCAACGACTCCCTTAATGACACCTCAACATCTGTCACACCAGGATTCGAGTTAAAGCTTAGATAG 4089 43.8 MKYRYAMVCSSNQNRSMEAHSILKSKGFNVSSYGTGAHVKLPGPSLREPNVYDFGTPYKHMFDDLRRKDPELYKRNGILPMLKRNAAVKTAPQRWQDNAADGSFDVVFTFEEKVFDMVIEDLNTRDHALMKTVLIVNLEVKDNHEEAAIGARLTFDLCQEIERTESWEDSIDDIVITFEKQQRRKLLNFVWDGNRVRKTAYLFHWDIRFQNKVFNVTLSELCVYLYARACTDSEHFLHTAVNTRNAVPMVFKGRFFSSSKKSDSSSPDGSSPRFLGSNSPIRSDKKKNKSAAKDEPQISNPSSSSFRGTVLKDASRSKDWKRKDSQAPLPIETPSKSDPISGLNLGPKAKKSADVKDVASSVSPILASSLGLNRIKTRSGPLPQESFLGFKGDKGSLGSSNLSRNCGDGSSGSNSGSTWSGSSSGGKREAASQKRLGFQENVKSYIRDASNSDNMPIGNAPSTERSPNLLGQPRVQNVASSNEAGCYESSWGCSDGLRNLDFCTPESSYDCENPKESESPRFQAILRVTSAPRRKYPADIKSFSHELNSKGVRPFPLWKSRRLNNLEEILVMIRAKFDKAKEEVNSDLAIFAADLVGVLEKNVDAHPEWQETIEDLLVLARSCAMSSPGEFWLQCESIVQELDDRRQELPPGMLKQLHTRMLFILTRCTRLLQFHKESGLAEDENVFQLRQSRNLHSADKRIAPAMVREVKSSSAAKASKTTSSRKSYSQEQRGLDWSREHDILPGNNVSTSPDDTSKNLVSPIGRDRLASWKRLPSPAAKSVKEPTLKDQGDNKKFKSLNMSKIRMGVSEADLPAAKVSELPPPRDSHDQPTKHQHKPSWGWGDQPTVSDESSIICRICEEEIPTANVEDHSRICAVADRCDQKGISVNERLLRIAETLEKMIESFTQKDSQHVGSPDVAKVSNSSLTEESDISPKHSDWSRRGSEDMLDCFHETDSFMDDLKGLPSMSCKTRFGPKSDQGMTTSSAGSMTPRSPLLTPRTSQFDLFLAGKGAYYEHDDLTQISDLADIARYSANTPLGDDCSMQYLLTCLEDLRVVINRRKFNALTVDTFGTRIEKLIREKYLQLCELVDDEKIDIASTVIDEDTPLDDDIVRSLRTSPIHSSKDRTSIDDFEIIKPISRGAFGRVFLAKKRTTGDLFAIKVLKKADMIRKNAVESILAERDILISVRNPFVVRFFYSFTCRDNLYLVMEYLNGGDLYSLLRNLGCLDEDVARVYIAEVVLALEYLHSLGVVHRDLKPDNLLIAHDGHIKLTDFGLSKVGLINSTDDLSGPAVSGTTLLGYDEPTMSASEHQQERRKKRSAVGTPDYLAPEILLGTGHGLNDSLNDTSTSVTPGFELKLR 1362
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
1 32714375 32741010 + CePI673135_01g018260.1 Cec01g1826 195043
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec01g1826 1362 FunFam AGC protein kinase 1214 1285 - -
Cec01g1826 1362 MobiDBLite consensus disorder prediction 294 311 - -
Cec01g1826 1362 MobiDBLite consensus disorder prediction 258 278 - -
Cec01g1826 1362 MobiDBLite consensus disorder prediction 1342 1356 - -
Cec01g1826 1362 MobiDBLite consensus disorder prediction 398 429 - -
Cec01g1826 1362 MobiDBLite consensus disorder prediction 975 996 - -
Cec01g1826 1362 Gene3D - 1 70 - -
Cec01g1826 1362 Gene3D - 71 191 - -
Cec01g1826 1362 ProSitePatterns Serine/Threonine protein kinases active-site signature. 1253 1265 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec01g1826 1362 MobiDBLite consensus disorder prediction 398 470 - -
Cec01g1826 1362 MobiDBLite consensus disorder prediction 312 326 - -
Cec01g1826 1362 MobiDBLite consensus disorder prediction 444 470 - -
Cec01g1826 1362 MobiDBLite consensus disorder prediction 786 800 - -
Cec01g1826 1362 MobiDBLite consensus disorder prediction 1341 1362 - -
Cec01g1826 1362 MobiDBLite consensus disorder prediction 258 360 - -
Cec01g1826 1362 SMART serkin_6 1134 1362 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1826 1362 MobiDBLite consensus disorder prediction 909 932 - -
Cec01g1826 1362 Pfam Protein kinase domain 1135 1340 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1826 1362 CDD STKc_MAST_like 1140 1341 - -
Cec01g1826 1362 MobiDBLite consensus disorder prediction 908 942 - -
Cec01g1826 1362 MobiDBLite consensus disorder prediction 1303 1323 - -
Cec01g1826 1362 Pfam Ssu72-like protein 4 188 IPR006811 GO:0004721(InterPro)|GO:0005634(InterPro)|GO:0006397(InterPro)
Cec01g1826 1362 MobiDBLite consensus disorder prediction 700 848 - -
Cec01g1826 1362 FunFam RNA polymerase II subunit A C-terminal domain phosphatase 1 70 - -
Cec01g1826 1362 ProSiteProfiles Protein kinase domain profile. 1134 1362 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec01g1826 1362 PANTHER SERINE/THREONINE-PROTEIN KINASE 843 1341 IPR050236 GO:0004674(PANTHER)|GO:0018105(PANTHER)|GO:0035556(PANTHER)
Cec01g1826 1362 SUPERFAMILY Protein kinase-like (PK-like) 1119 1341 IPR011009 -
Cec01g1826 1362 FunFam probable serine/threonine protein kinase IREH1 1132 1221 - -
Cec01g1826 1362 MobiDBLite consensus disorder prediction 714 731 - -
Cec01g1826 1362 Coils Coil 563 583 - -
Cec01g1826 1362 FunFam RNA polymerase II subunit A 71 191 - -
Cec01g1826 1362 Gene3D Transferase(Phosphotransferase) domain 1 1214 1341 - -
Cec01g1826 1362 MobiDBLite consensus disorder prediction 744 759 - -
Cec01g1826 1362 Coils Coil 890 910 - -
Cec01g1826 1362 Gene3D Phosphorylase Kinase; domain 1 1131 1213 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0523 Cec-Chr1:5345246 Cec01g1826 Cec-Chr1:32714375 2.30E-238 dispersed
Cec01g1826 Cec-Chr1:32714375 Cec04g2253 Cec-Chr4:40163024 2.40E-45 dispersed
Cec01g1826 Cec-Chr1:32714375 Cec05g1987 Cec-Chr5:31886686 7.00E-45 transposed
       

Transcription factors information

Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71711 PF00069 Pkinase 2.90E-45 CL0016 Cec PK
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec01g1826 K08789 - csv:101214945 1986.46