Gene search
Sequence information

Select | Gene | Cds | Cds_length | GC_content | Pep | Pep_length |
---|---|---|---|---|---|---|
Cec02g0011 | ATGAGTGTAGAAAATAAATTCCCTAAAGCAGGAGCATTAATGAATAAGGCAGCAGGCAGAGTGTTGAAACTTGTGGGTGTGGGCATTGGGGGAGGAGGTGGGGAGCAGGTAAGTAATTGTAGGGTGGAAGCTCGTAAAGAAGATCCGGCAGAGACCGCTGAGCCCTGGAAGAAGAGCGACAGACGGAGTATAGAATTAGAAGAGAGCTTGGAGAAAACGAGAGGAGAGGGCGGTTCTCTTCTCACATTTTTTGCATGGCTTGGCTCCGCTCGGCTTGGTCCGGCTCCGCCTCCTATTATCGTCTCAGTCTCAACGCGACTCTCTCTCGTTACTATGATACGTTACATTACTGTAGTGGGAAGACATGCAAATAAAGCTATTGTTTCAAAAATTTTGCCTAGAGAAGATATGCCTTATTTGCAAAATGGAAGACCGGTTGATATGGTTTTCAATCCATTAGGAGTCCCCTCACAAATGAATGGAAGGAGAAGGGCAAAGCAAGCAGTGGTTTTATCGACTCGTTATGGGAATATGGATAGTGCATTCATGTCCAGTGGAGAAGTGGAAGCTTCTTTGACTCTTTTAAAATCAATGATGTTAAAAGCAGAGGCTCAAAGGTGCCATGGGAACACAGATTCTAATGCTCATTCTCATTCGGATTCCACCATCAACTGGCAGCAGAAGGAAGCAGCAGCTCATGCTCAGACACCACCTTATTCTCTCTCTCATTGCTTTTCTCATGATTTTTCACAATCCCACCTTGCATTTTCATTCTCAATGCTTTCTTTTGCAGCCTCAGAAGCCATGCCTCTTTCTAAAGGAGGTACTCCTATGTTTTCAATGCTTTATAGATGGAACCCCTTAAGACTGATTATTCAGGGGCTGCTACTGTTCTCATTGTTGAGGTCGAATCATGCATCAACGGATCCAGATGTGGAAGGAGAAGCTTTGGTTGACTTGTTAGGGGCACTGAATGATTCCAATCATCAGATTACTGATTGGAATTATCATCTTGTAAGCCCTTGCTTTAGTTGGTCGCATATTACCTGCCGAAATGGAAATGTCATATCCTTGAGCTTGGGTTCAGTAGGATTTTCAGGATCACTTTCTCCCTCAATTACCAAACTGAAGTATTTGGCTAGCCTGGATTTGCAGAACAATAATATAGCTGGTGTTATACCAGATTATCTAGCTAACATGACCCACCTACAGAATTTGAATCTTGCTAATAATAACTTCAATGGCCCTATACCTGCAGCTTGGGGTCGACTTGTCGGTCTAAAGCATCTGGATCTCTCAGATAACAACTTAACAGGAGAAGTTCCAGCGCAGTTCTTTTCAATTCCAATGTTCAACTTTTCAGGAACTGGTTTAAATTGTGGGTTTAGGTTGGATAAACCTTGTGTTTCGACATCTCCCCATCGAGCTTCTGCAAAGAATTCAAAGTTTGGGGTAGTGGCGAGTACTGCAAGTTGTGGGGGTTTCATACTTCTGTCAATTGGTGCCTTCTTTGCTTATAGATGCTTCTACATGCATAAGCTTAAGGATCCTATGTTTGTTGATGTTGCTGGTGAAGATGAATGTAAACTTTGCTTTGGGCAAATCAGAAGATTTTCATTGCGGGAAATCCAACTTGCTACCGATAACTTTAACGAAGCGAACATCATTGGCCAAGGAGGCTTTGGAAAAGTATATAAAGGCATCCTCTCGGATGCCTCCAAGGTGGCTGTGAAACGGTTAACAGACTACAATAGTCCTGGCGGGGAGGCTGCATTCCTAAGAGAAGTTCAACTGATAAGTGTTGCAGTGCATAGAAATCTCCTCCGATTGATTGGGTTCTGCACAACCACATCTGAGAGAATCCTCGTTTATCCATTCATGCAGAATCTTAGCGTGGCACATCGCTTGAGAGATTTAAAACCTGGAGAAAGAAGCTTGGACTGGGCCACGAGGAAACGAATTGCTTTCGGTGCAGCTCATGGTTTGGAGTATTTGCATGAGCACTGTAATCCTAAGATCATTCATCGCGATCTGAAGGCTGCGAATATCTTATTAGACGATGACTTTGAAGCTGTTCTTGGAGATTTCGGGCTGGCTAAGCTAGTTGATACTAAAGTGACTCATATTACCACTCAAGTGCGTGGTACGATGGGTCACATTGCCCCAGAATACCTGTCCACTGGAAAGTCGTCCGAAAAGACAGATGTTTTTGGATATGGTATCACCCTTCTTGAACTTGTCACTGGTCAGCGAGCAATAGATTTCTCCCGCCTCGAAGAGGAGGAAGATGTTCTTCTACTTGATCATATAAAGAAGTTGCAGAGGGAGAATAGGCTTGAAGATGTGGTGGACAAAAACTTAAGAAGCTACGATGAGAAAGAAGTCGAAAACATAGTTCAGGTGGCACTGCTTTGCACTCAAAGCTCACCCGAGGACCGACCCACAATGGCGGAAGTTGTGAATCTACTACATGGAGAAGGGCTGGCAGATAGGTGGGCAGAGTGGATGCAGCTTGAAGAGGGTTGTTGGGAGCATGGAAATGGAGACCTAGGACTGAGTAGCTCTGTCACTGTTGTCTGTCTCTCAAAAAATAGAGCAGATGGACATTTGATTGTGAATTGTGATGGCAAGAGCTTTAGGATACAATATATAGATATTGGTTCGTTCTTCTTCTCCTCCCTTGATCCTGTGGCTACTGCCGAATTCAATTTAATGTTATGGGGAGAAGTGTTTCAAGGTCTCCGTCGTACACTCACCGCTCCACTTCCCATCGCCATAGTCGGAGAAGCAGAAGGGACCGAACTCCTTCTCCCTATTACTCCAATTCCCATTCCAGGAGAAGGAGCCGTTCCACCTCCCTTCGCCGCCGTCGAAGTCCTTCCCCTTCCTACCGTCGTCGTAGAAGTCGCTCTCCCACTCCACGGAGACGCCGCCGACGCAGAAGTAGACAAGCTTAAGAAAGAGGAAGAAGAGAAGAAAAGGCGTGAAGAAGAGTCGAAGAAGTTAGAAGAAGATGCAGCTAGGAGGTTGGAAGAATTAATTCAGAAGAATGTTCAAGAAATACTAAACTCTGAAGAGACTAGATTAGAAATACGAAGGCGAATAGAGGAAGGTCGCAAGAAATTGTTTGATGATGTTCATCTGCAACTTGCGAAAGAGAAAGAAGCCGCTCTTACTGCTGCAAGACAGAAAGAAGAACAAGCCCGAAAAGAGAGAGAAGAGCTAGATAGAATGCTAGAAGAGAATAGGAGAAGGGTAGAAGAAGCTCAACGAAGAGAAGCTCTGGAGCTGCAGCGGAAGGAAGAAGAACGATATCGTGAGCTGGAGCTGATTCAGAGACAAAAAGAGGAGGCCGCACGGAGGAAAAAGCTGGAACAGGGAGAAGAGAGAACGTAG | 3396 | 44.76 | MSVENKFPKAGALMNKAAGRVLKLVGVGIGGGGGEQVSNCRVEARKEDPAETAEPWKKSDRRSIELEESLEKTRGEGGSLLTFFAWLGSARLGPAPPPIIVSVSTRLSLVTMIRYITVVGRHANKAIVSKILPREDMPYLQNGRPVDMVFNPLGVPSQMNGRRRAKQAVVLSTRYGNMDSAFMSSGEVEASLTLLKSMMLKAEAQRCHGNTDSNAHSHSDSTINWQQKEAAAHAQTPPYSLSHCFSHDFSQSHLAFSFSMLSFAASEAMPLSKGGTPMFSMLYRWNPLRLIIQGLLLFSLLRSNHASTDPDVEGEALVDLLGALNDSNHQITDWNYHLVSPCFSWSHITCRNGNVISLSLGSVGFSGSLSPSITKLKYLASLDLQNNNIAGVIPDYLANMTHLQNLNLANNNFNGPIPAAWGRLVGLKHLDLSDNNLTGEVPAQFFSIPMFNFSGTGLNCGFRLDKPCVSTSPHRASAKNSKFGVVASTASCGGFILLSIGAFFAYRCFYMHKLKDPMFVDVAGEDECKLCFGQIRRFSLREIQLATDNFNEANIIGQGGFGKVYKGILSDASKVAVKRLTDYNSPGGEAAFLREVQLISVAVHRNLLRLIGFCTTTSERILVYPFMQNLSVAHRLRDLKPGERSLDWATRKRIAFGAAHGLEYLHEHCNPKIIHRDLKAANILLDDDFEAVLGDFGLAKLVDTKVTHITTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRLEEEEDVLLLDHIKKLQRENRLEDVVDKNLRSYDEKEVENIVQVALLCTQSSPEDRPTMAEVVNLLHGEGLADRWAEWMQLEEGCWEHGNGDLGLSSSVTVVCLSKNRADGHLIVNCDGKSFRIQYIDIGSFFFSSLDPVATAEFNLMLWGEVFQGLRRTLTAPLPIAIVGEAEGTELLLPITPIPIPGEGAVPPPFAAVEVLPLPTVVVEVALPLHGDAADAEVDKLKKEEEEKKRREEESKKLEEDAARRLEELIQKNVQEILNSEETRLEIRRRIEEGRKKLFDDVHLQLAKEKEAALTAARQKEEQARKEREELDRMLEENRRRVEEAQRREALELQRKEEERYRELELIQRQKEEAARRKKLEQGEERT | 1131 |
Gff information

Chromosome | Start | End | Strand | Old_gene | Gene | Num |
---|---|---|---|---|---|---|
2 | 127174 | 147349 | - | CePI673135_02g000110.1 | Cec02g0011 | 195064 |
Annotation information

Select | Seq ID | Length | Analysis | Description | Start | End | IPR | GO |
---|---|---|---|---|---|---|---|---|
Cec02g0011 | 1131 | Gene3D | Ribonuclease Inhibitor | 310 | 470 | IPR032675 | - | |
Cec02g0011 | 1131 | SUPERFAMILY | beta and beta-prime subunits of DNA dependent RNA-polymerase | 119 | 160 | - | - | |
Cec02g0011 | 1131 | SUPERFAMILY | Protein kinase-like (PK-like) | 531 | 823 | IPR011009 | - | |
Cec02g0011 | 1131 | FunFam | Somatic embryogenesis receptor-like kinase 1 | 627 | 842 | - | - | |
Cec02g0011 | 1131 | ProSitePatterns | Serine/Threonine protein kinases active-site signature. | 673 | 685 | IPR008271 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec02g0011 | 1131 | Gene3D | - | 117 | 240 | IPR037033 | GO:0003677(InterPro)|GO:0003899(InterPro)|GO:0006351(InterPro) | |
Cec02g0011 | 1131 | MobiDBLite | consensus disorder prediction | 1064 | 1092 | - | - | |
Cec02g0011 | 1131 | Pfam | Leucine rich repeat | 379 | 437 | IPR001611 | GO:0005515(InterPro) | |
Cec02g0011 | 1131 | ProSiteProfiles | Protein kinase domain profile. | 550 | 836 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec02g0011 | 1131 | MobiDBLite | consensus disorder prediction | 982 | 1004 | - | - | |
Cec02g0011 | 1131 | Pfam | Leucine rich repeat N-terminal domain | 313 | 350 | IPR013210 | - | |
Cec02g0011 | 1131 | FunFam | Leucine-rich repeat receptor-like kinase | 312 | 421 | - | - | |
Cec02g0011 | 1131 | SUPERFAMILY | L domain-like | 314 | 449 | - | - | |
Cec02g0011 | 1131 | Pfam | Arginine and glutamate-rich 1 | 995 | 1130 | IPR033371 | - | |
Cec02g0011 | 1131 | Coils | Coil | 975 | 1027 | - | - | |
Cec02g0011 | 1131 | Gene3D | Phosphorylase Kinase; domain 1 | 519 | 626 | - | - | |
Cec02g0011 | 1131 | PANTHER | SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 | 300 | 847 | - | - | |
Cec02g0011 | 1131 | SMART | serkin_6 | 550 | 823 | IPR000719 | GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro) | |
Cec02g0011 | 1131 | FunFam | Somatic embryogenesis receptor kinase 1 | 519 | 626 | - | - | |
Cec02g0011 | 1131 | Gene3D | Transferase(Phosphotransferase) domain 1 | 627 | 841 | - | - | |
Cec02g0011 | 1131 | CDD | UDM1_RNF168_RNF169-like | 1069 | 1126 | - | - | |
Cec02g0011 | 1131 | Pfam | RNA polymerase Rpb2, domain 6 | 120 | 160 | IPR007120 | GO:0003677(InterPro)|GO:0003899(InterPro)|GO:0006351(InterPro) | |
Cec02g0011 | 1131 | Coils | Coil | 1048 | 1128 | - | - | |
Cec02g0011 | 1131 | Pfam | Protein tyrosine and serine/threonine kinase | 554 | 822 | IPR001245 | GO:0004672(InterPro)|GO:0006468(InterPro) | |
Cec02g0011 | 1131 | ProSitePatterns | Protein kinases ATP-binding region signature. | 556 | 578 | IPR017441 | GO:0005524(InterPro) |
Duplication type information

Select | Gene1 | Location1 | Gene2 | Location2 | E-value | Duplicated-type |
---|---|---|---|---|---|---|
Cec02g0011 | Cec-Chr2:127174 | Cec07g1841 | Cec-Chr7:34092787 | 2.10E-159 | dispersed | |
Cec05g2811 | Cec-Chr5:38417233 | Cec02g0011 | Cec-Chr2:127174 | 8.60E-17 | dispersed | |
Cec09g1528 | Cec-Chr9:25994405 | Cec02g0011 | Cec-Chr2:127174 | 2.30E-06 | dispersed | |
Cec02g0011 | Cec-Chr2:127174 | Cec07g1840 | Cec-Chr7:34073170 | 2.70E-167 | transposed |
Transcription factors information

Select | Gene | Hmm_acc | Hmm_name | Score | E-value | Regulatory Factors | Family |
---|---|---|---|---|---|---|---|
71713 | PF00069 | Pkinase | 1.40E-44 | CL0016 | Cec | PK |
Pathway information

Select | Query | KO | Definition | Second KO | KEGG Genes ID | GHOSTX Score |
---|---|---|---|---|---|---|
Cec02g0011 | - | - | - | 0.0 |