Gene search


Sequence information


Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0011 ATGAGTGTAGAAAATAAATTCCCTAAAGCAGGAGCATTAATGAATAAGGCAGCAGGCAGAGTGTTGAAACTTGTGGGTGTGGGCATTGGGGGAGGAGGTGGGGAGCAGGTAAGTAATTGTAGGGTGGAAGCTCGTAAAGAAGATCCGGCAGAGACCGCTGAGCCCTGGAAGAAGAGCGACAGACGGAGTATAGAATTAGAAGAGAGCTTGGAGAAAACGAGAGGAGAGGGCGGTTCTCTTCTCACATTTTTTGCATGGCTTGGCTCCGCTCGGCTTGGTCCGGCTCCGCCTCCTATTATCGTCTCAGTCTCAACGCGACTCTCTCTCGTTACTATGATACGTTACATTACTGTAGTGGGAAGACATGCAAATAAAGCTATTGTTTCAAAAATTTTGCCTAGAGAAGATATGCCTTATTTGCAAAATGGAAGACCGGTTGATATGGTTTTCAATCCATTAGGAGTCCCCTCACAAATGAATGGAAGGAGAAGGGCAAAGCAAGCAGTGGTTTTATCGACTCGTTATGGGAATATGGATAGTGCATTCATGTCCAGTGGAGAAGTGGAAGCTTCTTTGACTCTTTTAAAATCAATGATGTTAAAAGCAGAGGCTCAAAGGTGCCATGGGAACACAGATTCTAATGCTCATTCTCATTCGGATTCCACCATCAACTGGCAGCAGAAGGAAGCAGCAGCTCATGCTCAGACACCACCTTATTCTCTCTCTCATTGCTTTTCTCATGATTTTTCACAATCCCACCTTGCATTTTCATTCTCAATGCTTTCTTTTGCAGCCTCAGAAGCCATGCCTCTTTCTAAAGGAGGTACTCCTATGTTTTCAATGCTTTATAGATGGAACCCCTTAAGACTGATTATTCAGGGGCTGCTACTGTTCTCATTGTTGAGGTCGAATCATGCATCAACGGATCCAGATGTGGAAGGAGAAGCTTTGGTTGACTTGTTAGGGGCACTGAATGATTCCAATCATCAGATTACTGATTGGAATTATCATCTTGTAAGCCCTTGCTTTAGTTGGTCGCATATTACCTGCCGAAATGGAAATGTCATATCCTTGAGCTTGGGTTCAGTAGGATTTTCAGGATCACTTTCTCCCTCAATTACCAAACTGAAGTATTTGGCTAGCCTGGATTTGCAGAACAATAATATAGCTGGTGTTATACCAGATTATCTAGCTAACATGACCCACCTACAGAATTTGAATCTTGCTAATAATAACTTCAATGGCCCTATACCTGCAGCTTGGGGTCGACTTGTCGGTCTAAAGCATCTGGATCTCTCAGATAACAACTTAACAGGAGAAGTTCCAGCGCAGTTCTTTTCAATTCCAATGTTCAACTTTTCAGGAACTGGTTTAAATTGTGGGTTTAGGTTGGATAAACCTTGTGTTTCGACATCTCCCCATCGAGCTTCTGCAAAGAATTCAAAGTTTGGGGTAGTGGCGAGTACTGCAAGTTGTGGGGGTTTCATACTTCTGTCAATTGGTGCCTTCTTTGCTTATAGATGCTTCTACATGCATAAGCTTAAGGATCCTATGTTTGTTGATGTTGCTGGTGAAGATGAATGTAAACTTTGCTTTGGGCAAATCAGAAGATTTTCATTGCGGGAAATCCAACTTGCTACCGATAACTTTAACGAAGCGAACATCATTGGCCAAGGAGGCTTTGGAAAAGTATATAAAGGCATCCTCTCGGATGCCTCCAAGGTGGCTGTGAAACGGTTAACAGACTACAATAGTCCTGGCGGGGAGGCTGCATTCCTAAGAGAAGTTCAACTGATAAGTGTTGCAGTGCATAGAAATCTCCTCCGATTGATTGGGTTCTGCACAACCACATCTGAGAGAATCCTCGTTTATCCATTCATGCAGAATCTTAGCGTGGCACATCGCTTGAGAGATTTAAAACCTGGAGAAAGAAGCTTGGACTGGGCCACGAGGAAACGAATTGCTTTCGGTGCAGCTCATGGTTTGGAGTATTTGCATGAGCACTGTAATCCTAAGATCATTCATCGCGATCTGAAGGCTGCGAATATCTTATTAGACGATGACTTTGAAGCTGTTCTTGGAGATTTCGGGCTGGCTAAGCTAGTTGATACTAAAGTGACTCATATTACCACTCAAGTGCGTGGTACGATGGGTCACATTGCCCCAGAATACCTGTCCACTGGAAAGTCGTCCGAAAAGACAGATGTTTTTGGATATGGTATCACCCTTCTTGAACTTGTCACTGGTCAGCGAGCAATAGATTTCTCCCGCCTCGAAGAGGAGGAAGATGTTCTTCTACTTGATCATATAAAGAAGTTGCAGAGGGAGAATAGGCTTGAAGATGTGGTGGACAAAAACTTAAGAAGCTACGATGAGAAAGAAGTCGAAAACATAGTTCAGGTGGCACTGCTTTGCACTCAAAGCTCACCCGAGGACCGACCCACAATGGCGGAAGTTGTGAATCTACTACATGGAGAAGGGCTGGCAGATAGGTGGGCAGAGTGGATGCAGCTTGAAGAGGGTTGTTGGGAGCATGGAAATGGAGACCTAGGACTGAGTAGCTCTGTCACTGTTGTCTGTCTCTCAAAAAATAGAGCAGATGGACATTTGATTGTGAATTGTGATGGCAAGAGCTTTAGGATACAATATATAGATATTGGTTCGTTCTTCTTCTCCTCCCTTGATCCTGTGGCTACTGCCGAATTCAATTTAATGTTATGGGGAGAAGTGTTTCAAGGTCTCCGTCGTACACTCACCGCTCCACTTCCCATCGCCATAGTCGGAGAAGCAGAAGGGACCGAACTCCTTCTCCCTATTACTCCAATTCCCATTCCAGGAGAAGGAGCCGTTCCACCTCCCTTCGCCGCCGTCGAAGTCCTTCCCCTTCCTACCGTCGTCGTAGAAGTCGCTCTCCCACTCCACGGAGACGCCGCCGACGCAGAAGTAGACAAGCTTAAGAAAGAGGAAGAAGAGAAGAAAAGGCGTGAAGAAGAGTCGAAGAAGTTAGAAGAAGATGCAGCTAGGAGGTTGGAAGAATTAATTCAGAAGAATGTTCAAGAAATACTAAACTCTGAAGAGACTAGATTAGAAATACGAAGGCGAATAGAGGAAGGTCGCAAGAAATTGTTTGATGATGTTCATCTGCAACTTGCGAAAGAGAAAGAAGCCGCTCTTACTGCTGCAAGACAGAAAGAAGAACAAGCCCGAAAAGAGAGAGAAGAGCTAGATAGAATGCTAGAAGAGAATAGGAGAAGGGTAGAAGAAGCTCAACGAAGAGAAGCTCTGGAGCTGCAGCGGAAGGAAGAAGAACGATATCGTGAGCTGGAGCTGATTCAGAGACAAAAAGAGGAGGCCGCACGGAGGAAAAAGCTGGAACAGGGAGAAGAGAGAACGTAG 3396 44.76 MSVENKFPKAGALMNKAAGRVLKLVGVGIGGGGGEQVSNCRVEARKEDPAETAEPWKKSDRRSIELEESLEKTRGEGGSLLTFFAWLGSARLGPAPPPIIVSVSTRLSLVTMIRYITVVGRHANKAIVSKILPREDMPYLQNGRPVDMVFNPLGVPSQMNGRRRAKQAVVLSTRYGNMDSAFMSSGEVEASLTLLKSMMLKAEAQRCHGNTDSNAHSHSDSTINWQQKEAAAHAQTPPYSLSHCFSHDFSQSHLAFSFSMLSFAASEAMPLSKGGTPMFSMLYRWNPLRLIIQGLLLFSLLRSNHASTDPDVEGEALVDLLGALNDSNHQITDWNYHLVSPCFSWSHITCRNGNVISLSLGSVGFSGSLSPSITKLKYLASLDLQNNNIAGVIPDYLANMTHLQNLNLANNNFNGPIPAAWGRLVGLKHLDLSDNNLTGEVPAQFFSIPMFNFSGTGLNCGFRLDKPCVSTSPHRASAKNSKFGVVASTASCGGFILLSIGAFFAYRCFYMHKLKDPMFVDVAGEDECKLCFGQIRRFSLREIQLATDNFNEANIIGQGGFGKVYKGILSDASKVAVKRLTDYNSPGGEAAFLREVQLISVAVHRNLLRLIGFCTTTSERILVYPFMQNLSVAHRLRDLKPGERSLDWATRKRIAFGAAHGLEYLHEHCNPKIIHRDLKAANILLDDDFEAVLGDFGLAKLVDTKVTHITTQVRGTMGHIAPEYLSTGKSSEKTDVFGYGITLLELVTGQRAIDFSRLEEEEDVLLLDHIKKLQRENRLEDVVDKNLRSYDEKEVENIVQVALLCTQSSPEDRPTMAEVVNLLHGEGLADRWAEWMQLEEGCWEHGNGDLGLSSSVTVVCLSKNRADGHLIVNCDGKSFRIQYIDIGSFFFSSLDPVATAEFNLMLWGEVFQGLRRTLTAPLPIAIVGEAEGTELLLPITPIPIPGEGAVPPPFAAVEVLPLPTVVVEVALPLHGDAADAEVDKLKKEEEEKKRREEESKKLEEDAARRLEELIQKNVQEILNSEETRLEIRRRIEEGRKKLFDDVHLQLAKEKEAALTAARQKEEQARKEREELDRMLEENRRRVEEAQRREALELQRKEEERYRELELIQRQKEEAARRKKLEQGEERT 1131
       

Gff information


Chromosome Start End Strand Old_gene Gene Num
2 127174 147349 - CePI673135_02g000110.1 Cec02g0011 195064
       

Annotation information


Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0011 1131 Gene3D Ribonuclease Inhibitor 310 470 IPR032675 -
Cec02g0011 1131 SUPERFAMILY beta and beta-prime subunits of DNA dependent RNA-polymerase 119 160 - -
Cec02g0011 1131 SUPERFAMILY Protein kinase-like (PK-like) 531 823 IPR011009 -
Cec02g0011 1131 FunFam Somatic embryogenesis receptor-like kinase 1 627 842 - -
Cec02g0011 1131 ProSitePatterns Serine/Threonine protein kinases active-site signature. 673 685 IPR008271 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g0011 1131 Gene3D - 117 240 IPR037033 GO:0003677(InterPro)|GO:0003899(InterPro)|GO:0006351(InterPro)
Cec02g0011 1131 MobiDBLite consensus disorder prediction 1064 1092 - -
Cec02g0011 1131 Pfam Leucine rich repeat 379 437 IPR001611 GO:0005515(InterPro)
Cec02g0011 1131 ProSiteProfiles Protein kinase domain profile. 550 836 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0011 1131 MobiDBLite consensus disorder prediction 982 1004 - -
Cec02g0011 1131 Pfam Leucine rich repeat N-terminal domain 313 350 IPR013210 -
Cec02g0011 1131 FunFam Leucine-rich repeat receptor-like kinase 312 421 - -
Cec02g0011 1131 SUPERFAMILY L domain-like 314 449 - -
Cec02g0011 1131 Pfam Arginine and glutamate-rich 1 995 1130 IPR033371 -
Cec02g0011 1131 Coils Coil 975 1027 - -
Cec02g0011 1131 Gene3D Phosphorylase Kinase; domain 1 519 626 - -
Cec02g0011 1131 PANTHER SOMATIC EMBRYOGENESIS RECEPTOR KINASE 1 300 847 - -
Cec02g0011 1131 SMART serkin_6 550 823 IPR000719 GO:0004672(InterPro)|GO:0005524(InterPro)|GO:0006468(InterPro)
Cec02g0011 1131 FunFam Somatic embryogenesis receptor kinase 1 519 626 - -
Cec02g0011 1131 Gene3D Transferase(Phosphotransferase) domain 1 627 841 - -
Cec02g0011 1131 CDD UDM1_RNF168_RNF169-like 1069 1126 - -
Cec02g0011 1131 Pfam RNA polymerase Rpb2, domain 6 120 160 IPR007120 GO:0003677(InterPro)|GO:0003899(InterPro)|GO:0006351(InterPro)
Cec02g0011 1131 Coils Coil 1048 1128 - -
Cec02g0011 1131 Pfam Protein tyrosine and serine/threonine kinase 554 822 IPR001245 GO:0004672(InterPro)|GO:0006468(InterPro)
Cec02g0011 1131 ProSitePatterns Protein kinases ATP-binding region signature. 556 578 IPR017441 GO:0005524(InterPro)
       

Duplication type information


Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0011 Cec-Chr2:127174 Cec07g1841 Cec-Chr7:34092787 2.10E-159 dispersed
Cec05g2811 Cec-Chr5:38417233 Cec02g0011 Cec-Chr2:127174 8.60E-17 dispersed
Cec09g1528 Cec-Chr9:25994405 Cec02g0011 Cec-Chr2:127174 2.30E-06 dispersed
Cec02g0011 Cec-Chr2:127174 Cec07g1840 Cec-Chr7:34073170 2.70E-167 transposed
       

Transcription factors information


Select Gene Hmm_acc Hmm_name Score E-value Regulatory Factors Family
71713 PF00069 Pkinase 1.40E-44 CL0016 Cec PK
       

Pathway information


Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0011 - - - 0.0