Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0028 ATGTGGTCGGAGAGGCGACAAAAGGAGGGAGACGGAGGTCAGAGAGGTTTGAGATGGAAAATTAGATACGGCGTGAAGATGGAAGGTGGATGGAAAACAAACAAGGGGTGTTTCGGGGAGAGAGAAAATAGCGAACAAACGGGGCGGTGGAAGGAGGAGAACGACGGTGGTTGTCGGAGCTCGGCGATGATCGGAGCTGTTGTGGTTGCTATTCCAGTTTGTTTTGGAGCTAAACTTTTGTTCGCTTGGTCCTTTTTGGTTCTTGGCACTCTTTTGTTTATTCTATTTAAGCACTTGCAGGAGAAGCTTCTTCTCACTGAGACAAAATTGAAGGAGTCCCAGTATCAATTGGCACCTTGGCGTTCTGATGCAAGTCACTCGAGTTTTGCACCACAGTCACCCTTCCATTCTATTGGTGCAACCTTGACCGCTTCAACTAAAAATGGCCTTGAATTGGTTCCTCAACCTTCGTACTGGAATGGAAAGATGCCAGTTTCTTCTTCTGATGCTCAGACCACAGCTGATTGGGATCTATCAACTCATCATCAGATTGGTTTAGGTGTTGGTGTTGCAAAAAAGTTGGAACCAGATGATTTGGGGAGGTATTCACATCATGCAAGCAGTGAGGGAACAAACAAGCAGGTGACATTCCGTGAACCTGTAAGCAATAGTGAGATTGATGACCAGGATGTGGTCCACCAAACAGAGAGAGAAACTATCACCAACTGGAGTTCTGGGCAATCCCCTCCTCCTGCCACTTTTGATGAGCCAAGCTCTTCTCATTCTCCAATTCTGCCTCCAGTCCTCGAGGAACCTTCACCTTCATTTTCTGAAGATGATGATCCATTACCAGGTATTGAGGCCCTTCAAATATCTGGCGAAGCTTTTCCAGGACAAGATCTCCAAGCATGTGGATACTCAATTAATGGAACAACTAGCTGTAATTTTGAGTGGGTACGCCATTTGGAAGATGGATCTGTAAATTACATTGAAGGGGCGAAGCAACCAAACTATCGTGTTACTGCGGATGATGTTGACACCTATCTGGCTATCGAAGTCCAGCCTTTGGATAACAGAAGGCGCAAGGGAGGGCTTGTAAAGGTTTATGCCAATGACCACCGAAAGATAACTTGTGATCCTGAAATGCAGAACCATATAGAGAAGACTCTGTATAGTGGTCATGCATCATATAAAGTATCCATGTCGGCTGGATATCTTGATATATGGGAAGCAGCTACATTGTCCATCAAAAGGGAAGGATACAGTATAAAATGTAGTGGGTCTAGTGGTGATGTCATCACAGAAAAGTTTTCTCCAAATACAATTGTTTCAATTCCATTTGGACAGCCGTATGAGTTTATAATAACTGGTCCGAACAATGTTGAGCATCACTTGCGAGTGGACAGTAATTCTGCTGATATTAGCTGTTTCAGAGATACCATTGTGCTAACCTTGAGATTATTTATTCTAAGGGCTAGCGAGAGAAGAAAAGGAAAAAAGCGAGTTTTGTTCTTTCACAACGGTTGCATTGCAAAGGGAACTTTGAATTTATCTTCGAGGGAGCTTCTTCTTGATTTTTCAAAGGTTTATCCTCTGCTTAGGCTTATGTTTGAGAACTCATGTGAAATTGGGGTTTTCTCCAAGCTCACTAATGCTTACTGCCTGGTTGCAATTGGTGGCTCTGAGAATTTCTACAGTACGTTCGAAACTGAATTAGGGGGTGTCATTCCGGTCGTTAAAACATCTATTGATGGCACTCGCATTATTGGCCGTCTATGTGCTGGAAACAAAAATGGGCTTCTTGTACCACACACCACTACTGACCAAGAACTTCAGCACTTGAGGAACAGCCTACCTGACCAAGTTGTTGTTCAACGTATACAAGAGAGATTGTCTGCTCTGGGGAATACCATTGCTTGTAATGATCATGTTGCTCTCACACATACTGATCTTGATCGGGAAACTGAAGAGCTCATTGCTGATGTTCTTGGAGTGGAGGTCTTTAGGCAGACAGTAGCGGGCAACGTCCTTGTGGGAAGCTACTGTAGCTTCACGAATAGGGGTGGCTTGGTTCATCCACATACGTCTGTTGAAGATCTGGATGAGCTATCAACCCTTCTTCAGGTCCCTTTAGTTGCTGGAACCGTGAATCGTGGAAGTGAAGTGATTGCTGCTGGATTGACAGCAAATGATTGGACTGCGTTTTGTGGTTCGGACACCACGGCCACCGAGTTATCGGTCATCGAGAGTGTTTTCAAATTGAGGGAGGCTCAACCAAGTTCCATTGTTGAAGAAATGAGGAAGTCGCTAATAGATAGTTACGTATGA 2328 44.37 MWSERRQKEGDGGQRGLRWKIRYGVKMEGGWKTNKGCFGERENSEQTGRWKEENDGGCRSSAMIGAVVVAIPVCFGAKLLFAWSFLVLGTLLFILFKHLQEKLLLTETKLKESQYQLAPWRSDASHSSFAPQSPFHSIGATLTASTKNGLELVPQPSYWNGKMPVSSSDAQTTADWDLSTHHQIGLGVGVAKKLEPDDLGRYSHHASSEGTNKQVTFREPVSNSEIDDQDVVHQTERETITNWSSGQSPPPATFDEPSSSHSPILPPVLEEPSPSFSEDDDPLPGIEALQISGEAFPGQDLQACGYSINGTTSCNFEWVRHLEDGSVNYIEGAKQPNYRVTADDVDTYLAIEVQPLDNRRRKGGLVKVYANDHRKITCDPEMQNHIEKTLYSGHASYKVSMSAGYLDIWEAATLSIKREGYSIKCSGSSGDVITEKFSPNTIVSIPFGQPYEFIITGPNNVEHHLRVDSNSADISCFRDTIVLTLRLFILRASERRKGKKRVLFFHNGCIAKGTLNLSSRELLLDFSKVYPLLRLMFENSCEIGVFSKLTNAYCLVAIGGSENFYSTFETELGGVIPVVKTSIDGTRIIGRLCAGNKNGLLVPHTTTDQELQHLRNSLPDQVVVQRIQERLSALGNTIACNDHVALTHTDLDRETEELIADVLGVEVFRQTVAGNVLVGSYCSFTNRGGLVHPHTSVEDLDELSTLLQVPLVAGTVNRGSEVIAAGLTANDWTAFCGSDTTATELSVIESVFKLREAQPSSIVEEMRKSLIDSYV 775
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 290212 310752 + CePI673135_02g000280.1 Cec02g0028 195081
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0028 775 MobiDBLite consensus disorder prediction 38 56 - -
Cec02g0028 775 Gene3D - 285 363 - -
Cec02g0028 775 SMART eIF6neu2 533 734 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cec02g0028 775 MobiDBLite consensus disorder prediction 205 222 - -
Cec02g0028 775 FunFam Eukaryotic translation initiation factor 6 532 755 - -
Cec02g0028 775 Hamap Translation initiation factor 6 [eif6]. 520 775 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cec02g0028 775 NCBIfam translation initiation factor IF-6 534 754 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cec02g0028 775 MobiDBLite consensus disorder prediction 38 57 - -
Cec02g0028 775 MobiDBLite consensus disorder prediction 199 283 - -
Cec02g0028 775 Pfam eIF-6 family 534 733 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cec02g0028 775 Gene3D - 532 755 - -
Cec02g0028 775 PANTHER EXPRESSED PROTEIN 94 494 - -
Cec02g0028 775 SUPERFAMILY Pentein 533 754 - -
Cec02g0028 775 MobiDBLite consensus disorder prediction 236 260 - -
Cec02g0028 775 CDD IF6 532 753 IPR002769 GO:0042256(InterPro)|GO:0043022(InterPro)
Cec02g0028 775 FunFam Transmembrane protein 284 365 - -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0028 Cec-Chr2:290212 Cec06g1379 Cec-Chr6:27296889 1.60E-134 dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0028 K03264 - csv:101216431 779.245