Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0065 ATGCTCCCCAGAAAACCCCCATTCCCTTTCCCCATTTCCAAATCCACTCTCCTTTTCCTCTCCATGGCTTCCCTCTCTTTCCTCTCTTTCCTCTCCCTCTTCTTCTTCTTCCTCTCTCTCTCCTCCTCCTCCTCCTCTGCCGCTCGCCATCGCCAGCACCACCTCCCAACCCTTTTCACCAACCCCCCTTCCACCGACGACGTCATCCTTCACGCCTGTAAGGCCACCCGTTTTCCCGATCAATGCGGATCTTCCCTCTCTCACTCCTCCTCTCTCCCTCCCAATCCTACCCCTCTCCAGATCCTCCAATCCGCCGTCGCCCTCTCATCCGACGGTTTAGCCACTGCTCAATCCATGGTTAACCAGATTCTCGATTCCTCCGCCAAGAATCTCAATCGGACCACCGCTGCCAAGAACTGCCTTGAGGTACTGCGGAATTCCGATTACCGTATTTCTCTCACCAACGACGCTCTCCGCCGTGGTCGGACCAAGGACGCCCGCGCCTGGCTGAGTGCGTCCCTACTTTACCATTACGATTGCTGGTCTGCGCTCAAGTATGCTAACGACACTCAATTGGTTGACAAAACCATGGCGTTTCTCGATTCTCTTATTGGTCTCTCCAGCAACGCGCTGAGTATGTTGGTGGCTTACGACATTTCCGGAAACGATACGGCGGCGTGGACGCCGCCGAGGACGGAGCGGGATGGGTTTTGGGAAGGCGGTGGTGGCGGATCTGGGTTGGGGTTTAGCGGTGGGTTTCCGTCGAAGGTAGCGGCTGATGCGACGGTGTGCAAGGATGGCGCTGGGGGATGTTATAAAACTGTTCAGGAAGCTGTTAACGCGGCGCCGGAGAATGCGGCGGCGCGTAGGTTTGTGATTCATATTAAGGAAGGTGTTTATGAGGAAATCGTGAGGGTTCCGTTAGAGAAGAAGAATGTGGTGTTTTTAGGAGATGGAATGGGCAAAACGGTCATTACGGGCTCACTTAATATGGGCCAGCCTGGGATTTCCACTTACAACACCGCCACCGTTGGAGTACTTGGTGATGGATTCATGGCTAGTGGTCTCACCATTCAAAACACAGCAGGGCCAGATGCTCATCAAGCTGTGGCTTTTAGATCAGATAGTGATCTCTCAGTCATTCAAGATTGTGAGTTTCTAGGCAATCAAGACACTCTCTATGCTCACTCCCTTCGCCAATTCTACAAATCTTGTAAGATTCAAGGCAATGTAGATTTCATCTTTGGAAACTCAGCTTCCATCTTCCAAGACTGCGAGATCCTAGTTCGCCCCAGACAGCTCAAGCCTGAGAAAGGTGAAAACAATGCCATCACTGCTCAGGGCAGGACCGACCCTGCTCAAGCGACAGGTTTCGTATTCCAAAACTGCCTCATAAATGGCACTCAGGAGTACATGTCATTATACTACAGCAAGCCTAAAGTGCATAAAAACTACTTGGGGAGACCATGGAAGGAGTACTCGAGGACAGTTTTTATACATTGTACTCTCGAGGCTCTTGTCACGCCTGCGGGGTGGATGCCATGGAGTGGGGATTTTGCACTGAAGACTCTTTTCTATGGAGAGTTTGAGAATTCGGGAGCGGGGTCGAAGACATCAGAGAGAGTCGGGTGGAGTAGTCAGATTCCAGCACAACATGTTTTTAGTTACTCTGTTCAGAATTTCATTCAGGGAGATGAATGGATTCCTTCATCTCAGTCATCTAATGAACCAAAAACGTTGAACAAGAAAAGTAAAGATGTGAAATTATATTAG 1773 50.59 MLPRKPPFPFPISKSTLLFLSMASLSFLSFLSLFFFFLSLSSSSSSAARHRQHHLPTLFTNPPSTDDVILHACKATRFPDQCGSSLSHSSSLPPNPTPLQILQSAVALSSDGLATAQSMVNQILDSSAKNLNRTTAAKNCLEVLRNSDYRISLTNDALRRGRTKDARAWLSASLLYHYDCWSALKYANDTQLVDKTMAFLDSLIGLSSNALSMLVAYDISGNDTAAWTPPRTERDGFWEGGGGGSGLGFSGGFPSKVAADATVCKDGAGGCYKTVQEAVNAAPENAAARRFVIHIKEGVYEEIVRVPLEKKNVVFLGDGMGKTVITGSLNMGQPGISTYNTATVGVLGDGFMASGLTIQNTAGPDAHQAVAFRSDSDLSVIQDCEFLGNQDTLYAHSLRQFYKSCKIQGNVDFIFGNSASIFQDCEILVRPRQLKPEKGENNAITAQGRTDPAQATGFVFQNCLINGTQEYMSLYYSKPKVHKNYLGRPWKEYSRTVFIHCTLEALVTPAGWMPWSGDFALKTLFYGEFENSGAGSKTSERVGWSSQIPAQHVFSYSVQNFIQGDEWIPSSQSSNEPKTLNKKSKDVKLY 590
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 611801 614358 + CePI673135_02g000650.1 Cec02g0065 195118
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0065 590 Gene3D Invertase/pectin methylesterase inhibitor family protein 65 216 IPR035513 -
Cec02g0065 590 CDD PMEI-like_3 72 213 - -
Cec02g0065 590 Pfam Plant invertase/pectin methylesterase inhibitor 69 213 IPR006501 GO:0004857(InterPro)
Cec02g0065 590 MobiDBLite consensus disorder prediction 568 590 - -
Cec02g0065 590 FunFam Probable pectinesterase/pectinesterase inhibitor 51 67 216 - -
Cec02g0065 590 PANTHER PECTINESTERASE 32 570 - GO:0030599(PANTHER)|GO:0046910(PANTHER)
Cec02g0065 590 SUPERFAMILY Plant invertase/pectin methylesterase inhibitor 67 213 IPR035513 -
Cec02g0065 590 SUPERFAMILY Pectin lyase-like 257 570 IPR011050 -
Cec02g0065 590 SMART PMEI_2 64 213 IPR006501 GO:0004857(InterPro)
Cec02g0065 590 FunFam Pectinesterase 254 578 - -
Cec02g0065 590 NCBIfam pectinesterase inhibitor domain 31 213 IPR006501 GO:0004857(InterPro)
Cec02g0065 590 Gene3D - 254 577 IPR012334 -
Cec02g0065 590 Pfam Pectinesterase 260 565 IPR000070 GO:0030599(InterPro)|GO:0042545(InterPro)
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec02g0065 Cec-Chr2:611801 Cec05g0879 Cec-Chr5:7607139 8.70E-85 dispersed
Cec02g0064 Cec-Chr2:608126 Cec02g0065 Cec-Chr2:611801 6.20E-103 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0065 - - - 0.0