Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Cec02g0085 ATGGCAAAATCACCAGAAGATGAACACCCAATCAAGGCTTTCGGATGGGCTGCCCGAGATACATCCGGGTTACTCTCCCCCTTCCATTTCTCTAGAAGGGAAAATCGTGATGATGATGTCAGTATCAAAGTCCTTTACTGTGGGGTTTGCCATTCTGATCTACATTTGCTCAAGAATGATTGGGGTGTCACAAATTATCCAATTGTCCCAGGGCATGAGATTGTCGGTGTTGTGACCTCTGTTGGAAAGAATGTGAAGAAATTCAAAGCAGGCGATCAAGTTGGGGTTGGTGTCATAGTTGGATCTTGCAGAAGTTGTGAAAATTGTGAACAAGACTTGGAGAATTACTGCCCCAAGATGACATATACTTACAACTCACATTCATCTGATGGAGAAAAGACTTATGGTGGTTATTCTGATAAGATCGTTGTTGATCAGCATTTCGTGCTCCGATTTCCTGACAACTTACCCCTTGATGCTGGAGCTCCACTTCTTTGCGCTGGAATCACAATTTATAGCCCTATGAAATACTATGCAATGACTGAATCTGGTAAGCATTTGGGTGTGGTTGGTCTTGGTGGGCTTGGTCATGTTGCTGTTAAGTTTGGTAAGGCATTTGGGTTGAAAGTTACTGTCATTAGTACCTCTCCAAGAAAGAAGGAGGAAGCCATTGACAGGCTCGGTGCCGATGCTTTCGTTGTTTCAAGTGATCCCCCACAATTAAAGGCCGCCATGGGGACGATGGATTACATTATCGACACGGTATCCGCTATCCATGCTCTTGCTCCATTGCTTGGTCTGCTAAAACTGAATGGAAAGTTGGTCACTGTGGGTTTACCTAACAAGCCCCTTGAGCTGCCAGTTGCTTCTCTAGTTCTCGGTAGGAGGATGGTTGGTGGAAGCAACTTTGGAGGGCTGAAAGAGACACAAGAGATGCTGGATTTCTGTGCTCAGCACAACATCACAGCAGAGATTGAGCTCATTAAGATGGATGAAATTAACAAGGCCATCGAAAGACTTGCAAAAGCCGATGTTCGATACCGGTTCGTGATAGACATTGCAAACTCCTTGAAATAG 1077 44.75 MAKSPEDEHPIKAFGWAARDTSGLLSPFHFSRRENRDDDVSIKVLYCGVCHSDLHLLKNDWGVTNYPIVPGHEIVGVVTSVGKNVKKFKAGDQVGVGVIVGSCRSCENCEQDLENYCPKMTYTYNSHSSDGEKTYGGYSDKIVVDQHFVLRFPDNLPLDAGAPLLCAGITIYSPMKYYAMTESGKHLGVVGLGGLGHVAVKFGKAFGLKVTVISTSPRKKEEAIDRLGADAFVVSSDPPQLKAAMGTMDYIIDTVSAIHALAPLLGLLKLNGKLVTVGLPNKPLELPVASLVLGRRMVGGSNFGGLKETQEMLDFCAQHNITAEIELIKMDEINKAIERLAKADVRYRFVIDIANSLK 358
       

Gff information

Chromosome Start End Strand Old_gene Gene Num
2 836459 839285 + CePI673135_02g000850.1 Cec02g0085 195138
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Cec02g0085 358 FunFam probable cinnamyl alcohol dehydrogenase 16 181 - -
Cec02g0085 358 Gene3D - 167 323 - -
Cec02g0085 358 SUPERFAMILY GroES-like 9 199 IPR011032 -
Cec02g0085 358 FunFam Cinnamyl alcohol dehydrogenase 167 323 - -
Cec02g0085 358 ProSitePatterns Zinc-containing alcohol dehydrogenases signature. 71 85 IPR002328 GO:0008270(InterPro)|GO:0016491(InterPro)
Cec02g0085 358 Gene3D - 16 353 - -
Cec02g0085 358 SMART PKS_ER_names_mod 23 351 IPR020843 GO:0016491(InterPro)
Cec02g0085 358 PANTHER ALDEHYDE REDUCTASE 5 356 IPR047109 GO:0009809(PANTHER)|GO:0016616(PANTHER)|GO:0016616(InterPro)|GO:0045551(PANTHER)
Cec02g0085 358 Pfam Alcohol dehydrogenase GroES-like domain 37 154 IPR013154 -
Cec02g0085 358 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 156 321 IPR036291 -
Cec02g0085 358 CDD CAD1 14 352 IPR047109 GO:0016616(InterPro)
Cec02g0085 358 Pfam Zinc-binding dehydrogenase 194 317 IPR013149 -
       

Duplication type information

Select Gene1 Location1 Gene2 Location2 E-value Duplicated-type
Cec01g0125 Cec-Chr1:1133094 Cec02g0085 Cec-Chr2:836459 1.10E-103 dispersed
Cec02g0085 Cec-Chr2:836459 Cec04g1521 Cec-Chr4:34726967 5.80E-148 dispersed
Cec02g0084 Cec-Chr2:821300 Cec02g0085 Cec-Chr2:836459 8.20E-179 tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Cec02g0085 K00083 - csv:101205228 598.201